FFCP PHASE1:Hg19::chr15:55806824..55806840,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:55806824..55806840,- | |||
|coexpression_cluster_id=C113 | |coexpression_cluster_id=C113 | ||
|description=CAGE_peak_at_chr15:55806824..55806840,- | |description=CAGE_peak_at_chr15:55806824..55806840,- | ||
|id=chr15:55806824..55806840,- | |id=chr15:55806824..55806840,- | ||
|ontology_enrichment_celltype=CL:1001319!5.40e-08!1;CL:1000600!5.40e-08!1;CL:0000313!1.14e-07!1 | |ontology_enrichment_celltype=CL:1001319!5.40e-08!1;CL:1000600!5.40e-08!1;CL:0000313!1.14e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000039;5.15e-09;7!CL:0000586;5.15e-09;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,4.95e-09,7;CL:0000586,4.95e-09,7 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.92e-15;1!UBERON:0007123;1.42e-12;5!UBERON:0008947;3.16e-12;29!UBERON:0001041;8.08e-12;30 | |||
|ontology_enrichment_disease=DOID:1799!3.11e-08!1;DOID:10165!3.11e-08!1;DOID:1798!3.11e-08!1;DOID:2152!1.14e-07!1;DOID:1324!2.07e-07!15;DOID:0050615!5.96e-07!16 | |ontology_enrichment_disease=DOID:1799!3.11e-08!1;DOID:10165!3.11e-08!1;DOID:1798!3.11e-08!1;DOID:2152!1.14e-07!1;DOID:1324!2.07e-07!15;DOID:0050615!5.96e-07!16 | ||
|ontology_enrichment_disease_v019=DOID:1799;1.92e-15;1!DOID:10165;1.92e-15;1!DOID:1798;1.92e-15;1!DOID:3910;1.39e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,2.06e-15,1;DOID:10165,2.06e-15,1;DOID:1798,2.06e-15,1;DOID:3910,1.39e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0002048!2.44e-14!22;UBERON:0000117!2.44e-14!22;UBERON:0000171!2.44e-14!22;UBERON:0000170!2.44e-14!22;UBERON:0005597!2.44e-14!22;UBERON:0000118!2.44e-14!22;UBERON:0005178!1.32e-11!34;UBERON:0002224!1.32e-11!34;UBERON:0005181!3.06e-11!35;UBERON:0008947!2.91e-10!38;UBERON:0003258!2.91e-10!38;UBERON:0000464!7.28e-10!104;UBERON:0005911!1.16e-09!82;UBERON:0005177!1.62e-09!107;UBERON:0002171!2.52e-08!1;UBERON:0006518!2.52e-08!1;UBERON:0008949!2.52e-08!1;UBERON:0000101!2.52e-08!1;UBERON:0002167!2.52e-08!1;UBERON:0005153!3.51e-08!37;UBERON:0004645!5.40e-08!1;UBERON:0001256!5.40e-08!1;UBERON:0001259!5.40e-08!1;UBERON:0000998!6.19e-08!1;UBERON:0006868!6.19e-08!1;UBERON:0000466!1.11e-07!126;UBERON:0004911!1.14e-07!1;UBERON:0000915!3.41e-07!52;UBERON:0000065!4.89e-07!53 | |ontology_enrichment_uberon=UBERON:0002048!2.44e-14!22;UBERON:0000117!2.44e-14!22;UBERON:0000171!2.44e-14!22;UBERON:0000170!2.44e-14!22;UBERON:0005597!2.44e-14!22;UBERON:0000118!2.44e-14!22;UBERON:0005178!1.32e-11!34;UBERON:0002224!1.32e-11!34;UBERON:0005181!3.06e-11!35;UBERON:0008947!2.91e-10!38;UBERON:0003258!2.91e-10!38;UBERON:0000464!7.28e-10!104;UBERON:0005911!1.16e-09!82;UBERON:0005177!1.62e-09!107;UBERON:0002171!2.52e-08!1;UBERON:0006518!2.52e-08!1;UBERON:0008949!2.52e-08!1;UBERON:0000101!2.52e-08!1;UBERON:0002167!2.52e-08!1;UBERON:0005153!3.51e-08!37;UBERON:0004645!5.40e-08!1;UBERON:0001256!5.40e-08!1;UBERON:0001259!5.40e-08!1;UBERON:0000998!6.19e-08!1;UBERON:0006868!6.19e-08!1;UBERON:0000466!1.11e-07!126;UBERON:0004911!1.14e-07!1;UBERON:0000915!3.41e-07!52;UBERON:0000065!4.89e-07!53 | ||
|ontology_enrichment_uberon_v019=UBERON:0002048;4.17e-16;22!UBERON:0000117;4.17e-16;22!UBERON:0000171;4.17e-16;22!UBERON:0000170;4.17e-16;22!UBERON:0002171;1.92e-15;1!UBERON:0006518;1.92e-15;1!UBERON:0008949;1.92e-15;1!UBERON:0000101;1.92e-15;1!UBERON:0002167;1.92e-15;1!UBERON:0002046;1.42e-12;5!UBERON:0005178;4.03e-09;34!UBERON:0002224;4.03e-09;34!UBERON:0004903;1.39e-08;2!UBERON:0002173;1.39e-08;2!UBERON:0002186;1.39e-08;2!UBERON:0000341;2.23e-08;2!UBERON:0005181;1.65e-07;35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,4.59e-16,22;UBERON:0000117,4.59e-16,22;UBERON:0000171,4.59e-16,22;UBERON:0000170,4.59e-16,22;UBERON:0005597,4.59e-16,22;UBERON:0000118,4.59e-16,22;UBERON:0002171,1.34e-15,1;UBERON:0006518,1.34e-15,1;UBERON:0008949,1.34e-15,1;UBERON:0000101,1.34e-15,1;UBERON:0002167,1.34e-15,1;UBERON:0002046,1.42e-12,5;UBERON:0004117,1.42e-12,5;UBERON:0007689,1.42e-12,5;UBERON:0007123,1.42e-12,5;UBERON:0003091,1.42e-12,5;UBERON:0005178,2.12e-10,34;UBERON:0002224,2.12e-10,34;UBERON:0005181,4.20e-10,35;UBERON:0005153,1.48e-09,37;UBERON:0008947,2.65e-09,38;UBERON:0003258,2.65e-09,38;UBERON:0004903,1.39e-08,2;UBERON:0002173,1.39e-08,2;UBERON:0002186,1.39e-08,2;UBERON:0000341,1.73e-08,2;UBERON:0005911,5.31e-08,82;UBERON:0005157,1.64e-07,47;UBERON:0000915,8.82e-07,52 | |||
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|short_description=p@chr15:55806824..55806840,- | |short_description=p@chr15:55806824..55806840,- | ||
}} | }} |
Latest revision as of 02:40, 25 July 2015
Short description: | p@chr15:55806824..55806840, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:55806824..55806840, - |
Coexpression cluster: | C113_thyroid_throat_lung_lymph_small_colon_trachea |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 4.95e-09 | 7 |
germ cell | 4.95e-09 | 7 |
Ontology term | p-value | n |
---|---|---|
lung | 4.59e-16 | 22 |
respiratory tube | 4.59e-16 | 22 |
respiration organ | 4.59e-16 | 22 |
pair of lungs | 4.59e-16 | 22 |
lung primordium | 4.59e-16 | 22 |
lung bud | 4.59e-16 | 22 |
lower lobe of right lung | 1.34e-15 | 1 |
right lung lobe | 1.34e-15 | 1 |
lower lobe of lung | 1.34e-15 | 1 |
lobe of lung | 1.34e-15 | 1 |
right lung | 1.34e-15 | 1 |
thyroid gland | 1.42e-12 | 5 |
pharyngeal pouch | 1.42e-12 | 5 |
thyroid diverticulum | 1.42e-12 | 5 |
pharyngeal pouch 2 | 1.42e-12 | 5 |
thyroid primordium | 1.42e-12 | 5 |
thoracic cavity element | 2.12e-10 | 34 |
thoracic cavity | 2.12e-10 | 34 |
thoracic segment organ | 4.20e-10 | 35 |
epithelial bud | 1.48e-09 | 37 |
respiratory primordium | 2.65e-09 | 38 |
endoderm of foregut | 2.65e-09 | 38 |
bronchoalveolar duct junction | 1.39e-08 | 2 |
alveolar duct | 1.39e-08 | 2 |
bronchiole | 1.39e-08 | 2 |
throat | 1.73e-08 | 2 |
endo-epithelium | 5.31e-08 | 82 |
epithelial fold | 1.64e-07 | 47 |
thoracic segment of trunk | 8.82e-07 | 52 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 2.06e-15 | 1 |
endocrine pancreas cancer | 2.06e-15 | 1 |
pancreatic endocrine carcinoma | 2.06e-15 | 1 |
lung adenocarcinoma | 1.39e-08 | 2 |