FFCP PHASE1:Hg19::chr17:34193236..34193241,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:34193236..34193241,- | |||
|description=CAGE_peak_at_chr17:34193236..34193241,- | |description=CAGE_peak_at_chr17:34193236..34193241,- | ||
|id=chr17:34193236..34193241,- | |id=chr17:34193236..34193241,- | ||
|ontology_enrichment_celltype=CL:0002087!1.77e-22!119;CL:0002031!9.94e-20!124;CL:0000738!1.85e-19!140;CL:0000037!6.09e-17!172;CL:0000566!6.09e-17!172;CL:0000988!9.02e-17!182;CL:0002032!9.54e-17!165;CL:0000837!9.54e-17!165;CL:0002057!9.72e-15!42;CL:0000860!1.55e-13!45;CL:0000623!1.15e-12!3;CL:0000825!1.15e-12!3;CL:0000838!1.37e-12!52;CL:0000542!2.76e-12!53;CL:0000051!2.76e-12!53;CL:0000625!8.06e-12!11;CL:0002194!6.19e-10!63;CL:0000576!6.19e-10!63;CL:0000040!6.19e-10!63;CL:0000559!6.19e-10!63;CL:0002009!1.57e-09!65;CL:0000791!1.74e-09!18;CL:0000789!1.74e-09!18;CL:0002420!1.74e-09!18;CL:0002419!1.74e-09!18;CL:0000790!1.74e-09!18;CL:0000766!6.66e-09!76;CL:0000839!1.27e-08!70;CL:0000557!1.86e-08!71;CL:0000084!2.06e-08!25;CL:0000827!2.06e-08!25 | |ontology_enrichment_celltype=CL:0002087!1.77e-22!119;CL:0002031!9.94e-20!124;CL:0000738!1.85e-19!140;CL:0000037!6.09e-17!172;CL:0000566!6.09e-17!172;CL:0000988!9.02e-17!182;CL:0002032!9.54e-17!165;CL:0000837!9.54e-17!165;CL:0002057!9.72e-15!42;CL:0000860!1.55e-13!45;CL:0000623!1.15e-12!3;CL:0000825!1.15e-12!3;CL:0000838!1.37e-12!52;CL:0000542!2.76e-12!53;CL:0000051!2.76e-12!53;CL:0000625!8.06e-12!11;CL:0002194!6.19e-10!63;CL:0000576!6.19e-10!63;CL:0000040!6.19e-10!63;CL:0000559!6.19e-10!63;CL:0002009!1.57e-09!65;CL:0000791!1.74e-09!18;CL:0000789!1.74e-09!18;CL:0002420!1.74e-09!18;CL:0002419!1.74e-09!18;CL:0000790!1.74e-09!18;CL:0000766!6.66e-09!76;CL:0000839!1.27e-08!70;CL:0000557!1.86e-08!71;CL:0000084!2.06e-08!25;CL:0000827!2.06e-08!25 | ||
|ontology_enrichment_celltype_v019=CL:0000623;7.01e-25;3!CL:0002127;8.94e-20;1!CL:0000911;8.94e-20;1!CL:0000814;8.94e-20;1!CL:0000047;2.48e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,3.82e-25,3;CL:0000825,3.82e-25,3;CL:0002127,8.95e-20,1;CL:0000914,8.95e-20,1;CL:0000911,8.95e-20,1;CL:0000814,8.95e-20,1;CL:0002042,8.95e-20,1;CL:0002039,8.95e-20,1;CL:0002040,8.95e-20,1;CL:0002041,8.95e-20,1;CL:0000893,1.43e-10,2;CL:0002489,1.43e-10,2;CL:0000809,1.43e-10,2;CL:0000808,1.43e-10,2;CL:0000894,1.43e-10,2;CL:0000806,1.43e-10,2;CL:0000807,1.43e-10,2;CL:0000805,1.43e-10,2;CL:0002425,1.43e-10,2;CL:0002087,2.58e-07,115;CL:0002031,5.39e-07,120 | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.71e-19;1!CL:0002425;1.43e-10;2!UBERON:0003056;2.63e-07;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.00e-11!102;UBERON:0003061!6.00e-11!102;UBERON:0002193!1.05e-10!112;UBERON:0002405!2.76e-07!115;UBERON:0002371!3.74e-07!80 | |ontology_enrichment_uberon=UBERON:0002390!6.00e-11!102;UBERON:0003061!6.00e-11!102;UBERON:0002193!1.05e-10!112;UBERON:0002405!2.76e-07!115;UBERON:0002371!3.74e-07!80 | ||
|ontology_enrichment_uberon_v019=UBERON:0002134;2.71e-19;1!UBERON:0000941;2.71e-19;1!UBERON:0001785;2.71e-19;1!UBERON:0002464;2.71e-19;1!UBERON:0004904;2.71e-19;1!UBERON:0001021;2.71e-19;1!UBERON:0005208;2.71e-19;1!UBERON:0004145;2.71e-19;1!UBERON:0005946;2.71e-19;1!UBERON:0005965;2.71e-19;1!UBERON:0002078;2.71e-19;1!UBERON:0003714;2.48e-10;2!UBERON:0005162;2.48e-10;2!UBERON:0000122;2.48e-10;2!UBERON:0002081;2.48e-10;2!UBERON:0002133;2.48e-10;2!UBERON:0003978;2.63e-07;3!UBERON:0004151;2.63e-07;3!UBERON:0000946;2.63e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002134,2.25e-19,1;UBERON:0005208,2.25e-19,1;UBERON:0005946,2.25e-19,1;UBERON:0005965,2.25e-19,1;UBERON:0002078,2.25e-19,1;UBERON:0000941,2.71e-19,1;UBERON:0001785,2.71e-19,1;UBERON:0002464,2.71e-19,1;UBERON:0004904,2.71e-19,1;UBERON:0001021,2.71e-19,1;UBERON:0003902,2.71e-19,1;UBERON:0005425,2.71e-19,1;UBERON:0002081,2.27e-10,2;UBERON:0002133,2.27e-10,2;UBERON:0010227,2.27e-10,2;UBERON:0003714,2.49e-10,2;UBERON:0005162,2.49e-10,2;UBERON:0000122,2.49e-10,2;UBERON:0003978,2.47e-07,3;UBERON:0009751,2.47e-07,3;UBERON:0004151,2.47e-07,3;UBERON:0000946,2.47e-07,3;UBERON:0002523,2.47e-07,3;UBERON:0005983,2.47e-07,3;UBERON:0004145,2.47e-07,3;UBERON:0002165,2.47e-07,3;UBERON:0002062,2.47e-07,3;UBERON:0007280,2.47e-07,3 | |||
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| ||
|short_description=p@chr17:34193236..34193241,- | |short_description=p@chr17:34193236..34193241,- | ||
}} | }} |
Latest revision as of 15:42, 25 July 2015
Short description: | p@chr17:34193236..34193241, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:34193236..34193241, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 3.82e-25 | 3 |
pro-NK cell | 3.82e-25 | 3 |
innate effector T cell | 8.95e-20 | 1 |
immature NK T cell | 8.95e-20 | 1 |
effector T cell | 8.95e-20 | 1 |
mature NK T cell | 8.95e-20 | 1 |
immature NK T cell stage IV | 8.95e-20 | 1 |
immature NK T cell stage I | 8.95e-20 | 1 |
immature NK T cell stage II | 8.95e-20 | 1 |
immature NK T cell stage III | 8.95e-20 | 1 |
thymocyte | 1.43e-10 | 2 |
double negative thymocyte | 1.43e-10 | 2 |
double-positive, alpha-beta thymocyte | 1.43e-10 | 2 |
DN4 thymocyte | 1.43e-10 | 2 |
DN1 thymic pro-T cell | 1.43e-10 | 2 |
DN2 thymocyte | 1.43e-10 | 2 |
DN3 thymocyte | 1.43e-10 | 2 |
immature single positive thymocyte | 1.43e-10 | 2 |
early T lineage precursor | 1.43e-10 | 2 |
nongranular leukocyte | 2.58e-07 | 115 |
hematopoietic lineage restricted progenitor cell | 5.39e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
tricuspid valve | 2.25e-19 | 1 |
right atrium valve | 2.25e-19 | 1 |
outflow tract of atrium | 2.25e-19 | 1 |
outflow part of right atrium | 2.25e-19 | 1 |
right cardiac atrium | 2.25e-19 | 1 |
cranial nerve II | 2.71e-19 | 1 |
cranial nerve | 2.71e-19 | 1 |
nerve trunk | 2.71e-19 | 1 |
nerve connecting eye with brain | 2.71e-19 | 1 |
nerve | 2.71e-19 | 1 |
retinal neural layer | 2.71e-19 | 1 |
presumptive neural retina | 2.71e-19 | 1 |
cardiac atrium | 2.27e-10 | 2 |
atrioventricular valve | 2.27e-10 | 2 |
future cardiac atrium | 2.27e-10 | 2 |
neural tissue | 2.49e-10 | 2 |
multi cell component structure | 2.49e-10 | 2 |
neuron projection bundle | 2.49e-10 | 2 |
valve | 2.47e-07 | 3 |
cardiac mesenchyme | 2.47e-07 | 3 |
cardiac chamber | 2.47e-07 | 3 |
cardial valve | 2.47e-07 | 3 |
tunica intima | 2.47e-07 | 3 |
heart layer | 2.47e-07 | 3 |
outflow tract | 2.47e-07 | 3 |
endocardium | 2.47e-07 | 3 |
endocardial cushion | 2.47e-07 | 3 |
presumptive endocardium | 2.47e-07 | 3 |