FFCP PHASE1:Hg19::chr16:12300691..12300694,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:12300691..12300694,+ | |||
|description=CAGE_peak_at_chr16:12300691..12300694,+ | |description=CAGE_peak_at_chr16:12300691..12300694,+ | ||
|id=chr16:12300691..12300694,+ | |id=chr16:12300691..12300694,+ | ||
|ontology_enrichment_celltype=CL:0000738!1.30e-15!140;CL:0002031!4.94e-15!124;CL:0002087!9.26e-15!119;CL:0000037!2.13e-10!172;CL:0000566!2.13e-10!172;CL:0000945!4.51e-10!24;CL:0000826!4.51e-10!24;CL:0002032!1.02e-09!165;CL:0000837!1.02e-09!165;CL:0000988!3.77e-09!182;CL:0000557!3.99e-08!71;CL:0002009!4.65e-08!65;CL:0000838!4.89e-08!52;CL:0000542!1.11e-07!53;CL:0000051!1.11e-07!53;CL:0002194!2.26e-07!63;CL:0000576!2.26e-07!63;CL:0000040!2.26e-07!63;CL:0000559!2.26e-07!63;CL:0000839!3.56e-07!70;CL:0000236!4.04e-07!14 | |ontology_enrichment_celltype=CL:0000738!1.30e-15!140;CL:0002031!4.94e-15!124;CL:0002087!9.26e-15!119;CL:0000037!2.13e-10!172;CL:0000566!2.13e-10!172;CL:0000945!4.51e-10!24;CL:0000826!4.51e-10!24;CL:0002032!1.02e-09!165;CL:0000837!1.02e-09!165;CL:0000988!3.77e-09!182;CL:0000557!3.99e-08!71;CL:0002009!4.65e-08!65;CL:0000838!4.89e-08!52;CL:0000542!1.11e-07!53;CL:0000051!1.11e-07!53;CL:0002194!2.26e-07!63;CL:0000576!2.26e-07!63;CL:0000040!2.26e-07!63;CL:0000559!2.26e-07!63;CL:0000839!3.56e-07!70;CL:0000236!4.04e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000236;4.76e-37;13!CL:0000945;1.31e-19;24!CL:0000542;1.48e-09;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,6.64e-35,14;CL:0000945,6.19e-20,24;CL:0000826,6.19e-20,24;CL:0000838,6.76e-11,52;CL:0000542,1.15e-10,53;CL:0000051,1.15e-10,53;CL:0002087,6.73e-09,115;CL:0002031,1.96e-08,120;CL:0000738,3.51e-07,136 | |||
|ontology_enrichment_development_v019=CL:0000051;1.48e-09;53!UBERON:0010227;5.09e-09;1!UBERON:0005425;5.09e-09;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.80e-13!115;UBERON:0002193!9.24e-09!112;UBERON:0002390!1.75e-08!102;UBERON:0003061!1.75e-08!102;UBERON:0002405!1.04e-07!115;UBERON:0001049!1.70e-07!57;UBERON:0005068!1.70e-07!57;UBERON:0006241!1.70e-07!57;UBERON:0007135!1.70e-07!57;UBERON:0002371!7.40e-07!80 | |ontology_enrichment_uberon=UBERON:0007023!3.80e-13!115;UBERON:0002193!9.24e-09!112;UBERON:0002390!1.75e-08!102;UBERON:0003061!1.75e-08!102;UBERON:0002405!1.04e-07!115;UBERON:0001049!1.70e-07!57;UBERON:0005068!1.70e-07!57;UBERON:0006241!1.70e-07!57;UBERON:0007135!1.70e-07!57;UBERON:0002371!7.40e-07!80 | ||
|ontology_enrichment_uberon_v019=UBERON:0005162;2.55e-16;2!UBERON:0000122;2.55e-16;2!UBERON:0002081;2.55e-16;2!UBERON:0004151;3.41e-11;3!UBERON:0002336;5.09e-09;1!UBERON:0002079;5.09e-09;1!UBERON:0002134;5.09e-09;1!UBERON:0000941;5.09e-09;1!UBERON:0001785;5.09e-09;1!UBERON:0002464;5.09e-09;1!UBERON:0004904;5.09e-09;1!UBERON:0011215;5.09e-09;1!UBERON:0001018;5.09e-09;1!UBERON:0001021;5.09e-09;1!UBERON:0005208;5.09e-09;1!UBERON:0002473;5.09e-09;1!UBERON:0005340;5.09e-09;1!UBERON:0003544;5.09e-09;1!UBERON:0005970;5.09e-09;1!UBERON:0002316;5.09e-09;1!UBERON:0001020;5.09e-09;1!UBERON:0004145;5.09e-09;1!UBERON:0005946;5.09e-09;1!UBERON:0005965;5.09e-09;1!UBERON:0002437;5.09e-09;1!UBERON:0002078;5.09e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002081,2.19e-16,2;UBERON:0010227,2.19e-16,2;UBERON:0005162,3.49e-16,2;UBERON:0000122,3.49e-16,2;UBERON:0004151,3.09e-11,3;UBERON:0002134,4.54e-09,1;UBERON:0005208,4.54e-09,1;UBERON:0005946,4.54e-09,1;UBERON:0005965,4.54e-09,1;UBERON:0002078,4.54e-09,1;UBERON:0002079,4.91e-09,1;UBERON:0000941,5.31e-09,1;UBERON:0001785,5.31e-09,1;UBERON:0002464,5.31e-09,1;UBERON:0004904,5.31e-09,1;UBERON:0001021,5.31e-09,1;UBERON:0003902,5.31e-09,1;UBERON:0005425,5.31e-09,1;UBERON:0002336,6.72e-09,1;UBERON:0011215,6.72e-09,1;UBERON:0001018,6.72e-09,1;UBERON:0002473,6.72e-09,1;UBERON:0005340,6.72e-09,1;UBERON:0003544,6.72e-09,1;UBERON:0005970,6.72e-09,1;UBERON:0002316,6.72e-09,1;UBERON:0001020,6.72e-09,1;UBERON:0002437,6.72e-09,1 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0.305653622991805,0.328402357799783,0.236132343941038,0,0,0.309632246632152,0,0,0.369754010166788,0.154934401160603,0.853015394924529,0,1.10799081706375,0.401088894940283,0.217010870715852,0.895661896959697,0.971680998056939,0.257575567634187,0.581592955118259,0,0.485168122375632,0.464858073811369,0,0.619412741790207,0,0.768482119587302,0.709446689665756,0.689491361473237,0,0,0.188242339542605,0.272906150057846,0,0,0.320929027076094,0,0.659702600373432,0.598390972864896,0.852449501065388,0,0,0,0,0.521482918420201,0.217188844705117,0,0,0,0.211255286311942,0.637812899895131,1.04829322754188,0.673971786878971,1.20141514273205,0.32145117339416,0,0.39783335439818,0.547992461293902,1.75996244461323,2.73069305631066,0.889509253863555,2.98711155796555,1.60158394814405,1.14950487990897,0,1.90810750907073,1.70763890732835,0,1.52909291250092,0,0,0.263384084775077,0.196709770113833,0,0.411202997999018,0,0.32592226663359,0,0,0.222820913770347,0.589211814949674,0.664601683750863,0.541607727530031,0.384273959177026,0.520237390239513,0.493313713811028,0.552700035571697,0.289803085735052,0.14828656316206,0.802622484269139,1.04535523804977,0.226618685395132,0.383220493601921,0.68725489096526,0,0,0,0,0,0,0,0,1.64225599384209,0.604820229674197,0,0.289648807765598,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,1.37528029272598,0,0,0.324547393654683,0.348259474598534,0.398873881556595,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0.149448680551801,0,0,0.140450806702248,0.204154171254893,0.245668634623536,0.206651562351531,0,0.247266929278557,0,0,0.336672227908132,0,0,0,0,0.300476117813194,0,0,0,0,0,0,0.257640540045629,0,0.168776332241266,0.0974370051611986,0.252433774244115,0,0.161646056818812,0,0,0.169560592310488,0,0,0.286804595389004,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,2.53510069643662,0,0,0.441463099414651,0,0.171567810298526,0,0,0.100528972411631,0,0,0,0,0.115930404975077,0,0.144366447761074,0,0.570762456703795,0.790204397959275,0,0.738651018262192,0,0.445893486866185,0,0,0,0,0,0,0,0.176096868026452,0,0.720599767084807,0.37872730027914,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0.710783897485092,0,0.301439377059586,0,0,0,1.00451418286425,0,0.239624855491583,0,0,0,0,0.179060963239896,0.112085143993527,0.197030760201927,0.431255149719035,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0.260650843404249,0,0,0.413536052245775,0.862856803274467,0,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0.160853921143607,0,0,0,0.0821271560138091,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0.107420244868274,0.290033387828457,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.282431402330337,0,0,0,0,0,0,1.70894156152249,0.476463550915578,0,0,0,0.79312517629427,0,0,0,0,0.432807638929335,0,0,0,0.383010740264733,0.211673582723883,0,0.280797178113459,0.228234679033192,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.111443384277478,0,0,0,0,0,0,0.222617410045812,0,0.844501632511974,0.996239941255349,0.276283915531148,0.251932747854276,0,0.492339221844278,0,0.0898683511473268,0.537063524026827,0,0.0986434056369336,0,0,0,0.278304294485554,0,0.260427761085233,0,0,0,0,0.236387681767936,0.344743373241465,0.291604613383254,0,0.885741385813839,0.241192877250816,0,0.110579259931225,0.295547618953547,0,0,0,0.461701551022782,0,0.23056390438806,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0.489698424477443,0,0,0,0.0884575645033392,0.611030144933625,0,0.123563938946503,0,1.28062152663286,0,0,0.364909578431332,0,0,0.394584402849391,0,0.61214552326098,0.695052375913368,0.300646838828985,0,0,0,0,0,0,0.138674673013139,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0.451961481561065,0,0.19871461170299,0.316553979779393,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0.104602846312333,0.101998217636322,0,0,0.136905378891993,0,0,0.262887354279314,0.279282401272254,0.687481272035051,1.43574604915363,0.599037001496973,0.429226048136571,0.223171457441873,0.0671834724867263,0,0,0.0787831823072236,0.0824158583811665,0,0.0984274815147488,0,0,0.136203406111576,0,0,0,0.2249738915515,0.77380195455795,0.425246896606173,0,0.788057072991982,1.31136470337495,0,0.35857467866569,0.191915197319445,1.42939065274673,0,0.25426853765475,0,0,0,0,0.082092520749339,0.170388021785422,0,0.146552233678082,0,0.129282956361551,0.52893040697076,0,0.704815022316672,0.106787412567695,0,0,0.496166021811951,0.592834895693833,0.730755590285376,0,0,0.5013797880454,0,0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|short_description=p@chr16:12300691..12300694,+ | |short_description=p@chr16:12300691..12300694,+ | ||
}} | }} |
Latest revision as of 06:18, 25 July 2015
Short description: | p@chr16:12300691..12300694, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:12300691..12300694, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 6.64e-35 | 14 |
lymphocyte of B lineage | 6.19e-20 | 24 |
pro-B cell | 6.19e-20 | 24 |
lymphoid lineage restricted progenitor cell | 6.76e-11 | 52 |
lymphocyte | 1.15e-10 | 53 |
common lymphoid progenitor | 1.15e-10 | 53 |
nongranular leukocyte | 6.73e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 1.96e-08 | 120 |
leukocyte | 3.51e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
cardiac atrium | 2.19e-16 | 2 |
future cardiac atrium | 2.19e-16 | 2 |
multi cell component structure | 3.49e-16 | 2 |
neuron projection bundle | 3.49e-16 | 2 |
cardiac chamber | 3.09e-11 | 3 |
tricuspid valve | 4.54e-09 | 1 |
right atrium valve | 4.54e-09 | 1 |
outflow tract of atrium | 4.54e-09 | 1 |
outflow part of right atrium | 4.54e-09 | 1 |
right cardiac atrium | 4.54e-09 | 1 |
left cardiac atrium | 4.91e-09 | 1 |
cranial nerve II | 5.31e-09 | 1 |
cranial nerve | 5.31e-09 | 1 |
nerve trunk | 5.31e-09 | 1 |
nerve connecting eye with brain | 5.31e-09 | 1 |
nerve | 5.31e-09 | 1 |
retinal neural layer | 5.31e-09 | 1 |
presumptive neural retina | 5.31e-09 | 1 |
corpus callosum | 6.72e-09 | 1 |
central nervous system cell part cluster | 6.72e-09 | 1 |
axon tract | 6.72e-09 | 1 |
intercerebral commissure | 6.72e-09 | 1 |
dorsal telencephalic commissure | 6.72e-09 | 1 |
brain white matter | 6.72e-09 | 1 |
brain commissure | 6.72e-09 | 1 |
white matter | 6.72e-09 | 1 |
nervous system commissure | 6.72e-09 | 1 |
cerebral hemisphere white matter | 6.72e-09 | 1 |