FFCP PHASE1:Hg19::chr16:85768839..85768872,-: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr16:85768839..85768872,- to FFCP PHASE1:Hg19::chr16:85768839..85768872,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:85768839..85768872,- | |||
|coexpression_cluster_id=C23 | |||
|description=CAGE_peak_at_chr16:85768839..85768872,- | |||
|id=chr16:85768839..85768872,- | |||
|ontology_enrichment_celltype=CL:0000542!1.06e-36!53;CL:0000051!1.06e-36!53;CL:0000838!1.41e-35!52;CL:0000791!8.50e-30!18;CL:0000789!8.50e-30!18;CL:0002420!8.50e-30!18;CL:0002419!8.50e-30!18;CL:0000790!8.50e-30!18;CL:0000084!1.36e-29!25;CL:0000827!1.36e-29!25;CL:0002087!1.46e-28!119;CL:0000738!6.54e-25!140;CL:0002031!8.05e-22!124;CL:0000037!9.69e-22!172;CL:0000566!9.69e-22!172;CL:0000988!2.23e-20!182;CL:0002032!2.66e-19!165;CL:0000837!2.66e-19!165;CL:0000625!7.90e-19!11;CL:0000624!1.62e-11!6;CL:0000236!5.72e-08!14;CL:0000945!3.70e-07!24;CL:0000826!3.70e-07!24;CL:0000898!8.61e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.75e-47;18!CL:0000789;1.75e-47;18!CL:0002419;1.75e-47;18!CL:0000084;6.50e-42;25!CL:0000625;1.17e-30;11!CL:0000542;5.84e-23;53!CL:0000624;1.47e-21;6!CL:0000898;4.16e-12;3!CL:0000226;1.43e-10;3!CL:0000842;1.43e-10;3!CL:0000815;9.93e-09;2!CL:0000792;9.93e-09;2!CL:0002677;9.93e-09;2!CL:0002087;5.14e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.70e-47,18;CL:0000789,1.70e-47,18;CL:0002420,1.70e-47,18;CL:0002419,1.70e-47,18;CL:0000790,1.70e-47,18;CL:0000084,6.37e-42,25;CL:0000827,6.37e-42,25;CL:0000838,1.46e-38,52;CL:0000542,1.05e-37,53;CL:0000051,1.05e-37,53;CL:0000625,1.31e-30,11;CL:0000624,1.25e-21,6;CL:0002087,1.36e-20,115;CL:0000738,2.95e-16,136;CL:0002031,3.27e-15,120;CL:0000037,8.76e-14,168;CL:0000988,1.09e-12,177;CL:0000898,4.09e-12,3;CL:0002032,1.63e-11,161;CL:0000837,1.63e-11,161;CL:0000226,1.56e-10,3;CL:0000842,1.56e-10,3;CL:0000815,9.94e-09,2;CL:0000792,9.94e-09,2;CL:0002677,9.94e-09,2 | |||
|ontology_enrichment_development_v019=CL:0000790;1.75e-47;18!CL:0000051;5.84e-23;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!6.61e-12!15;UBERON:0000179!6.61e-12!15;UBERON:0000463!6.61e-12!15;UBERON:0002390!4.83e-08!102;UBERON:0003061!4.83e-08!102;UBERON:0002193!6.52e-08!112;UBERON:0004177!1.90e-07!7;UBERON:0002370!9.27e-07!4;UBERON:0005058!9.27e-07!4;UBERON:0009113!9.27e-07!4;UBERON:0003295!9.27e-07!4;UBERON:0005562!9.27e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.03e-16;15!UBERON:0000179;2.03e-16;15!UBERON:0000463;2.03e-16;15!UBERON:0002390;8.70e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.35e-16,15;UBERON:0000179,2.35e-16,15;UBERON:0000463,2.35e-16,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.383829398097213,0.309632246632152,0,0,0.369754010166788,7.35938405512865,0.995184627411951,0.880801318004542,0.553995408531877,1.00272223735071,0.434021741431704,0.223915474239924,1.29557466407592,0,0,0.377875943688809,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0.272906150057846,0,0,0.320929027076094,0,0,0.398927315243264,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0.209658645508376,0.22465726229299,0.300353785683013,0,0.285012743741249,0,0,0,1.63841583378639,0.889509253863555,2.56038133539904,0.800791974072025,0,1.98313461835459,0.954053754535364,1.1384259382189,0,1.14681968437569,1.32171328579026,0.560508562981536,0.526768169550154,3.73748563216283,3.93010762749165,3.70082698199117,10.0311897234407,19.881258264649,28.8803161498187,33.1205438293449,7.79873198196215,17.0871426335406,20.6026521962768,20.5810936461412,7.17311390463781,6.89314542067355,1.64437904603676,4.69795030235942,3.76744011455568,9.93519973185805,11.7717964359474,6.27213142829861,2.71942422474159,7.66440987203842,8.93431358254838,5.06039384039006,9.875527844047,8.46408490013344,2.85135613334512,5.87242964403314,6.2713439465665,6.24653632761729,3.31488152861624,3.28451198768419,2.41928091869679,0.802320587350522,3.18613688542158,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336255431980582,0.985153801009636,1.72502059887614,1.15508732651774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,2.48121631347465,1.50999940573032,2.02782359826544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368323955743585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0.0962221127255121,0.670302275535787,0,0,0,0,0,0,2.02979043692868,0.764637207142375,2.27858874869665,2.62054953003568,2.05681136543097,0.648473311192717,1.62009431171434,2.37937552888281,0,0,0,0.371606350251437,0,1.42283686696828,0.159426272728822,0,0,0,0,1.12318871245384,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0.976940477010201,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0.828851746593443,0,0,0,0,0,0,1.53471711068062,0.0986434056369336,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,4.08773192782946,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19472429772959,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48083010905975,0.592834895693833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0.0939839179798536,0.45120521581504,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516711278688049,0.558672428662721,0,0,0,0,0,0.404112318087525,0,0,0,0,0,0,0,0.122241444182866,0,0,0.603821380773079,0 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| ||
|short_description=p@chr16:85768839..85768872,- | |||
}} | }} |
Latest revision as of 13:02, 25 July 2015
Short description: | p@chr16:85768839..85768872, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:85768839..85768872, - |
Coexpression cluster: | C23_CD4_CD8_Natural_Peripheral_Basophils_CD19_CD14 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.70e-47 | 18 |
alpha-beta T cell | 1.70e-47 | 18 |
immature T cell | 1.70e-47 | 18 |
mature T cell | 1.70e-47 | 18 |
immature alpha-beta T cell | 1.70e-47 | 18 |
T cell | 6.37e-42 | 25 |
pro-T cell | 6.37e-42 | 25 |
lymphoid lineage restricted progenitor cell | 1.46e-38 | 52 |
lymphocyte | 1.05e-37 | 53 |
common lymphoid progenitor | 1.05e-37 | 53 |
CD8-positive, alpha-beta T cell | 1.31e-30 | 11 |
CD4-positive, alpha-beta T cell | 1.25e-21 | 6 |
nongranular leukocyte | 1.36e-20 | 115 |
leukocyte | 2.95e-16 | 136 |
hematopoietic lineage restricted progenitor cell | 3.27e-15 | 120 |
hematopoietic stem cell | 8.76e-14 | 168 |
hematopoietic cell | 1.09e-12 | 177 |
naive T cell | 4.09e-12 | 3 |
hematopoietic oligopotent progenitor cell | 1.63e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.63e-11 | 161 |
single nucleate cell | 1.56e-10 | 3 |
mononuclear cell | 1.56e-10 | 3 |
regulatory T cell | 9.94e-09 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 9.94e-09 | 2 |
naive regulatory T cell | 9.94e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 2.35e-16 | 15 |
haemolymphatic fluid | 2.35e-16 | 15 |
organism substance | 2.35e-16 | 15 |