FFCP PHASE1:Hg19::chr15:45753525..45753567,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:45753525..45753567,+ | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_at_chr15:45753525..45753567,+ | |description=CAGE_peak_at_chr15:45753525..45753567,+ | ||
|id=chr15:45753525..45753567,+ | |id=chr15:45753525..45753567,+ | ||
|ontology_enrichment_celltype=CL:0002057!7.29e-37!42;CL:0000860!5.54e-35!45;CL:0000766!1.73e-31!76;CL:0002009!6.31e-29!65;CL:0002194!1.27e-28!63;CL:0000576!1.27e-28!63;CL:0000040!1.27e-28!63;CL:0000559!1.27e-28!63;CL:0000557!3.95e-25!71;CL:0000839!3.36e-24!70;CL:0000738!6.22e-21!140;CL:0000763!3.39e-20!112;CL:0000049!3.39e-20!112;CL:0002087!1.47e-17!119;CL:0000988!2.44e-15!182;CL:0000037!1.53e-14!172;CL:0000566!1.53e-14!172;CL:0002031!2.24e-14!124;CL:0002032!1.13e-13!165;CL:0000837!1.13e-13!165;CL:0000081!1.59e-08!11;CL:0000094!6.05e-08!8;CL:0000080!2.95e-07!6 | |ontology_enrichment_celltype=CL:0002057!7.29e-37!42;CL:0000860!5.54e-35!45;CL:0000766!1.73e-31!76;CL:0002009!6.31e-29!65;CL:0002194!1.27e-28!63;CL:0000576!1.27e-28!63;CL:0000040!1.27e-28!63;CL:0000559!1.27e-28!63;CL:0000557!3.95e-25!71;CL:0000839!3.36e-24!70;CL:0000738!6.22e-21!140;CL:0000763!3.39e-20!112;CL:0000049!3.39e-20!112;CL:0002087!1.47e-17!119;CL:0000988!2.44e-15!182;CL:0000037!1.53e-14!172;CL:0000566!1.53e-14!172;CL:0002031!2.24e-14!124;CL:0002032!1.13e-13!165;CL:0000837!1.13e-13!165;CL:0000081!1.59e-08!11;CL:0000094!6.05e-08!8;CL:0000080!2.95e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.72e-84;33!CL:0002057;2.72e-84;33!CL:0000473;6.49e-66;39!CL:0000234;6.49e-66;39!CL:0000576;9.44e-46;48!CL:0000766;7.24e-34;69!CL:0000763;1.88e-15;100!CL:0000094;6.42e-14;8!CL:0002087;1.58e-13;104!CL:0000081;3.17e-13;11!CL:0000738;8.66e-12;136!CL:0000775;2.15e-10;3!CL:0000226;6.47e-10;3!CL:0000842;6.47e-10;3!CL:0000771;2.27e-07;2!CL:0000988;3.21e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.54e-86,42;CL:0002057,1.54e-86,42;CL:0000473,1.33e-83,48;CL:0000234,1.33e-83,48;CL:0000766,5.99e-72,72;CL:0002009,3.05e-66,61;CL:0002194,6.06e-65,59;CL:0000576,6.06e-65,59;CL:0000040,6.06e-65,59;CL:0000559,6.06e-65,59;CL:0000557,1.58e-59,67;CL:0000839,3.79e-57,66;CL:0000763,4.76e-47,108;CL:0000049,4.76e-47,108;CL:0000738,3.08e-45,136;CL:0002087,8.85e-39,115;CL:0000037,1.79e-34,168;CL:0000988,9.85e-34,177;CL:0002031,7.41e-33,120;CL:0002032,2.62e-31,161;CL:0000837,2.62e-31,161;CL:0000094,5.71e-14,8;CL:0000134,1.84e-13,354;CL:0000081,3.09e-13,11;CL:0002320,5.72e-13,361;CL:0000219,3.07e-11,386;CL:0000775,2.05e-10,3;CL:0000226,8.59e-10,3;CL:0000842,8.59e-10,3;CL:0000048,3.93e-09,427;CL:0000034,4.27e-09,441;CL:0000723,7.65e-09,433;CL:0000771,2.09e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;9.11e-64;42!CL:0000049;4.41e-13;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4468;7.46e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,8.98e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0002371!1.51e-20!80;UBERON:0002390!2.54e-19!102;UBERON:0003061!2.54e-19!102;UBERON:0001474!4.67e-18!86;UBERON:0002193!8.44e-18!112;UBERON:0004765!8.46e-15!101;UBERON:0001434!8.46e-15!101;UBERON:0002405!8.25e-14!115;UBERON:0002294!1.58e-07!7;UBERON:0001173!1.58e-07!7;UBERON:0004912!1.58e-07!7 | |ontology_enrichment_uberon=UBERON:0002371!1.51e-20!80;UBERON:0002390!2.54e-19!102;UBERON:0003061!2.54e-19!102;UBERON:0001474!4.67e-18!86;UBERON:0002193!8.44e-18!112;UBERON:0004765!8.46e-15!101;UBERON:0001434!8.46e-15!101;UBERON:0002405!8.25e-14!115;UBERON:0002294!1.58e-07!7;UBERON:0001173!1.58e-07!7;UBERON:0004912!1.58e-07!7 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.04e-51,76;UBERON:0001474,5.45e-47,82;UBERON:0002390,7.94e-45,98;UBERON:0003061,7.94e-45,98;UBERON:0004765,5.38e-42,90;UBERON:0002405,2.42e-40,93;UBERON:0002193,9.17e-40,108;UBERON:0001434,7.20e-37,100;UBERON:0002204,2.46e-18,167;UBERON:0003081,1.41e-17,203;UBERON:0002384,2.68e-12,371;UBERON:0000926,4.43e-12,315;UBERON:0004120,4.43e-12,315;UBERON:0006603,4.43e-12,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0,0,0,0.767658796194425,2.32224184974114,0,0,0,0,0,0,10.5259127621057,139.177846544278,29.29646754664,0,0,0,7.56070841653736,15.1150377475524,5.82201746850759,26.496910207248,41.1167888021826,32.5191689439859,25.8923153089935,24.3352671202646,8.74984250587765,58.2620200444885,82.6220394987297,12.1883837934908,32.9424094199558,48.3043885602387,6.96642801779762,85.0913220791109,31.1301156263811,68.4090724604974,1.9791078011203,23.9356389145958,12.7867425159808,151.199013325492,60.1428338172608,93.4233373493363,19.0948985595125,75.093540252509,10.8594422352558,62.9615482738703,26.8842674270922,13.9243450473989,0,0.637812899895131,0,0,0.450530678524519,1.6072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68152568894461,0,0.393419540227666,0,0.822405995998037,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.58902087180316,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0,0,0.220587945464788,0.217879444092406,0,0.134831308160164,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0.514703430895577,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0.761016608938393,0,0,0.246217006087397,1.63802985597466,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.428933980974443,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,1.14861935834114,0,0,0,0,0,2.1673383622212,0,1.92514554419623,0.76228387266739,0,0.773288812777695,0,0,18.7251755986796,5.9832291840805,3.72973962092432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.10152039184331,1.07857100409308,4.37582986994122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0.15403067420883,0,0,0.949964660035881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.658589785919804,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0.677167111206413,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0.445773537109913,0,0,0,0,0,0.140669416410513,0,0,0,0,0.276283915531148,0.503865495708552,0.20453736500431,0.369254416383208,0,0.718946809178615,0.716084698702437,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0.508507300585533,0.472775363535873,0.344743373241465,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0.113942055847001,0,0,0.977826347298073,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,1.26598838716816,1.14262965711403,0,0,0.995261931078505,0.265372693510018,0,0.296521128680622,0.494255755786011,0.835375596043643,0.269604531922708,0,0,0,0,0,1.18375320854817,0,0,0.189559738885464,0,0,0,0,0.627865836814451,0,0.853828638089378,0,0,0.979923974143776,0,0,0,0,0.0730893170861856,0,0.0969890164884194,0,0.451961481561065,0,0.397429223405979,0,0.782205530939212,1.84365286578528,0.213452994739353,0,0,0,0,0,0.124252535565433,0.235694034616795,0,0,0,0,0,0.136905378891993,0,0,0,0,0.229160424011684,0,0.199679000498991,0,0,0,0.360299883542404,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,3.82455615637551,0,0,0,0,0,0.211200673038813,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533937062838473,2.04365596629566,0.414239055347196,0,0.197611631897944,0,0.638341257770182,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,6.29724357029046,0,0,0,0,0,0,0,0,0.107410557042488,0,1.19428766609585,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0.303859956177382,0.138258436151731,0.194860308839388,0,0.327130788511688,0,0,0,0.59996218756479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0.0642292250964595,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0.40341013740704,0.781514011233092,0,0.655087670040387,3.252833896775,0,0,0.413373593002368,0,0,0,0,0,3.19406069098988,0,0.336283722218824,0,0,0,0.115233987555779,0,0,0,0.354581522651905,0.222462803784138,0,0.157115589916002,0,0.913158720509496,0.215927591218621,18.1545641397079,0,0,0,0,0,0,0,0.691259661814092,0,0.118332000730565,0,0,1.14553434272025,0,0,0.335566295393377,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0.892769693028288,0,0,0.730336388246517,0,0,0,0,0.436350690340377,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,2.94760543171796,0,0.20686599172379,0.213233981900981,0,0,0.0620747142958579,0,0,0,0.435433495793923,0.342233301085281,0.202056159043763,0.573777643141411,0,1.54666210360852,0.106727345877715,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0,0,0,0.767658796194425,2.32224184974114,0,0,0,0,0,0,10.5259127621057,139.177846544278,29.29646754664,0,0,0,7.56070841653736,15.1150377475524,5.82201746850759,26.496910207248,41.1167888021826,32.5191689439859,25.8923153089935,24.3352671202646,8.74984250587765,58.2620200444885,82.6220394987297,12.1883837934908,32.9424094199558,48.3043885602387,6.96642801779762,85.0913220791109,31.1301156263811,68.4090724604974,1.9791078011203,23.9356389145958,12.7867425159808,151.199013325492,60.1428338172608,93.4233373493363,19.0948985595125,75.093540252509,10.8594422352558,62.9615482738703,26.8842674270922,13.9243450473989,0,0.637812899895131,0,0,0.450530678524519,1.6072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68152568894461,0,0.393419540227666,0,0.822405995998037,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.58902087180316,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0,0,0.220587945464788,0.217879444092406,0,0.134831308160164,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0.514703430895577,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0.761016608938393,0,0,0.246217006087397,1.63802985597466,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.428933980974443,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,1.14861935834114,0,0,0,0,0,2.1673383622212,0,1.92514554419623,0.76228387266739,0,0.773288812777695,0,0,18.7251755986796,5.9832291840805,3.72973962092432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.10152039184331,1.07857100409308,4.37582986994122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0.15403067420883,0,0,0.949964660035881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.658589785919804,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0.677167111206413,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0.445773537109913,0,0,0,0,0,0.140669416410513,0,0,0,0,0.276283915531148,0.503865495708552,0.20453736500431,0.369254416383208,0,0.718946809178615,0.716084698702437,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0.508507300585533,0.472775363535873,0.344743373241465,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0.113942055847001,0,0,0.977826347298073,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,1.26598838716816,1.14262965711403,0,0,0.995261931078505,0.265372693510018,0,0.296521128680622,0.494255755786011,0.835375596043643,0.269604531922708,0,0,0,0,0,1.18375320854817,0,0,0.189559738885464,0,0,0,0,0.627865836814451,0,0.853828638089378,0,0,0.979923974143776,0,0,0,0,0.0730893170861856,0,0.0969890164884194,0,0.451961481561065,0,0.397429223405979,0,0.782205530939212,1.84365286578528,0.213452994739353,0,0,0,0,0,0.124252535565433,0.235694034616795,0,0,0,0,0,0.136905378891993,0,0,0,0,0.229160424011684,0,0.199679000498991,0,0,0,0.360299883542404,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,3.82455615637551,0,0,0,0,0,0.211200673038813,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533937062838473,2.04365596629566,0.414239055347196,0,0.197611631897944,0,0.638341257770182,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,6.29724357029046,0,0,0,0,0,0,0,0,0.107410557042488,0,1.19428766609585,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0.303859956177382,0.138258436151731,0.194860308839388,0,0.327130788511688,0,0,0,0.59996218756479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0.0642292250964595,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0.40341013740704,0.781514011233092,0,0.655087670040387,3.252833896775,0,0,0.413373593002368,0,0,0,0,0,3.19406069098988,0,0.336283722218824,0,0,0,0.115233987555779,0,0,0,0.354581522651905,0.222462803784138,0,0.157115589916002,0,0.913158720509496,0.215927591218621,18.1545641397079,0,0,0,0,0,0,0,0.691259661814092,0,0.118332000730565,0,0,1.14553434272025,0,0,0.335566295393377,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0.892769693028288,0,0,0.730336388246517,0,0,0,0,0.436350690340377,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,2.94760543171796,0,0.20686599172379,0.213233981900981,0,0,0.0620747142958579,0,0,0,0.435433495793923,0.342233301085281,0.202056159043763,0.573777643141411,0,1.54666210360852,0.106727345877715,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p@chr15:45753525..45753567,+ | |short_description=p@chr15:45753525..45753567,+ | ||
}} | }} |
Latest revision as of 02:02, 25 July 2015
Short description: | p@chr15:45753525..45753567, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:45753525..45753567, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.04e-51 | 76 |
bone element | 5.45e-47 | 82 |
hematopoietic system | 7.94e-45 | 98 |
blood island | 7.94e-45 | 98 |
skeletal element | 5.38e-42 | 90 |
immune system | 2.42e-40 | 93 |
hemolymphoid system | 9.17e-40 | 108 |
skeletal system | 7.20e-37 | 100 |
musculoskeletal system | 2.46e-18 | 167 |
lateral plate mesoderm | 1.41e-17 | 203 |
connective tissue | 2.68e-12 | 371 |
mesoderm | 4.43e-12 | 315 |
mesoderm-derived structure | 4.43e-12 | 315 |
presumptive mesoderm | 4.43e-12 | 315 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 8.98e-07 | 2 |