FFCP PHASE1:Hg19::chr16:30727305..30727313,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:30727305..30727313,+ | |||
|coexpression_cluster_id=C912 | |coexpression_cluster_id=C912 | ||
|description=CAGE_peak_at_chr16:30727305..30727313,+ | |description=CAGE_peak_at_chr16:30727305..30727313,+ | ||
|id=chr16:30727305..30727313,+ | |id=chr16:30727305..30727313,+ | ||
|ontology_enrichment_celltype=CL:0002057!3.83e-78!42;CL:0000860!2.75e-72!45;CL:0000766!4.85e-67!76;CL:0002194!2.30e-60!63;CL:0000576!2.30e-60!63;CL:0000040!2.30e-60!63;CL:0000559!2.30e-60!63;CL:0000839!1.88e-59!70;CL:0000557!1.78e-58!71;CL:0002009!3.23e-58!65;CL:0000738!2.53e-53!140;CL:0002087!1.11e-49!119;CL:0002031!7.04e-45!124;CL:0000763!5.70e-42!112;CL:0000049!5.70e-42!112;CL:0000037!5.34e-41!172;CL:0000566!5.34e-41!172;CL:0000988!4.96e-38!182;CL:0002032!8.50e-38!165;CL:0000837!8.50e-38!165;CL:0000134!7.73e-20!358;CL:0002320!3.46e-19!365;CL:0000219!6.83e-17!390;CL:0000048!3.79e-14!430;CL:0000034!4.44e-14!444;CL:0000723!9.31e-14!436;CL:0000767!3.57e-10!3;CL:0000623!1.52e-09!3;CL:0000825!1.52e-09!3;CL:0000842!2.29e-09!3;CL:0000063!5.19e-08!578;CL:0000224!4.02e-07!4;CL:0002371!7.03e-07!591;CL:0000144!7.86e-07!625 | |ontology_enrichment_celltype=CL:0002057!3.83e-78!42;CL:0000860!2.75e-72!45;CL:0000766!4.85e-67!76;CL:0002194!2.30e-60!63;CL:0000576!2.30e-60!63;CL:0000040!2.30e-60!63;CL:0000559!2.30e-60!63;CL:0000839!1.88e-59!70;CL:0000557!1.78e-58!71;CL:0002009!3.23e-58!65;CL:0000738!2.53e-53!140;CL:0002087!1.11e-49!119;CL:0002031!7.04e-45!124;CL:0000763!5.70e-42!112;CL:0000049!5.70e-42!112;CL:0000037!5.34e-41!172;CL:0000566!5.34e-41!172;CL:0000988!4.96e-38!182;CL:0002032!8.50e-38!165;CL:0000837!8.50e-38!165;CL:0000134!7.73e-20!358;CL:0002320!3.46e-19!365;CL:0000219!6.83e-17!390;CL:0000048!3.79e-14!430;CL:0000034!4.44e-14!444;CL:0000723!9.31e-14!436;CL:0000767!3.57e-10!3;CL:0000623!1.52e-09!3;CL:0000825!1.52e-09!3;CL:0000842!2.29e-09!3;CL:0000063!5.19e-08!578;CL:0000224!4.02e-07!4;CL:0002371!7.03e-07!591;CL:0000144!7.86e-07!625 | ||
|ontology_enrichment_celltype_v019=CL:0000860;7.60e-98;33!CL:0002057;7.60e-98;33!CL:0000473;5.12e-67;39!CL:0000234;5.12e-67;39!CL:0000576;5.36e-44;48!CL:0000766;1.64e-29;69!CL:0000767;2.72e-20;3!CL:0000763;1.05e-14;100!CL:0000094;2.39e-13;8!CL:0002087;2.41e-10;104!CL:0000081;9.41e-10;11!CL:0000738;2.70e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.03e-80,42;CL:0002057,1.03e-80,42;CL:0000473,4.20e-70,48;CL:0000234,4.20e-70,48;CL:0000766,1.87e-62,72;CL:0002194,3.08e-55,59;CL:0000576,3.08e-55,59;CL:0000040,3.08e-55,59;CL:0000559,3.08e-55,59;CL:0002009,2.56e-53,61;CL:0000839,5.06e-49,66;CL:0000557,3.08e-48,67;CL:0000763,2.62e-40,108;CL:0000049,2.62e-40,108;CL:0000738,2.16e-36,136;CL:0002087,1.02e-31,115;CL:0002031,3.22e-30,120;CL:0002032,4.88e-30,161;CL:0000837,4.88e-30,161;CL:0000037,1.35e-28,168;CL:0000988,6.63e-27,177;CL:0000767,3.12e-20,3;CL:0000094,2.47e-13,8;CL:0000134,5.26e-11,354;CL:0002320,1.08e-10,361;CL:0000081,9.65e-10,11;CL:0000219,1.36e-09,386;CL:0000034,1.08e-08,441;CL:0000048,3.04e-08,427;CL:0000723,4.68e-08,433 | |||
|ontology_enrichment_development_v019=CL:0002057;2.97e-63;42!CL:0000049;1.35e-13;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!9.04e-51!80;UBERON:0001474!5.46e-49!86;UBERON:0002390!2.43e-44!102;UBERON:0003061!2.43e-44!102;UBERON:0004765!2.20e-42!101;UBERON:0001434!2.20e-42!101;UBERON:0002193!2.07e-39!112;UBERON:0002405!3.34e-32!115;UBERON:0002204!2.09e-21!167;UBERON:0002384!2.68e-18!375;UBERON:0003081!3.62e-17!216 | |ontology_enrichment_uberon=UBERON:0002371!9.04e-51!80;UBERON:0001474!5.46e-49!86;UBERON:0002390!2.43e-44!102;UBERON:0003061!2.43e-44!102;UBERON:0004765!2.20e-42!101;UBERON:0001434!2.20e-42!101;UBERON:0002193!2.07e-39!112;UBERON:0002405!3.34e-32!115;UBERON:0002204!2.09e-21!167;UBERON:0002384!2.68e-18!375;UBERON:0003081!3.62e-17!216 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.24e-42,76;UBERON:0001474,9.59e-39,82;UBERON:0004765,5.86e-35,90;UBERON:0002405,1.05e-33,93;UBERON:0002390,8.78e-32,98;UBERON:0003061,8.78e-32,98;UBERON:0001434,4.56e-31,100;UBERON:0002193,1.82e-28,108;UBERON:0002204,6.38e-17,167;UBERON:0003081,3.79e-13,203;UBERON:0002384,2.88e-10,371;UBERON:0000926,6.75e-07,315;UBERON:0004120,6.75e-07,315;UBERON:0006603,6.75e-07,315 | |||
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| ||
|short_description=p@chr16:30727305..30727313,+ | |short_description=p@chr16:30727305..30727313,+ | ||
}} | }} |
Latest revision as of 08:17, 25 July 2015
Short description: | p@chr16:30727305..30727313, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:30727305..30727313, + |
Coexpression cluster: | C912_CD14_mesothelioma_tenocyte_migratory_mesenchymal_spleen_CD14CD16 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.03e-80 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.03e-80 | 42 |
defensive cell | 4.20e-70 | 48 |
phagocyte | 4.20e-70 | 48 |
myeloid leukocyte | 1.87e-62 | 72 |
monopoietic cell | 3.08e-55 | 59 |
monocyte | 3.08e-55 | 59 |
monoblast | 3.08e-55 | 59 |
promonocyte | 3.08e-55 | 59 |
macrophage dendritic cell progenitor | 2.56e-53 | 61 |
myeloid lineage restricted progenitor cell | 5.06e-49 | 66 |
granulocyte monocyte progenitor cell | 3.08e-48 | 67 |
myeloid cell | 2.62e-40 | 108 |
common myeloid progenitor | 2.62e-40 | 108 |
leukocyte | 2.16e-36 | 136 |
nongranular leukocyte | 1.02e-31 | 115 |
hematopoietic lineage restricted progenitor cell | 3.22e-30 | 120 |
hematopoietic oligopotent progenitor cell | 4.88e-30 | 161 |
hematopoietic multipotent progenitor cell | 4.88e-30 | 161 |
hematopoietic stem cell | 1.35e-28 | 168 |
hematopoietic cell | 6.63e-27 | 177 |
basophil | 3.12e-20 | 3 |
granulocyte | 2.47e-13 | 8 |
mesenchymal cell | 5.26e-11 | 354 |
connective tissue cell | 1.08e-10 | 361 |
blood cell | 9.65e-10 | 11 |
motile cell | 1.36e-09 | 386 |
stem cell | 1.08e-08 | 441 |
multi fate stem cell | 3.04e-08 | 427 |
somatic stem cell | 4.68e-08 | 433 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.24e-42 | 76 |
bone element | 9.59e-39 | 82 |
skeletal element | 5.86e-35 | 90 |
immune system | 1.05e-33 | 93 |
hematopoietic system | 8.78e-32 | 98 |
blood island | 8.78e-32 | 98 |
skeletal system | 4.56e-31 | 100 |
hemolymphoid system | 1.82e-28 | 108 |
musculoskeletal system | 6.38e-17 | 167 |
lateral plate mesoderm | 3.79e-13 | 203 |
connective tissue | 2.88e-10 | 371 |
mesoderm | 6.75e-07 | 315 |
mesoderm-derived structure | 6.75e-07 | 315 |
presumptive mesoderm | 6.75e-07 | 315 |