FFCP PHASE1:Hg19::chr17:30454812..30454825,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:30454812..30454825,+ | |||
|coexpression_cluster_id=C7 | |coexpression_cluster_id=C7 | ||
|description=CAGE_peak_at_chr17:30454812..30454825,+ | |description=CAGE_peak_at_chr17:30454812..30454825,+ | ||
|id=chr17:30454812..30454825,+ | |id=chr17:30454812..30454825,+ | ||
|ontology_enrichment_celltype=CL:0000839!1.22e-31!70;CL:0000557!4.44e-31!71;CL:0002194!7.81e-29!63;CL:0000576!7.81e-29!63;CL:0000040!7.81e-29!63;CL:0000559!7.81e-29!63;CL:0000766!1.74e-28!76;CL:0002009!1.03e-27!65;CL:0000860!1.71e-26!45;CL:0002057!2.48e-26!42;CL:0000763!9.45e-21!112;CL:0000049!9.45e-21!112;CL:0002031!3.33e-19!124;CL:0002087!1.27e-17!119;CL:0000738!3.91e-17!140;CL:0000037!3.95e-15!172;CL:0000566!3.95e-15!172;CL:0002032!3.95e-15!165;CL:0000837!3.95e-15!165;CL:0000988!9.34e-14!182 | |ontology_enrichment_celltype=CL:0000839!1.22e-31!70;CL:0000557!4.44e-31!71;CL:0002194!7.81e-29!63;CL:0000576!7.81e-29!63;CL:0000040!7.81e-29!63;CL:0000559!7.81e-29!63;CL:0000766!1.74e-28!76;CL:0002009!1.03e-27!65;CL:0000860!1.71e-26!45;CL:0002057!2.48e-26!42;CL:0000763!9.45e-21!112;CL:0000049!9.45e-21!112;CL:0002031!3.33e-19!124;CL:0002087!1.27e-17!119;CL:0000738!3.91e-17!140;CL:0000037!3.95e-15!172;CL:0000566!3.95e-15!172;CL:0002032!3.95e-15!165;CL:0000837!3.95e-15!165;CL:0000988!9.34e-14!182 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.59e-41;33!CL:0002057;1.59e-41;33!CL:0000473;2.54e-36;39!CL:0000234;2.54e-36;39!CL:0000576;3.95e-22;48!CL:0000511;1.93e-16;1!CL:0002625;1.93e-16;1!CL:0000216;1.93e-16;1!CL:0000766;3.12e-15;69!CL:0000235;4.84e-11;6!CL:0000763;1.34e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.41e-44,48;CL:0000234,1.41e-44,48;CL:0000860,1.59e-35,42;CL:0002057,1.59e-35,42;CL:0002194,1.70e-35,59;CL:0000576,1.70e-35,59;CL:0000040,1.70e-35,59;CL:0000559,1.70e-35,59;CL:0002009,2.53e-34,61;CL:0000839,1.07e-31,66;CL:0000557,3.23e-31,67;CL:0000766,5.11e-29,72;CL:0000763,4.06e-19,108;CL:0000049,4.06e-19,108;CL:0002087,6.67e-18,115;CL:0002031,4.04e-17,120;CL:0000511,1.21e-16,1;CL:0002625,1.21e-16,1;CL:0000216,1.21e-16,1;CL:0000738,5.36e-15,136;CL:0002032,1.63e-12,161;CL:0000837,1.63e-12,161;CL:0000037,6.00e-12,168;CL:0000988,2.76e-11,177;CL:0000235,6.24e-11,6 | |||
|ontology_enrichment_development_v019=CL:0002057;1.34e-28;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.21e-26!80;UBERON:0001474!3.35e-24!86;UBERON:0002390!5.16e-22!102;UBERON:0003061!5.16e-22!102;UBERON:0004765!2.25e-19!101;UBERON:0001434!2.25e-19!101;UBERON:0002193!2.89e-19!112;UBERON:0002405!3.29e-17!115;UBERON:0002204!5.43e-12!167;UBERON:0003081!1.68e-09!216 | |ontology_enrichment_uberon=UBERON:0002371!1.21e-26!80;UBERON:0001474!3.35e-24!86;UBERON:0002390!5.16e-22!102;UBERON:0003061!5.16e-22!102;UBERON:0004765!2.25e-19!101;UBERON:0001434!2.25e-19!101;UBERON:0002193!2.89e-19!112;UBERON:0002405!3.29e-17!115;UBERON:0002204!5.43e-12!167;UBERON:0003081!1.68e-09!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0001136;1.93e-16;1!UBERON:0001343;1.93e-16;1!UBERON:0004910;1.93e-16;1!UBERON:0004813;1.93e-16;1!UBERON:0004909;6.93e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.83e-27,76;UBERON:0001474,2.07e-25,82;UBERON:0004765,4.29e-23,90;UBERON:0002405,2.51e-22,93;UBERON:0002390,3.78e-21,98;UBERON:0003061,3.78e-21,98;UBERON:0001434,1.04e-20,100;UBERON:0002193,4.06e-19,108;UBERON:0001136,1.21e-16,1;UBERON:0001343,1.21e-16,1;UBERON:0004910,1.21e-16,1;UBERON:0005154,1.21e-16,1;UBERON:0005295,1.21e-16,1;UBERON:0004813,1.21e-16,1;UBERON:0005297,1.21e-16,1;UBERON:0005294,1.21e-16,1;UBERON:0010141,1.21e-16,1;UBERON:0005891,1.21e-16,1;UBERON:0002204,5.02e-12,167;UBERON:0003081,1.45e-11,203;UBERON:0004909,5.49e-09,2;UBERON:0000926,5.11e-07,315;UBERON:0004120,5.11e-07,315;UBERON:0006603,5.11e-07,315 | |||
|phase1_expression=0,0,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0,0,0.152826811495903,0.164201178899891,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0.32389366601898,0,0.145398238779565,0,0,0,0,0.309706370895104,2.3015391385772,1.2808035326455,3.54723344832878,0,0.645484683583826,0,0,0,0.224723484445085,0.306083892370903,0.320929027076094,0,0.989553900560148,1.39624560335142,0.426224750532694,0.870627715885752,0.56738522469114,0.622822248995575,1.25624332628372,3.12889751052121,4.77815458351257,2.42159801053347,1.47311054395026,2.21523671208619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0.289803085735052,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0.176096868026452,0.414656231081544,0.288239906833923,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,1.00451418286425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0.616067160352178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487426979262569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0.0730893170861856,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0.542999601753713,0,0,0,0.082092520749339,0,0,0,0,0,0.13223260174269,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 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|phase1_expression=0,0,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0,0,0.152826811495903,0.164201178899891,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0.32389366601898,0,0.145398238779565,0,0,0,0,0.309706370895104,2.3015391385772,1.2808035326455,3.54723344832878,0,0.645484683583826,0,0,0,0.224723484445085,0.306083892370903,0.320929027076094,0,0.989553900560148,1.39624560335142,0.426224750532694,0.870627715885752,0.56738522469114,0.622822248995575,1.25624332628372,3.12889751052121,4.77815458351257,2.42159801053347,1.47311054395026,2.21523671208619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0.289803085735052,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0.176096868026452,0.414656231081544,0.288239906833923,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,1.00451418286425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0.616067160352178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487426979262569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0.0730893170861856,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0.542999601753713,0,0,0,0.082092520749339,0,0,0,0,0,0.13223260174269,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr17:30454812..30454825,+ | |short_description=p@chr17:30454812..30454825,+ | ||
}} | }} |
Latest revision as of 15:25, 25 July 2015
Short description: | p@chr17:30454812..30454825, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:30454812..30454825, + |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.41e-44 | 48 |
phagocyte | 1.41e-44 | 48 |
classical monocyte | 1.59e-35 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.59e-35 | 42 |
monopoietic cell | 1.70e-35 | 59 |
monocyte | 1.70e-35 | 59 |
monoblast | 1.70e-35 | 59 |
promonocyte | 1.70e-35 | 59 |
macrophage dendritic cell progenitor | 2.53e-34 | 61 |
myeloid lineage restricted progenitor cell | 1.07e-31 | 66 |
granulocyte monocyte progenitor cell | 3.23e-31 | 67 |
myeloid leukocyte | 5.11e-29 | 72 |
myeloid cell | 4.06e-19 | 108 |
common myeloid progenitor | 4.06e-19 | 108 |
nongranular leukocyte | 6.67e-18 | 115 |
hematopoietic lineage restricted progenitor cell | 4.04e-17 | 120 |
androgen binding protein secreting cell | 1.21e-16 | 1 |
seminiferous tubule epithelial cell | 1.21e-16 | 1 |
Sertoli cell | 1.21e-16 | 1 |
leukocyte | 5.36e-15 | 136 |
hematopoietic oligopotent progenitor cell | 1.63e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.63e-12 | 161 |
hematopoietic stem cell | 6.00e-12 | 168 |
hematopoietic cell | 2.76e-11 | 177 |
macrophage | 6.24e-11 | 6 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.83e-27 | 76 |
bone element | 2.07e-25 | 82 |
skeletal element | 4.29e-23 | 90 |
immune system | 2.51e-22 | 93 |
hematopoietic system | 3.78e-21 | 98 |
blood island | 3.78e-21 | 98 |
skeletal system | 1.04e-20 | 100 |
hemolymphoid system | 4.06e-19 | 108 |
mesothelium | 1.21e-16 | 1 |
seminiferous tubule of testis | 1.21e-16 | 1 |
epithelium of male gonad | 1.21e-16 | 1 |
epithelial cord | 1.21e-16 | 1 |
sex cord | 1.21e-16 | 1 |
seminiferous tubule epithelium | 1.21e-16 | 1 |
testis sex cord | 1.21e-16 | 1 |
genital ridge | 1.21e-16 | 1 |
primitive sex cord of indifferent gonad | 1.21e-16 | 1 |
coelomic epithelium | 1.21e-16 | 1 |
musculoskeletal system | 5.02e-12 | 167 |
lateral plate mesoderm | 1.45e-11 | 203 |
epithelium of gonad | 5.49e-09 | 2 |
mesoderm | 5.11e-07 | 315 |
mesoderm-derived structure | 5.11e-07 | 315 |
presumptive mesoderm | 5.11e-07 | 315 |