FFCP PHASE1:Hg19::chr16:8945862..8945865,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:8945862..8945865,+ | |||
|description=CAGE_peak_at_chr16:8945862..8945865,+ | |description=CAGE_peak_at_chr16:8945862..8945865,+ | ||
|id=chr16:8945862..8945865,+ | |id=chr16:8945862..8945865,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008801;4.28e-07;1!UBERON:0005754;4.28e-07;1!UBERON:0005425;4.28e-07;1 | |ontology_enrichment_development_v019=UBERON:0008801;4.28e-07;1!UBERON:0005754;4.28e-07;1!UBERON:0005425;4.28e-07;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:178;4.28e-07;1!DOID:326;4.28e-07;1!DOID:3978;4.28e-07;1!DOID:3394;4.28e-07;1!DOID:5844;4.28e-07;1 | |ontology_enrichment_disease_v019=DOID:178;4.28e-07;1!DOID:326;4.28e-07;1!DOID:3978;4.28e-07;1!DOID:3394;4.28e-07;1!DOID:5844;4.28e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:178,5.14e-07,1;DOID:326,5.14e-07,1;DOID:3978,5.14e-07,1;DOID:3394,5.14e-07,1;DOID:5844,5.14e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!6.12e-10!115 | |ontology_enrichment_uberon=UBERON:0007023!6.12e-10!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0009663;5.87e-08;7!UBERON:0002134;1.54e-07;1!UBERON:0005208;1.54e-07;1!UBERON:0004145;1.54e-07;1!UBERON:0005946;1.54e-07;1!UBERON:0005965;1.54e-07;1!UBERON:0002078;1.54e-07;1!UBERON:0000029;4.28e-07;1!UBERON:0002038;4.28e-07;1!UBERON:0001831;4.28e-07;1!UBERON:0000998;4.28e-07;1!UBERON:0000941;4.28e-07;1!UBERON:0001785;4.28e-07;1!UBERON:0002464;4.28e-07;1!UBERON:0004904;4.28e-07;1!UBERON:0006868;4.28e-07;1!UBERON:0001021;4.28e-07;1!UBERON:0009661;4.28e-07;1!UBERON:0002950;4.28e-07;1!UBERON:0001567;4.28e-07;1!UBERON:0001891;4.28e-07;1 | |ontology_enrichment_uberon_v019=UBERON:0009663;5.87e-08;7!UBERON:0002134;1.54e-07;1!UBERON:0005208;1.54e-07;1!UBERON:0004145;1.54e-07;1!UBERON:0005946;1.54e-07;1!UBERON:0005965;1.54e-07;1!UBERON:0002078;1.54e-07;1!UBERON:0000029;4.28e-07;1!UBERON:0002038;4.28e-07;1!UBERON:0001831;4.28e-07;1!UBERON:0000998;4.28e-07;1!UBERON:0000941;4.28e-07;1!UBERON:0001785;4.28e-07;1!UBERON:0002464;4.28e-07;1!UBERON:0004904;4.28e-07;1!UBERON:0006868;4.28e-07;1!UBERON:0001021;4.28e-07;1!UBERON:0009661;4.28e-07;1!UBERON:0002950;4.28e-07;1!UBERON:0001567;4.28e-07;1!UBERON:0001891;4.28e-07;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0009663,3.15e-08,7;UBERON:0002134,1.55e-07,1;UBERON:0005208,1.55e-07,1;UBERON:0005946,1.55e-07,1;UBERON:0005965,1.55e-07,1;UBERON:0002078,1.55e-07,1;UBERON:0000029,2.10e-07,1;UBERON:0000941,2.52e-07,1;UBERON:0001785,2.52e-07,1;UBERON:0002464,2.52e-07,1;UBERON:0004904,2.52e-07,1;UBERON:0001021,2.52e-07,1;UBERON:0003902,2.52e-07,1;UBERON:0005425,2.52e-07,1;UBERON:0007023,3.27e-07,114;UBERON:0002038,3.60e-07,1;UBERON:0009661,3.60e-07,1;UBERON:0002950,3.60e-07,1;UBERON:0001891,3.60e-07,1;UBERON:0009616,3.60e-07,1;UBERON:0010286,3.60e-07,1;UBERON:0000998,3.82e-07,1;UBERON:0006868,3.82e-07,1;UBERON:0001831,6.49e-07,1;UBERON:0001567,6.49e-07,1;UBERON:0008801,6.49e-07,1 | |||
|phase1_expression=0.54503513781167,0.428201047781966,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0.753255837568817,1.06978768047132,0.57470412614962,0.708397031823113,0.393364276848904,0,0,0,0,0,0.387336002901508,0.426507697462265,0,0,0,1.30206522429511,0.223915474239924,0.32389366601898,0,0.436194716338694,0,0.242584061187816,0,0,0,0,0.256160706529101,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0.398927315243264,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0.546138611262131,0,0,0,0.574752439954483,0,0,0,0.587237189370939,0,0,0,0,0.393419540227666,0,0,0,0,0.473447805734733,0,0.111410456885174,0.294605907474837,0.221533894583621,0,0.25618263945135,0.130059347559878,0.164437904603676,0,0,0.14828656316206,0.267540828089713,0,0,0,0.34362744548263,0,0,0.651083453856419,0,0.150575119077773,0,0,0.473554504088034,0,0.201606743224732,0.534880391567015,0.434473211648397,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0.189069634328136,0.221729397462564,1.40535657109002,0.327447688744282,0,0,0.324547393654683,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267899184852239,0.22452937262617,0,0,0,0,0,0,0,0,0.25326102332916,0.132409180813219,0,0.354668382198357,0,0,0.24666754841716,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0,0.161872944368132,0,0.204154171254893,0.245668634623536,0.103325781175765,1.18800285728205,0,0,0,0.336672227908132,0,0,0,0.30648779579902,0,0,0,0,0.211931901159562,0,0.103052529238439,0,0,0.337552664482532,0.0974370051611986,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0.504641701751257,0,0,0,0,1.39310378409594,0,0.118306800039844,0,0.241011029883482,0.330881918197182,0,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0.441463099414651,0.245976877086227,0,0.219500570817251,0,0,0.0925884451585296,0,0,0,0.231860809950154,0.117408694235822,0.288732895522148,0,0,0,0,0.492434012174795,0,0,0,0,0.141775097242386,0.179117045405697,0.290633938513962,0,0,0.352193736052904,0,0.720599767084807,0.50496973370552,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0.266422179016099,0.285955987316295,0,0,0.325736184293735,0.355391948742546,0,0,0.871533458600294,0,0,0,0,0,0,0,0.289562613335158,0,0,0,0.788123040807709,0.646882724578552,0.898401253958239,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0.207970861530807,0,0.315404830067869,0,0,0,0,0,0,0.347534457872331,0,0,0.206768026122887,0.647142602455851,0.426910231213777,0,0,0.604780586659361,0,1.07423381301644,0,0,0,0.321707842287215,0,0.308419387605311,0.177561725313127,0.0821271560138091,0,0,0.120859449591622,0,0.276242966807689,0.114814448164607,0.182091168006717,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0.219259876645935,0,0,0,0,0.206082023295445,0.183138929636687,0.165018999841176,0,0,0,0.193341436584244,0.154048617114644,0,0.137836572484531,0.107420244868274,0,0,0.0890320356467374,0.330569830721956,0.192190067365106,0.255225424989168,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0.38126038784765,0,0,0,0,0.179872457583315,0.274537029736055,0.235624804691373,0,0,0,0,0.731140468893853,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0.286822704408103,0,0,0,0.422215270595328,0,0.379473173765715,0,0,0,0,0.282431402330337,0,0,0,0.229723400206959,0,0.764637207142375,0.569647187174163,0.714695326373367,0.411362273086194,0,0,0.79312517629427,0.320472213382419,0,0.245040215981032,0,0.144269212976445,0.355709216742071,0,0.59873811429845,0.191505370132367,0,0,0,0.228234679033192,0.313359791546046,0,0,0,0.403599414382095,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0,0.36408156524854,0.445773537109913,0.284136146806413,0.23874448473769,0,0,0,0.140669416410513,0.111308705022906,0.494411622680279,0.844501632511974,1.39473591775749,0,1.0077309914171,0,0.246169610922139,0,0.179736702294654,1.25314822272926,1.02314474045374,0,0,0,1.93866549219044,0.0927680981618513,0,0,0.349839999984783,0,0.682760689712998,0,0.236387681767936,0.689486746482929,1.45802306691627,0,0,1.4471572635049,0,0.774054819518572,0.295547618953547,0,0.544692317594951,0.278847488557207,0.307801034015188,0.227884111694002,0.69169171316418,0,0.108647371922008,0,0.0915975934018623,0,0,0.156980256395025,0,0,0,0.167821586975843,0.189753732724185,0,0.843992258112108,0.163232808159148,0,0,0.995261931078505,0.176915129006678,0.611030144933625,0,0.617819694732514,0.313265848516366,0.404406797884062,0,0.234264445725339,0.547364367646998,0,0,0.394584402849391,1.20990716048664,0,0.505492637027904,0,0.207376382794494,0,0,0.313932918407225,0,0.284609546029793,0.138674673013139,0,0,0.261177619741208,0.52418000472609,0.171986032471617,0.677294319023596,0.584714536689484,0.656923656425674,0.0969890164884194,0.176512253383001,0.677942222341597,0.685209623233754,0.397429223405979,0.189932387867636,0,0.0801588202515337,0,0,0.144090417154106,0.343609788497747,0.514784993585894,1.00838358591705,0.372757606696298,0,0,0.209205692624666,0.101998217636322,0,0,1.50595916781192,0,0,0.788662062837943,0.279282401272254,0.4583208480233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| ||
|short_description=p@chr16:8945862..8945865,+ | |short_description=p@chr16:8945862..8945865,+ | ||
}} | }} |
Latest revision as of 13:27, 25 July 2015
Short description: | p@chr16:8945862..8945865, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:8945862..8945865, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
telencephalic nucleus | 3.15e-08 | 7 |
tricuspid valve | 1.55e-07 | 1 |
right atrium valve | 1.55e-07 | 1 |
outflow tract of atrium | 1.55e-07 | 1 |
outflow part of right atrium | 1.55e-07 | 1 |
right cardiac atrium | 1.55e-07 | 1 |
lymph node | 2.10e-07 | 1 |
cranial nerve II | 2.52e-07 | 1 |
cranial nerve | 2.52e-07 | 1 |
nerve trunk | 2.52e-07 | 1 |
nerve connecting eye with brain | 2.52e-07 | 1 |
nerve | 2.52e-07 | 1 |
retinal neural layer | 2.52e-07 | 1 |
presumptive neural retina | 2.52e-07 | 1 |
adult organism | 3.27e-07 | 114 |
substantia nigra | 3.60e-07 | 1 |
midbrain nucleus | 3.60e-07 | 1 |
regional part of midbrain | 3.60e-07 | 1 |
midbrain | 3.60e-07 | 1 |
presumptive midbrain | 3.60e-07 | 1 |
midbrain neural tube | 3.60e-07 | 1 |
seminal vesicle | 3.82e-07 | 1 |
seminal fluid secreting gland | 3.82e-07 | 1 |
parotid gland | 6.49e-07 | 1 |
cheek | 6.49e-07 | 1 |
parotid gland primordium | 6.49e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
vascular disease | 5.14e-07 | 1 |
ischemia | 5.14e-07 | 1 |
extrinsic cardiomyopathy | 5.14e-07 | 1 |
myocardial ischemia | 5.14e-07 | 1 |
myocardial infarction | 5.14e-07 | 1 |