FFCP PHASE1:Hg19::chr15:99091696..99091708,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:99091696..99091708,+ | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_at_chr15:99091696..99091708,+ | |description=CAGE_peak_at_chr15:99091696..99091708,+ | ||
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|ontology_enrichment_celltype=CL:0002057!2.96e-85!42;CL:0000860!5.11e-79!45;CL:0000766!5.44e-62!76;CL:0000839!2.51e-53!70;CL:0002194!4.27e-53!63;CL:0000576!4.27e-53!63;CL:0000040!4.27e-53!63;CL:0000559!4.27e-53!63;CL:0000557!1.82e-52!71;CL:0002009!3.10e-51!65;CL:0000763!2.94e-39!112;CL:0000049!2.94e-39!112;CL:0000738!2.90e-35!140;CL:0002087!5.39e-30!119;CL:0000037!6.25e-27!172;CL:0000566!6.25e-27!172;CL:0002031!1.43e-26!124;CL:0000988!6.33e-25!182;CL:0002032!9.46e-24!165;CL:0000837!9.46e-24!165;CL:0000842!5.29e-11!3;CL:0000134!2.12e-09!358;CL:0002320!4.93e-09!365;CL:0000224!2.29e-08!4;CL:0000219!9.48e-08!390;CL:0000094!1.12e-07!8;CL:0000048!8.77e-07!430 | |ontology_enrichment_celltype=CL:0002057!2.96e-85!42;CL:0000860!5.11e-79!45;CL:0000766!5.44e-62!76;CL:0000839!2.51e-53!70;CL:0002194!4.27e-53!63;CL:0000576!4.27e-53!63;CL:0000040!4.27e-53!63;CL:0000559!4.27e-53!63;CL:0000557!1.82e-52!71;CL:0002009!3.10e-51!65;CL:0000763!2.94e-39!112;CL:0000049!2.94e-39!112;CL:0000738!2.90e-35!140;CL:0002087!5.39e-30!119;CL:0000037!6.25e-27!172;CL:0000566!6.25e-27!172;CL:0002031!1.43e-26!124;CL:0000988!6.33e-25!182;CL:0002032!9.46e-24!165;CL:0000837!9.46e-24!165;CL:0000842!5.29e-11!3;CL:0000134!2.12e-09!358;CL:0002320!4.93e-09!365;CL:0000224!2.29e-08!4;CL:0000219!9.48e-08!390;CL:0000094!1.12e-07!8;CL:0000048!8.77e-07!430 | ||
|ontology_enrichment_celltype_v019=CL:0000860;8.29e-98;33!CL:0002057;8.29e-98;33!CL:0000473;2.63e-64;39!CL:0000234;2.63e-64;39!CL:0000576;1.92e-49;48!CL:0000766;7.84e-34;69!CL:0000763;3.58e-13;100!CL:0002087;8.99e-12;104!CL:0000094;1.01e-08;8!CL:0000738;7.79e-08;136 | |ontology_enrichment_celltype_v019=CL:0000860;8.29e-98;33!CL:0002057;8.29e-98;33!CL:0000473;2.63e-64;39!CL:0000234;2.63e-64;39!CL:0000576;1.92e-49;48!CL:0000766;7.84e-34;69!CL:0000763;3.58e-13;100!CL:0002087;8.99e-12;104!CL:0000094;1.01e-08;8!CL:0000738;7.79e-08;136 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.77e-90,42;CL:0002057,8.77e-90,42;CL:0000473,4.27e-78,48;CL:0000234,4.27e-78,48;CL:0000766,1.34e-64,72;CL:0002194,1.00e-61,59;CL:0000576,1.00e-61,59;CL:0000040,1.00e-61,59;CL:0000559,1.00e-61,59;CL:0002009,1.30e-59,61;CL:0000839,7.02e-55,66;CL:0000557,5.12e-54,67;CL:0000763,5.92e-42,108;CL:0000049,5.92e-42,108;CL:0000738,1.50e-32,136;CL:0002087,4.66e-30,115;CL:0002031,1.18e-28,120;CL:0002032,6.79e-27,161;CL:0000837,6.79e-27,161;CL:0000037,1.31e-25,168;CL:0000988,4.19e-24,177;CL:0000134,6.19e-10,354;CL:0002320,1.18e-09,361;CL:0000094,1.06e-08,8;CL:0000219,1.13e-08,386;CL:0000048,1.81e-07,427;CL:0000723,2.65e-07,433;CL:0000034,4.35e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;9.99e-61;42!CL:0000049;5.07e-13;108 | |ontology_enrichment_development_v019=CL:0002057;9.99e-61;42!CL:0000049;5.07e-13;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.89e-46!102;UBERON:0003061!4.89e-46!102;UBERON:0002371!1.13e-45!80;UBERON:0001474!6.28e-42!86;UBERON:0002193!4.01e-41!112;UBERON:0004765!1.71e-34!101;UBERON:0001434!1.71e-34!101;UBERON:0002405!3.18e-31!115;UBERON:0003081!1.48e-20!216;UBERON:0002204!6.96e-19!167;UBERON:0002384!1.55e-08!375 | |ontology_enrichment_uberon=UBERON:0002390!4.89e-46!102;UBERON:0003061!4.89e-46!102;UBERON:0002371!1.13e-45!80;UBERON:0001474!6.28e-42!86;UBERON:0002193!4.01e-41!112;UBERON:0004765!1.71e-34!101;UBERON:0001434!1.71e-34!101;UBERON:0002405!3.18e-31!115;UBERON:0003081!1.48e-20!216;UBERON:0002204!6.96e-19!167;UBERON:0002384!1.55e-08!375 | ||
|ontology_enrichment_uberon_v019=UBERON:0002134;1.71e-08;1!UBERON:0005208;1.71e-08;1!UBERON:0004145;1.71e-08;1!UBERON:0005946;1.71e-08;1!UBERON:0005965;1.71e-08;1!UBERON:0002078;1.71e-08;1 | |ontology_enrichment_uberon_v019=UBERON:0002134;1.71e-08;1!UBERON:0005208;1.71e-08;1!UBERON:0004145;1.71e-08;1!UBERON:0005946;1.71e-08;1!UBERON:0005965;1.71e-08;1!UBERON:0002078;1.71e-08;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.95e-47,76;UBERON:0001474,1.46e-43,82;UBERON:0004765,2.16e-39,90;UBERON:0002405,5.20e-38,93;UBERON:0002390,6.80e-36,98;UBERON:0003061,6.80e-36,98;UBERON:0001434,4.18e-35,100;UBERON:0002193,3.05e-32,108;UBERON:0002204,1.62e-19,167;UBERON:0003081,5.63e-17,203;UBERON:0000926,1.87e-09,315;UBERON:0004120,1.87e-09,315;UBERON:0006603,1.87e-09,315;UBERON:0002384,2.82e-09,371;UBERON:0002134,1.53e-08,1;UBERON:0005208,1.53e-08,1;UBERON:0005946,1.53e-08,1;UBERON:0005965,1.53e-08,1;UBERON:0002078,1.53e-08,1 | |||
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|short_description=p@chr15:99091696..99091708,+ | |short_description=p@chr15:99091696..99091708,+ | ||
}} | }} |
Latest revision as of 05:57, 25 July 2015
Short description: | p@chr15:99091696..99091708, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:99091696..99091708, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 8.77e-90 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.77e-90 | 42 |
defensive cell | 4.27e-78 | 48 |
phagocyte | 4.27e-78 | 48 |
myeloid leukocyte | 1.34e-64 | 72 |
monopoietic cell | 1.00e-61 | 59 |
monocyte | 1.00e-61 | 59 |
monoblast | 1.00e-61 | 59 |
promonocyte | 1.00e-61 | 59 |
macrophage dendritic cell progenitor | 1.30e-59 | 61 |
myeloid lineage restricted progenitor cell | 7.02e-55 | 66 |
granulocyte monocyte progenitor cell | 5.12e-54 | 67 |
myeloid cell | 5.92e-42 | 108 |
common myeloid progenitor | 5.92e-42 | 108 |
leukocyte | 1.50e-32 | 136 |
nongranular leukocyte | 4.66e-30 | 115 |
hematopoietic lineage restricted progenitor cell | 1.18e-28 | 120 |
hematopoietic oligopotent progenitor cell | 6.79e-27 | 161 |
hematopoietic multipotent progenitor cell | 6.79e-27 | 161 |
hematopoietic stem cell | 1.31e-25 | 168 |
hematopoietic cell | 4.19e-24 | 177 |
mesenchymal cell | 6.19e-10 | 354 |
connective tissue cell | 1.18e-09 | 361 |
granulocyte | 1.06e-08 | 8 |
motile cell | 1.13e-08 | 386 |
multi fate stem cell | 1.81e-07 | 427 |
somatic stem cell | 2.65e-07 | 433 |
stem cell | 4.35e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.95e-47 | 76 |
bone element | 1.46e-43 | 82 |
skeletal element | 2.16e-39 | 90 |
immune system | 5.20e-38 | 93 |
hematopoietic system | 6.80e-36 | 98 |
blood island | 6.80e-36 | 98 |
skeletal system | 4.18e-35 | 100 |
hemolymphoid system | 3.05e-32 | 108 |
musculoskeletal system | 1.62e-19 | 167 |
lateral plate mesoderm | 5.63e-17 | 203 |
mesoderm | 1.87e-09 | 315 |
mesoderm-derived structure | 1.87e-09 | 315 |
presumptive mesoderm | 1.87e-09 | 315 |
connective tissue | 2.82e-09 | 371 |
tricuspid valve | 1.53e-08 | 1 |
right atrium valve | 1.53e-08 | 1 |
outflow tract of atrium | 1.53e-08 | 1 |
outflow part of right atrium | 1.53e-08 | 1 |
right cardiac atrium | 1.53e-08 | 1 |