FFCP PHASE1:Hg19::chr16:55523690..55523729,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:55523690..55523729,- | |||
|coexpression_cluster_id=C351 | |coexpression_cluster_id=C351 | ||
|description=CAGE_peak_at_chr16:55523690..55523729,- | |description=CAGE_peak_at_chr16:55523690..55523729,- | ||
|id=chr16:55523690..55523729,- | |id=chr16:55523690..55523729,- | ||
|ontology_enrichment_celltype=CL:0000055!2.00e-35!180;CL:0000057!1.62e-16!75;CL:0000680!2.76e-14!57;CL:0000056!2.76e-14!57;CL:0000355!2.76e-14!57;CL:0000183!2.12e-13!59;CL:0000187!8.52e-13!54;CL:0000192!2.41e-11!42;CL:0000514!2.41e-11!42;CL:0000393!7.23e-11!60;CL:0000211!7.23e-11!60;CL:0000222!5.49e-10!119;CL:0002371!1.36e-09!591;CL:0000359!4.01e-09!32;CL:0000144!1.47e-08!625;CL:0002334!2.61e-07!12;CL:0002620!3.51e-07!23;CL:0002539!7.29e-07!10 | |ontology_enrichment_celltype=CL:0000055!2.00e-35!180;CL:0000057!1.62e-16!75;CL:0000680!2.76e-14!57;CL:0000056!2.76e-14!57;CL:0000355!2.76e-14!57;CL:0000183!2.12e-13!59;CL:0000187!8.52e-13!54;CL:0000192!2.41e-11!42;CL:0000514!2.41e-11!42;CL:0000393!7.23e-11!60;CL:0000211!7.23e-11!60;CL:0000222!5.49e-10!119;CL:0002371!1.36e-09!591;CL:0000359!4.01e-09!32;CL:0000144!1.47e-08!625;CL:0002334!2.61e-07!12;CL:0002620!3.51e-07!23;CL:0002539!7.29e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0002334;1.60e-10;12!CL:0000048;4.03e-09;58!CL:0000134;5.77e-09;55!CL:0000723;1.29e-08;61!CL:0000359;3.85e-08;32!CL:0000192;2.93e-07;43!CL:0002539;4.02e-07;10!CL:0002620;6.96e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.37e-14,76;CL:0000048,2.58e-13,427;CL:0000723,1.22e-12,433;CL:0000034,8.86e-12,441;CL:0000680,5.53e-11,58;CL:0000056,5.53e-11,58;CL:0000355,5.53e-11,58;CL:0002334,7.46e-11,12;CL:0000192,3.11e-09,43;CL:0000514,3.11e-09,43;CL:0000187,3.24e-09,55;CL:0000359,3.21e-08,32;CL:0000393,1.58e-07,61;CL:0000211,1.58e-07,61;CL:0002320,2.83e-07,361;CL:0002539,3.41e-07,10;CL:0002620,7.52e-07,23 | |||
|ontology_enrichment_development_v019=CL:0000514;2.93e-07;43 | |||
|ontology_enrichment_disease=DOID:2394!5.55e-07!14 | |ontology_enrichment_disease=DOID:2394!5.55e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;4.27e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.70e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!7.58e-16!83;UBERON:0002329!7.58e-16!83;UBERON:0003077!7.58e-16!83;UBERON:0003059!7.58e-16!83;UBERON:0007282!7.58e-16!83;UBERON:0009618!7.58e-16!83;UBERON:0007285!7.58e-16!83;UBERON:0000486!1.60e-15!82;UBERON:0004290!5.67e-15!70;UBERON:0002385!1.11e-14!63;UBERON:0001015!1.11e-14!63;UBERON:0000383!1.11e-14!63;UBERON:0001134!2.01e-14!61;UBERON:0002036!2.01e-14!61;UBERON:0003082!2.01e-14!61;UBERON:0004872!3.43e-14!84;UBERON:0001637!5.81e-13!42;UBERON:0003509!5.81e-13!42;UBERON:0004572!5.81e-13!42;UBERON:0001981!2.44e-12!60;UBERON:0007500!2.44e-12!60;UBERON:0004537!2.44e-12!60;UBERON:0006965!2.44e-12!60;UBERON:0002049!2.52e-11!79;UBERON:0007798!2.52e-11!79;UBERON:0004573!5.09e-11!33;UBERON:0004571!5.09e-11!33;UBERON:0000055!3.72e-10!69;UBERON:0005256!3.80e-10!143;UBERON:0000490!5.63e-10!138;UBERON:0001009!2.89e-09!113;UBERON:0004535!3.32e-09!110;UBERON:0000947!3.47e-09!21;UBERON:0010191!3.47e-09!21;UBERON:0003914!9.63e-09!118;UBERON:0001135!7.50e-08!15;UBERON:0002100!6.12e-07!216;UBERON:0004237!7.29e-07!10;UBERON:0004695!7.29e-07!10;UBERON:0002111!7.29e-07!10;UBERON:0004178!7.29e-07!10 | |ontology_enrichment_uberon=UBERON:0000914!7.58e-16!83;UBERON:0002329!7.58e-16!83;UBERON:0003077!7.58e-16!83;UBERON:0003059!7.58e-16!83;UBERON:0007282!7.58e-16!83;UBERON:0009618!7.58e-16!83;UBERON:0007285!7.58e-16!83;UBERON:0000486!1.60e-15!82;UBERON:0004290!5.67e-15!70;UBERON:0002385!1.11e-14!63;UBERON:0001015!1.11e-14!63;UBERON:0000383!1.11e-14!63;UBERON:0001134!2.01e-14!61;UBERON:0002036!2.01e-14!61;UBERON:0003082!2.01e-14!61;UBERON:0004872!3.43e-14!84;UBERON:0001637!5.81e-13!42;UBERON:0003509!5.81e-13!42;UBERON:0004572!5.81e-13!42;UBERON:0001981!2.44e-12!60;UBERON:0007500!2.44e-12!60;UBERON:0004537!2.44e-12!60;UBERON:0006965!2.44e-12!60;UBERON:0002049!2.52e-11!79;UBERON:0007798!2.52e-11!79;UBERON:0004573!5.09e-11!33;UBERON:0004571!5.09e-11!33;UBERON:0000055!3.72e-10!69;UBERON:0005256!3.80e-10!143;UBERON:0000490!5.63e-10!138;UBERON:0001009!2.89e-09!113;UBERON:0004535!3.32e-09!110;UBERON:0000947!3.47e-09!21;UBERON:0010191!3.47e-09!21;UBERON:0003914!9.63e-09!118;UBERON:0001135!7.50e-08!15;UBERON:0002100!6.12e-07!216;UBERON:0004237!7.29e-07!10;UBERON:0004695!7.29e-07!10;UBERON:0002111!7.29e-07!10;UBERON:0004178!7.29e-07!10 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.41e-12;33!UBERON:0004571;2.41e-12;33!UBERON:0000947;4.75e-11;21!UBERON:0010191;4.75e-11;21!UBERON:0001637;2.33e-10;42!UBERON:0003509;2.33e-10;42!UBERON:0004572;2.33e-10;42!UBERON:0002384;2.72e-07;198!UBERON:0001135;3.39e-07;15!UBERON:0004237;4.02e-07;10!UBERON:0004695;4.02e-07;10!UBERON:0002111;4.02e-07;10!UBERON:0004178;4.02e-07;10!UBERON:0002385;4.53e-07;31!UBERON:0001015;4.53e-07;31!UBERON:0000383;4.53e-07;31!UBERON:0001013;9.31e-07;14 | |||
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| ||
|short_description=p@chr16:55523690..55523729,- | |short_description=p@chr16:55523690..55523729,- | ||
}} | }} |
Latest revision as of 09:52, 25 July 2015
Short description: | p@chr16:55523690..55523729, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:55523690..55523729, - |
Coexpression cluster: | C351_Fibroblast_Smooth_mesenchymal_Adipocyte_tenocyte_Synoviocyte_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.37e-14 | 76 |
multi fate stem cell | 2.58e-13 | 427 |
somatic stem cell | 1.22e-12 | 433 |
stem cell | 8.86e-12 | 441 |
muscle precursor cell | 5.53e-11 | 58 |
myoblast | 5.53e-11 | 58 |
multi-potent skeletal muscle stem cell | 5.53e-11 | 58 |
preadipocyte | 7.46e-11 | 12 |
smooth muscle cell | 3.11e-09 | 43 |
smooth muscle myoblast | 3.11e-09 | 43 |
muscle cell | 3.24e-09 | 55 |
vascular associated smooth muscle cell | 3.21e-08 | 32 |
electrically responsive cell | 1.58e-07 | 61 |
electrically active cell | 1.58e-07 | 61 |
connective tissue cell | 2.83e-07 | 361 |
aortic smooth muscle cell | 3.41e-07 | 10 |
skin fibroblast | 7.52e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.70e-09 | 14 |