FFCP PHASE1:Hg19::chr17:1552518..1552538,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:1552518..1552538,+ to FFCP PHASE1:Hg19::chr17:1552518..1552538,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:1552518..1552538,+ | |||
|description=CAGE_peak_at_chr17:1552518..1552538,+ | |||
|id=chr17:1552518..1552538,+ | |||
|ontology_enrichment_celltype=CL:0000860!8.39e-32!45;CL:0002057!9.97e-32!42;CL:0000839!1.37e-31!70;CL:0000766!9.65e-31!76;CL:0002194!2.51e-29!63;CL:0000576!2.51e-29!63;CL:0000040!2.51e-29!63;CL:0000559!2.51e-29!63;CL:0002009!3.20e-29!65;CL:0000557!5.35e-29!71;CL:0000763!7.70e-27!112;CL:0000049!7.70e-27!112;CL:0000037!2.93e-19!172;CL:0000566!2.93e-19!172;CL:0000738!5.25e-19!140;CL:0000988!6.28e-19!182;CL:0002031!1.91e-17!124;CL:0002032!2.79e-17!165;CL:0000837!2.79e-17!165;CL:0002087!4.86e-16!119;CL:0002393!1.32e-08!9;CL:0002397!1.32e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.21e-48;33!CL:0002057;3.21e-48;33!CL:0000576;3.42e-43;48!CL:0000473;2.26e-37;39!CL:0000234;2.26e-37;39!CL:0000766;2.12e-30;69!CL:0002393;4.40e-19;6!CL:0002397;4.40e-19;6!CL:0000763;1.06e-14;100!CL:0002087;5.91e-10;104!CL:0000764;5.83e-08;2!CL:0000558;5.83e-08;2!CL:0000738;4.80e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.03e-75,42;CL:0002057,2.03e-75,42;CL:0000473,3.99e-69,48;CL:0000234,3.99e-69,48;CL:0000839,1.62e-63,66;CL:0000766,5.38e-60,72;CL:0000557,1.79e-58,67;CL:0002009,6.67e-58,61;CL:0002194,1.08e-56,59;CL:0000576,1.08e-56,59;CL:0000040,1.08e-56,59;CL:0000559,1.08e-56,59;CL:0000763,3.90e-53,108;CL:0000049,3.90e-53,108;CL:0002031,2.22e-32,120;CL:0002032,6.64e-32,161;CL:0000837,6.64e-32,161;CL:0000037,4.25e-30,168;CL:0000738,1.06e-28,136;CL:0000988,5.51e-28,177;CL:0002087,9.12e-25,115;CL:0002393,5.54e-22,9;CL:0002397,5.54e-22,9;CL:0000134,4.52e-11,354;CL:0002320,1.25e-10,361;CL:0000219,4.48e-09,386;CL:0000764,4.95e-08,2;CL:0000765,4.95e-08,2;CL:0000050,4.95e-08,2;CL:0000038,4.95e-08,2;CL:0000558,4.95e-08,2;CL:0000547,4.95e-08,2;CL:0000549,4.95e-08,2;CL:0000550,4.95e-08,2;CL:0000552,4.95e-08,2;CL:0000048,3.38e-07,427;CL:0000034,3.87e-07,441;CL:0000723,6.10e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;2.90e-52;42!CL:0000049;2.18e-13;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.18e-27!102;UBERON:0003061!1.18e-27!102;UBERON:0002193!1.72e-24!112;UBERON:0002371!9.10e-24!80;UBERON:0001474!2.38e-20!86;UBERON:0002405!1.73e-17!115;UBERON:0004765!3.90e-15!101;UBERON:0001434!3.90e-15!101;UBERON:0003081!5.11e-12!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.90e-50,76;UBERON:0001474,4.60e-46,82;UBERON:0002390,5.40e-44,98;UBERON:0003061,5.40e-44,98;UBERON:0004765,4.02e-41,90;UBERON:0002405,1.74e-39,93;UBERON:0002193,5.67e-39,108;UBERON:0001434,4.76e-36,100;UBERON:0003081,2.11e-20,203;UBERON:0002204,1.00e-17,167;UBERON:0000926,4.72e-10,315;UBERON:0004120,4.72e-10,315;UBERON:0006603,4.72e-10,315;UBERON:0002384,5.02e-10,371 | |||
|phase1_expression=0.181678379270557,0.856402095563933,0.140954404095971,0,2.23480547213644,0,0,0,0.783556884599516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0,0.786728553697808,0,1.08371286321253,0,0,0,0,0,0.293600439334847,3.87796785972314,3.60980005446255,4.99125002646459,0.671746422719773,1.29557466407592,0.515151135268373,0.581592955118259,0,1.94067248950253,0.697287110717054,3.28934310417461,2.78735733805593,5.46615545412086,3.58624989140741,3.54723344832878,2.41321976515633,3.87290810150296,10.8341189275473,3.38836211176688,2.45615535052061,1.34834090667051,1.83650335422542,0.641858054152187,3.19668562899521,2.96866170168044,0.797854630486527,0.852449501065388,2.03146467040009,1.13477044938228,1.24564449799115,5.7787193009051,1.5644487552606,5.86409880703815,0.605399502633369,1.10483290796269,2.21523671208619,3.16882929467913,1.4882300997553,1.46761051855863,3.25753030324836,1.95229960693958,0.48217676009124,4.27519115611873,1.59133341759272,0.547992461293902,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0.526768169550154,0.196709770113833,0,0.616804496998528,0,0,0.473447805734733,0,0.111410456885174,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0.324547393654683,0.696518949197069,0.664789802594326,0,0.571994910780128,0.74291500265913,0,0,0.347140501607594,0,0.419499436209906,0.275118041940067,0,0.258416759169329,0,0,0.402829317109147,0,0.24406205754817,0,0,0.0892997282840798,0,0.112611480483322,1.53316637465883,0,0,1.31780417436063,0,0,0,0,0.132409180813219,0,0.354668382198357,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0.206651562351531,0,0.494533858557114,0,0,0,0,0,0,0,0.45071417671979,0,0,0,0,0,0,0,0,0.337552664482532,0,0,0,0.161646056818812,0,0,0,0.386521706326594,0,0,0.365921118388786,0.132529768321485,0.116193942869518,0.414644220061482,0.252320850875628,0.36497735907583,0,0,0,0,0,0.118306800039844,0,0,0.220587945464788,0,0,0.539325232640658,0.784885860501384,0.38474715694639,0,0,0,0,0,0,0,0,0.614942192715568,0,0.109750285408626,0,0.100528972411631,0,0,1.03993478527958,0,0,0,0,0,0.190254152234598,0.790204397959275,1.71697232418975,0.492434012174795,0,0.297262324577456,0,0,0,0,0,0,0,0.880484340132261,2.07328115540772,0,1.8936365013957,0,0,0,0,0,0.300343057843917,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0.502257091432126,2.10833939483032,0,0,0,0,0,0,0.560425719967636,0.591092280605782,0.431255149719035,0.513372145118994,0,0,0,0,0,0,2.99161459204025,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,0.82707210449155,0.215714200818617,0.74709290462411,0.606255142892519,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0.241718899183244,0.200506470303285,0.0920809889358963,0,0,0.262248829918848,0.451199612907412,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0.831076008928724,0.223874754722178,3.94667777962682,6.79732172664741,0.256450125116389,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0.165284915360978,0.192190067365106,0.255225424989168,0,0,0,0.6970372701606,0,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0.179872457583315,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0.136499911407986,0,0,0,0,0,0,0,0.202910376962704,0,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0.764637207142375,0,0,1.64544909234478,0.648473311192717,0,1.58625035258854,0.106824071127473,0,0,0,0,0.426851060090485,0,0,0.191505370132367,0,0,0,0.228234679033192,0,0,0,0,0,0,0.343505344755765,0,0,0,0,1.39203086947621,0,0,0,1.4098700508785,1.12284324244932,0.879049075631364,0,0.111443384277478,0,1.43246690842614,0.593929361665277,0.614321404198464,0,0,0,0.16480387422676,0,0.19924798825107,0.276283915531148,0.251932747854276,0,0.369254416383208,0,0.269605053441981,0,0,0,2.3948309234694,0,0,0,0,0,0.0874599999961957,2.17499872630438,0,0,0.472775363535873,0,0,0,0,0,0,0.110579259931225,0.886642856860642,0,0.10893846351899,0.557694977114413,0.0769502585037971,0,0,0.448788222048861,0,0.31900115973192,0,0.533034776018635,0,0,0.498635045700469,1.57916962432026,0.392125068635479,1.1747511088309,0.569261198172555,0.158936578980379,0,0.163232808159148,0,0,0.995261931078505,0.442287822516696,5.49927130440263,0.889563386041866,0.123563938946503,0.104421949505455,0.067401132980677,0,0,0.182454789215666,0.391329237864179,0,0.394584402849391,0,0,0,1.65355761355942,0.207376382794494,0,0,0,0,0,0,0,0.0979923974143777,0.34823682632161,0,0,0.483781656445426,0.0730893170861856,0.0821154570532092,0.0969890164884194,0,0,0,0.19871461170299,0.0633107959558787,0.391102765469606,0,0.213452994739353,0,0.144090417154106,0,0.343189995723929,0.14405479798815,0,0,0,0,0.203996435272644,0,0,0,0,0,0.262887354279314,0,0.916641696046735,0,0.998395002494955,1.71690419254628,1.56220020209311,0.873385142327441,0,0,0.157566364614447,0.247247575143499,0,0.688992370603241,0,0,0.272406812223151,0.482259445395058,0.550157746388935,0.415440338029185,0,1.54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| ||
|short_description=p@chr17:1552518..1552538,+ | |||
}} | }} |
Latest revision as of 14:01, 25 July 2015
Short description: | p@chr17:1552518..1552538, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:1552518..1552538, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.90e-50 | 76 |
bone element | 4.60e-46 | 82 |
hematopoietic system | 5.40e-44 | 98 |
blood island | 5.40e-44 | 98 |
skeletal element | 4.02e-41 | 90 |
immune system | 1.74e-39 | 93 |
hemolymphoid system | 5.67e-39 | 108 |
skeletal system | 4.76e-36 | 100 |
lateral plate mesoderm | 2.11e-20 | 203 |
musculoskeletal system | 1.00e-17 | 167 |
mesoderm | 4.72e-10 | 315 |
mesoderm-derived structure | 4.72e-10 | 315 |
presumptive mesoderm | 4.72e-10 | 315 |
connective tissue | 5.02e-10 | 371 |