FFCP PHASE1:Hg19::chr16:87417524..87417546,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr16:87417524..87417546,+ | |||
|description=CAGE_peak_at_chr16:87417524..87417546,+ | |||
|id=chr16:87417524..87417546,+ | |||
|ontology_enrichment_celltype=CL:0000791!7.60e-11!18;CL:0000789!7.60e-11!18;CL:0002420!7.60e-11!18;CL:0002419!7.60e-11!18;CL:0000790!7.60e-11!18;CL:0000625!1.09e-09!11;CL:0000084!2.39e-08!25;CL:0000827!2.39e-08!25;CL:0002087!2.45e-08!119;CL:0000738!2.68e-08!140;CL:0000838!8.57e-08!52;CL:0002031!8.82e-08!124;CL:0000542!1.95e-07!53;CL:0000051!1.95e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.26e-20;18!CL:0000789;1.26e-20;18!CL:0002419;1.26e-20;18!CL:0000625;4.56e-17;11!CL:0000084;2.66e-14;25!CL:0000898;4.48e-13;3!CL:0000542;3.55e-12;53!CL:0000236;1.23e-10;13!CL:0000815;6.20e-09;2!CL:0000792;6.20e-09;2!CL:0002600;6.20e-09;2!CL:0002677;6.20e-09;2!CL:0000624;9.60e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,6.80e-21,18;CL:0000789,6.80e-21,18;CL:0002420,6.80e-21,18;CL:0002419,6.80e-21,18;CL:0000790,6.80e-21,18;CL:0000625,3.60e-17,11;CL:0000838,2.69e-16,52;CL:0000542,6.42e-16,53;CL:0000051,6.42e-16,53;CL:0000084,1.73e-14,25;CL:0000827,1.73e-14,25;CL:0000898,2.06e-13,3;CL:0000236,6.78e-10,14;CL:0000815,2.87e-09,2;CL:0000792,2.87e-09,2;CL:0002677,2.87e-09,2;CL:0002087,3.69e-09,115;CL:0002600,7.64e-09,2;CL:0002031,1.35e-08,120;CL:0000738,5.56e-08,136;CL:0000624,6.61e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000790;1.26e-20;18!CL:0000051;3.55e-12;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.54e-08!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p@chr16:87417524..87417546,+ | |||
}} |
Latest revision as of 13:10, 25 July 2015
Short description: | p@chr16:87417524..87417546, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:87417524..87417546, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 6.80e-21 | 18 |
alpha-beta T cell | 6.80e-21 | 18 |
immature T cell | 6.80e-21 | 18 |
mature T cell | 6.80e-21 | 18 |
immature alpha-beta T cell | 6.80e-21 | 18 |
CD8-positive, alpha-beta T cell | 3.60e-17 | 11 |
lymphoid lineage restricted progenitor cell | 2.69e-16 | 52 |
lymphocyte | 6.42e-16 | 53 |
common lymphoid progenitor | 6.42e-16 | 53 |
T cell | 1.73e-14 | 25 |
pro-T cell | 1.73e-14 | 25 |
naive T cell | 2.06e-13 | 3 |
B cell | 6.78e-10 | 14 |
regulatory T cell | 2.87e-09 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 2.87e-09 | 2 |
naive regulatory T cell | 2.87e-09 | 2 |
nongranular leukocyte | 3.69e-09 | 115 |
smooth muscle cell of trachea | 7.64e-09 | 2 |
hematopoietic lineage restricted progenitor cell | 1.35e-08 | 120 |
leukocyte | 5.56e-08 | 136 |
CD4-positive, alpha-beta T cell | 6.61e-07 | 6 |