FFCP PHASE1:Hg19::chr15:89181946..89181963,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr15:89181946..89181963,-
|short_description=p@chr15:89181946..89181963,-
|description=CAGE_peak_at_chr15:89181946..89181963,-
|association_with_transcript=NA
...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr15:89181946..89181963,- | |||
|coexpression_cluster_id=C2067 | |||
|description=CAGE_peak_at_chr15:89181946..89181963,- | |||
|id=chr15:89181946..89181963,- | |||
|ontology_enrichment_celltype=CL:0000738!2.83e-44!140;CL:0002087!1.61e-37!119;CL:0002031!5.03e-37!124;CL:0000037!2.46e-34!172;CL:0000566!2.46e-34!172;CL:0000988!1.62e-33!182;CL:0002032!2.38e-30!165;CL:0000837!2.38e-30!165;CL:0000838!6.17e-25!52;CL:0000542!3.40e-24!53;CL:0000051!3.40e-24!53;CL:0002057!1.37e-21!42;CL:0000860!2.25e-19!45;CL:0000766!1.15e-17!76;CL:0000791!6.10e-16!18;CL:0000789!6.10e-16!18;CL:0002420!6.10e-16!18;CL:0002419!6.10e-16!18;CL:0000790!6.10e-16!18;CL:0000839!3.50e-13!70;CL:0000557!7.47e-13!71;CL:0002009!2.02e-12!65;CL:0000236!2.27e-12!14;CL:0000084!2.65e-12!25;CL:0000827!2.65e-12!25;CL:0002194!3.88e-12!63;CL:0000576!3.88e-12!63;CL:0000040!3.88e-12!63;CL:0000559!3.88e-12!63;CL:0000134!8.37e-12!358;CL:0002320!5.29e-11!365;CL:0000945!5.67e-11!24;CL:0000826!5.67e-11!24;CL:0000625!2.49e-10!11;CL:0000763!3.68e-10!112;CL:0000049!3.68e-10!112;CL:0000219!6.27e-09!390;CL:0000624!1.17e-08!6;CL:0000094!1.34e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000791;3.64e-32;18!CL:0000789;3.64e-32;18!CL:0002419;3.64e-32;18!CL:0000236;1.45e-29;13!CL:0000542;3.06e-25;53!CL:0000084;3.51e-22;25!CL:0000624;4.81e-20;6!CL:0000625;4.56e-17;11!CL:0000945;7.68e-15;24!CL:0002087;8.33e-13;104!CL:0000898;4.61e-11;3!CL:0000860;3.91e-10;33!CL:0002057;3.91e-10;33!CL:0000623;4.54e-10;3!CL:0000094;5.47e-10;8!CL:0000738;7.78e-09;136!CL:0000815;5.49e-08;2!CL:0000792;5.49e-08;2!CL:0002677;5.49e-08;2!CL:0000771;1.24e-07;2!CL:0000081;3.64e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,5.32e-43,136;CL:0000838,2.95e-42,52;CL:0000542,2.58e-41,53;CL:0000051,2.58e-41,53;CL:0002087,9.85e-39,115;CL:0002031,1.04e-34,120;CL:0000037,1.18e-32,168;CL:0000791,4.20e-32,18;CL:0000789,4.20e-32,18;CL:0002420,4.20e-32,18;CL:0002419,4.20e-32,18;CL:0000790,4.20e-32,18;CL:0002032,3.38e-31,161;CL:0000837,3.38e-31,161;CL:0000988,2.04e-30,177;CL:0000236,4.45e-27,14;CL:0000084,3.88e-22,25;CL:0000827,3.88e-22,25;CL:0000624,4.76e-20,6;CL:0000625,5.24e-17,11;CL:0000945,9.79e-15,24;CL:0000826,9.79e-15,24;CL:0000898,3.85e-11,3;CL:0000623,3.89e-10,3;CL:0000825,3.89e-10,3;CL:0000094,5.81e-10,8;CL:0000860,1.38e-09,42;CL:0002057,1.38e-09,42;CL:0000134,1.38e-09,354;CL:0000766,1.74e-09,72;CL:0002320,3.44e-09,361;CL:0000473,4.81e-08,48;CL:0000234,4.81e-08,48;CL:0000815,4.88e-08,2;CL:0000792,4.88e-08,2;CL:0002677,4.88e-08,2;CL:0000219,8.47e-08,386;CL:0000771,9.87e-08,2;CL:0000081,3.80e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;3.64e-32;18!CL:0000051;3.06e-25;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.25e-18!102;UBERON:0003061!2.25e-18!102;UBERON:0002193!1.16e-16!112;UBERON:0002371!1.59e-12!80;UBERON:0001474!2.00e-11!86;UBERON:0002384!6.27e-10!375;UBERON:0002405!8.76e-10!115;UBERON:0004765!3.99e-09!101;UBERON:0001434!3.99e-09!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;3.60e-07;2!UBERON:0005058;3.60e-07;2!UBERON:0009113;3.60e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.19e-08,371;UBERON:0002370,5.99e-08,4;UBERON:0005058,5.99e-08,4;UBERON:0009113,5.99e-08,4;UBERON:0003295,5.99e-08,4;UBERON:0005562,5.99e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.93364276848904,0.767658796194425,1.08371286321253,0,0,0,0.46480320348181,0.142169232487422,0.587200878669695,3.32397245119126,0.401088894940283,0.651032612147555,0,0.32389366601898,0,0.290796477559129,0,0.242584061187816,0.232429036905685,1.6446715520873,0.309706370895104,1.43846196161075,0.768482119587302,0.47296445977717,0.689491361473237,0.645484683583826,0,0.188242339542605,1.36453075028923,0,1.83650335422542,2.56743221660875,1.91801137739712,0.659702600373432,0.598390972864896,0,3.19230162491442,1.13477044938228,0.622822248995575,2.76373531782418,0.521482918420201,2.17188844705117,1.21079900526674,1.84138817993782,0.632924774881769,0,0,0,0.44931452458598,0,0.32145117339416,0.285012743741249,0.59675003159727,0,7.03984977845291,6.00752472388345,4.44754626931777,2.56038133539904,8.80871171479227,4.59801951963587,6.61044872784862,7.63243003628291,2.27685187643779,1.17447437874188,1.14681968437569,0,0.560508562981536,1.05353633910031,3.34406609193516,3.14408610199332,2.46721798799411,1.00311897234407,3.91106719960308,6.62826928028627,5.84480185223734,0.891283655081389,5.00830042707223,4.65221178625604,4.60366568400527,0.25618263945135,0.780356085359269,0.164437904603676,0.552700035571697,0,2.81744470007915,1.87278579662799,3.1360657141493,0,3.83220493601921,4.81078423675682,2.27717722817553,3.50421955756506,3.25541726928209,0,1.05402583354441,1.4078527226986,2.49861453104692,0.473554504088034,1.64225599384209,1.81446068902259,2.13952156626806,0.579297615531196,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0,0,0,0,0,0,0.238490624305342,1.71598473234038,0.371457501329565,0,0,0,0.56530794192401,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0.949265659568129,0,2.63560834872127,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0,0,0.122834317311768,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0.113432183160021,0,0,0.211931901159562,0,0,0.515281080091258,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.432359860250884,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77327684181734,2.58753089831421,2.18183161675572,0,0,0,0,0,0.749007023947182,0,2.07207756718018,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0.620304078368662,1.72571360654893,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0.501689773854853,0,0,0,0.657779629937804,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0.143411352204052,0,0,0,0.211107635297664,0,0,0.349934720244983,0,0,0,0,0,0,0,0,1.01489521846434,0.764637207142375,0,0.476463550915578,0,1.29694662238543,0.540031437238115,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0.102268682502155,0.123084805461069,0,0.0898683511473268,0,0,0.690503839458535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0.123563938946503,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0.300646838828985,0,0,0,0,0,0.284609546029793,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0.262887354279314,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0.160753148465019,0,0,0,0.77380195455795,0,0,0,0.0524545881349981,0.105600336519406,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,1.32506888912221,0,0,0,0,0.747511887973863,0,0,0,0.197611631897944,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0.159296767163702,0,0.310525913752519,0.414706207840855,0,0,0.150257608997218,0,0,0.181848659202559,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0.516644938982447,0,0.184105950251841,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0.70975570501128,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0.606965604236632,0,0.0887023701626388,0.460935950223117,0,0,0,0.236387681767936,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0.109940516745429,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.281951753939561,0.128915775947154,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0.0757786982182394,0,0,0,0,0,1.80848947540817,2.85543685760946,0.112131862580613,0.0636471582781649,0.202117188958219,0,0,0.0673520530145875,0.143444410785353,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.93364276848904,0.767658796194425,1.08371286321253,0,0,0,0.46480320348181,0.142169232487422,0.587200878669695,3.32397245119126,0.401088894940283,0.651032612147555,0,0.32389366601898,0,0.290796477559129,0,0.242584061187816,0.232429036905685,1.6446715520873,0.309706370895104,1.43846196161075,0.768482119587302,0.47296445977717,0.689491361473237,0.645484683583826,0,0.188242339542605,1.36453075028923,0,1.83650335422542,2.56743221660875,1.91801137739712,0.659702600373432,0.598390972864896,0,3.19230162491442,1.13477044938228,0.622822248995575,2.76373531782418,0.521482918420201,2.17188844705117,1.21079900526674,1.84138817993782,0.632924774881769,0,0,0,0.44931452458598,0,0.32145117339416,0.285012743741249,0.59675003159727,0,7.03984977845291,6.00752472388345,4.44754626931777,2.56038133539904,8.80871171479227,4.59801951963587,6.61044872784862,7.63243003628291,2.27685187643779,1.17447437874188,1.14681968437569,0,0.560508562981536,1.05353633910031,3.34406609193516,3.14408610199332,2.46721798799411,1.00311897234407,3.91106719960308,6.62826928028627,5.84480185223734,0.891283655081389,5.00830042707223,4.65221178625604,4.60366568400527,0.25618263945135,0.780356085359269,0.164437904603676,0.552700035571697,0,2.81744470007915,1.87278579662799,3.1360657141493,0,3.83220493601921,4.81078423675682,2.27717722817553,3.50421955756506,3.25541726928209,0,1.05402583354441,1.4078527226986,2.49861453104692,0.473554504088034,1.64225599384209,1.81446068902259,2.13952156626806,0.579297615531196,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0,0,0,0,0,0,0.238490624305342,1.71598473234038,0.371457501329565,0,0,0,0.56530794192401,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0.949265659568129,0,2.63560834872127,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0,0,0.122834317311768,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0.113432183160021,0,0,0.211931901159562,0,0,0.515281080091258,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.432359860250884,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77327684181734,2.58753089831421,2.18183161675572,0,0,0,0,0,0.749007023947182,0,2.07207756718018,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0.620304078368662,1.72571360654893,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0.501689773854853,0,0,0,0.657779629937804,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0.143411352204052,0,0,0,0.211107635297664,0,0,0.349934720244983,0,0,0,0,0,0,0,0,1.01489521846434,0.764637207142375,0,0.476463550915578,0,1.29694662238543,0.540031437238115,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0.102268682502155,0.123084805461069,0,0.0898683511473268,0,0,0.690503839458535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0.123563938946503,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0.300646838828985,0,0,0,0,0,0.284609546029793,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0.262887354279314,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0.160753148465019,0,0,0,0.77380195455795,0,0,0,0.0524545881349981,0.105600336519406,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,1.32506888912221,0,0,0,0,0.747511887973863,0,0,0,0.197611631897944,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0.159296767163702,0,0.310525913752519,0.414706207840855,0,0,0.150257608997218,0,0,0.181848659202559,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0.516644938982447,0,0.184105950251841,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0.70975570501128,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0.606965604236632,0,0.0887023701626388,0.460935950223117,0,0,0,0.236387681767936,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0.109940516745429,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.281951753939561,0.128915775947154,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0.0757786982182394,0,0,0,0,0,1.80848947540817,2.85543685760946,0.112131862580613,0.0636471582781649,0.202117188958219,0,0,0.0673520530145875,0.143444410785353,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr15:89181946..89181963,- | |||
}} | }} |
Latest revision as of 05:14, 25 July 2015
Short description: | p@chr15:89181946..89181963, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:89181946..89181963, - |
Coexpression cluster: | C2067_CD4_CD19_CD8_B_thymus_plasma_b |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.19e-08 | 371 |
thymus | 5.99e-08 | 4 |
hemolymphoid system gland | 5.99e-08 | 4 |
thymic region | 5.99e-08 | 4 |
pharyngeal gland | 5.99e-08 | 4 |
thymus primordium | 5.99e-08 | 4 |