FFCP PHASE1:Hg19::chr17:48263353..48263364,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:48263353..48263364,+ | |||
|coexpression_cluster_id=C59 | |coexpression_cluster_id=C59 | ||
|description=CAGE_peak_at_chr17:48263353..48263364,+ | |description=CAGE_peak_at_chr17:48263353..48263364,+ | ||
|id=chr17:48263353..48263364,+ | |id=chr17:48263353..48263364,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.14e-31!180;CL:0000057!4.53e-26!75;CL:0000048!9.97e-15!430;CL:0000723!6.51e-14!436;CL:0000034!3.17e-13!444;CL:0000183!8.32e-11!59;CL:0002371!1.63e-10!591;CL:0000680!1.93e-10!57;CL:0000056!1.93e-10!57;CL:0000355!1.93e-10!57;CL:0002334!3.20e-10!12;CL:0000187!4.90e-10!54;CL:0000144!6.00e-10!625;CL:0002320!1.97e-09!365;CL:0000393!1.30e-08!60;CL:0000211!1.30e-08!60;CL:0000499!4.41e-08!27;CL:0002620!4.94e-08!23;CL:0000134!1.18e-07!358;CL:0002569!6.71e-07!6;CL:0000219!7.09e-07!390 | |ontology_enrichment_celltype=CL:0000055!1.14e-31!180;CL:0000057!4.53e-26!75;CL:0000048!9.97e-15!430;CL:0000723!6.51e-14!436;CL:0000034!3.17e-13!444;CL:0000183!8.32e-11!59;CL:0002371!1.63e-10!591;CL:0000680!1.93e-10!57;CL:0000056!1.93e-10!57;CL:0000355!1.93e-10!57;CL:0002334!3.20e-10!12;CL:0000187!4.90e-10!54;CL:0000144!6.00e-10!625;CL:0002320!1.97e-09!365;CL:0000393!1.30e-08!60;CL:0000211!1.30e-08!60;CL:0000499!4.41e-08!27;CL:0002620!4.94e-08!23;CL:0000134!1.18e-07!358;CL:0002569!6.71e-07!6;CL:0000219!7.09e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0002569;6.77e-09;6!CL:0000135;3.96e-08;3!CL:0000388;3.96e-08;3!CL:0000134;6.49e-08;55!CL:0002334;1.33e-07;12!CL:0000499;6.07e-07;28!CL:0000057;6.24e-07;73!CL:0000136;7.67e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,7.37e-19,76;CL:0000048,4.47e-12,427;CL:0000723,1.24e-11,433;CL:0000034,4.62e-11,441;CL:0002320,5.30e-11,361;CL:0000134,8.35e-10,354;CL:0002569,4.55e-09,6;CL:0000219,1.65e-08,386;CL:0000135,3.81e-08,3;CL:0000388,3.81e-08,3;CL:0002334,1.18e-07,12;CL:0000136,2.02e-07,15;CL:0000499,6.06e-07,28 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!7.95e-09!14 | |ontology_enrichment_disease=DOID:2394!7.95e-09!14 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!3.50e-13!83;UBERON:0002329!3.50e-13!83;UBERON:0003077!3.50e-13!83;UBERON:0003059!3.50e-13!83;UBERON:0007282!3.50e-13!83;UBERON:0009618!3.50e-13!83;UBERON:0007285!3.50e-13!83;UBERON:0001134!1.04e-10!61;UBERON:0002036!1.04e-10!61;UBERON:0003082!1.04e-10!61;UBERON:0002385!1.16e-10!63;UBERON:0001015!1.16e-10!63;UBERON:0000383!1.16e-10!63;UBERON:0004290!4.66e-10!70;UBERON:0002384!1.78e-09!375;UBERON:0000486!2.13e-08!82;UBERON:0002200!4.31e-07!11;UBERON:0006876!4.31e-07!11;UBERON:0001013!6.52e-07!14;UBERON:0003422!6.71e-07!6;UBERON:0005256!6.94e-07!143 | |ontology_enrichment_uberon=UBERON:0000914!3.50e-13!83;UBERON:0002329!3.50e-13!83;UBERON:0003077!3.50e-13!83;UBERON:0003059!3.50e-13!83;UBERON:0007282!3.50e-13!83;UBERON:0009618!3.50e-13!83;UBERON:0007285!3.50e-13!83;UBERON:0001134!1.04e-10!61;UBERON:0002036!1.04e-10!61;UBERON:0003082!1.04e-10!61;UBERON:0002385!1.16e-10!63;UBERON:0001015!1.16e-10!63;UBERON:0000383!1.16e-10!63;UBERON:0004290!4.66e-10!70;UBERON:0002384!1.78e-09!375;UBERON:0000486!2.13e-08!82;UBERON:0002200!4.31e-07!11;UBERON:0006876!4.31e-07!11;UBERON:0001013!6.52e-07!14;UBERON:0003422!6.71e-07!6;UBERON:0005256!6.94e-07!143 | ||
|ontology_enrichment_uberon_v019=UBERON:0003104;9.80e-11;7!UBERON:0009142;9.80e-11;7!UBERON:0003422;6.77e-09;6!UBERON:0007846;3.96e-08;3!UBERON:0000043;3.96e-08;3!UBERON:0007845;3.96e-08;3!UBERON:0004457;5.43e-08;9!UBERON:0000042;5.43e-08;9!UBERON:0002384;1.31e-07;198!UBERON:0002331;2.22e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,7.49e-11,371;UBERON:0003422,4.55e-09,6;UBERON:0007846,3.81e-08,3;UBERON:0000043,3.81e-08,3;UBERON:0007845,3.81e-08,3;UBERON:0002331,1.68e-07,10;UBERON:0000358,1.68e-07,10;UBERON:0000307,1.68e-07,10;UBERON:0000091,1.68e-07,10;UBERON:0000087,1.68e-07,10;UBERON:0007010,1.68e-07,10;UBERON:0007806,1.68e-07,10;UBERON:0008780,1.68e-07,10;UBERON:0005728,1.68e-07,10 | |||
|phase1_expression=1.2717486548939,2.35510576280081,1.12763523276777,1.0007329835313,5.81049422755474,4.36169262050184,5.06599756336621,0,0.261185628199839,0,0,0,0.527533956456907,0.123766352960047,0.994192127183747,0,0,0,1.46379839637152,0.61560529038394,1.63200552995402,0.313454721478088,0,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,1.40648818027883,2.1686349143074,0,3.47631645505977,0,0.486634870302636,0.189069634328136,0.221729397462564,0.790513071238134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98183171017191,0.25326102332916,0.264818361626438,6.59724227722272,1.41867352879343,0.560677600142307,1.06748995729705,8.6333641946006,0,0.538842688278752,0.490385709340376,1.05950199351452,0.576175924479999,0,0,0,0.896692083310806,0,0.161872944368132,0,0,0.368502951935304,0.413303124703062,1.18800285728205,2.47266929278557,0,2.15585442544872,0.336672227908132,0.125118519871964,0,0.877955241761676,2.14541457059314,1.95309476578576,0.567160915800105,2.33206526395521,1.2813443329114,1.27159140695737,4.80145753735044,0.412210116953756,5.41045134095821,2.04728541964749,1.68776332241266,0.292311015483596,4.03894038790583,0.460249493211497,0.646584227275248,8.52023022039874,0.302256294682921,0.339121184620975,0,0,0,0,0,0.116193942869518,0,0,0,0,3.85944562915731,0,1.39310378409594,2.88751792667834,0,0,0,0,0,0,0,0,0,0,1.40241773803446,1.2347220339942,5.88034845542168,0,0,0,0,0,0.171567810298526,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336393253036082,0.87192013766656,0.2933531432838,0.775630294546667,0,2.535908257668,1.59562869950922,2.08014873822732,0.257207374262142,0,0.532844358032199,2.43062589218851,3.7983512377401,1.64648067356154,0.325736184293735,1.77695974371273,3.16780749173372,0.301439377059586,0,0.099972991182057,0,0,0,2.63587341040741,9.18895486672911,0,0.434343920002738,0.410952645100767,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,1.50051156317903,0.271265023699736,8.52680532276309,6.78030157429215,5.20417969611984,1.05427273493442,0,0,0,1.32845119707087,0.553107505625109,0.260650843404249,1.37060810223918,3.0882908142977,0,0,0,0.303127571446259,0,3.0239029332968,0.496215615637554,2.14846762603287,8.13914273855913,0.896974044789907,0.511707249066704,6.75586468803151,1.48418066444991,1.54209693802656,2.48586415438378,0.328508624055237,0.519254429183621,2.44041794765914,0,0,0,0.229628896329213,0.728364672026868,1.04899531967539,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0.103041011647722,0.183138929636687,0.165018999841176,0,0,0,0.386682873168488,0.462145851343933,0.460511024178389,0.551346289938122,0.322260734604821,0.290033387828457,0.255679882248303,2.67096106940212,0,0,0,0,2.32422774648643,6.92587163027408,0,0,0,0,0,0,0.744316738719335,0.316379424718726,2.85945290885737,0.511795582622668,0,0,0.78494864019923,0.539617372749944,2.19629623788844,0.706874414074119,0,0,0,0.48763373908959,0.974853958525138,0,1.22849920267187,3.53513579884282,1.13008116620243,0.551365343546124,1.32687795048244,0.438450885253763,1.73632660280006,0.655894752046633,0,0.30982349809975,0,0.573645408816206,2.55447506634115,0,0,3.58882980006029,3.62224382255892,0.75894634753143,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0,0,0,0.19924798825107,0,0,0,0,0.933118762985422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,1.20990716048664,0,0.126373159256976,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0.17472666824203,0,0,0,0,0,0.0882561266915003,1.12990370390266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577901179803038,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0.0671834724867263,1.80149941771202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0.25426853765475,0,0.864221491201268,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23882204330311,4.44055288709727,0.554805861502613,0.189403005275089,0.251567901752575,0,0,1.05861646634267,1.08806040407946,0,0.318593534327405,0.449803112163605,0.621051827505038,0.829412415681711,1.32920857278997,3.1304703708704,3.45592500693602,0.761610424337591,0.406870733204662,0.727394636810238,1.07410557042488,0.464033759878494,2.78667122089031,0,3.09056134664514,0.673498977531838,0,0,0.214441591374926,0,0,0.463044948647668,0.244736704506468,0.358177682162975,0,0.219284049578707,0,0.38582807654183,0,0,0,0,0,0,0,0,1.96565909307848,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,1.59002175326709,0,0,3.17408349321616,0.6124909547064,0,0,0,0,0,0,0,0,0,0,0,0,5.33934933654034,0,0,0.0752103283492573,0.8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| ||
|short_description=p@chr17:48263353..48263364,+ | |short_description=p@chr17:48263353..48263364,+ | ||
}} | }} |
Latest revision as of 18:31, 25 July 2015
Short description: | p@chr17:48263353..48263364, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:48263353..48263364, + |
Coexpression cluster: | C59_Smooth_Fibroblast_Mesenchymal_tenocyte_Ewing_skin_hepatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 7.37e-19 | 76 |
multi fate stem cell | 4.47e-12 | 427 |
somatic stem cell | 1.24e-11 | 433 |
stem cell | 4.62e-11 | 441 |
connective tissue cell | 5.30e-11 | 361 |
mesenchymal cell | 8.35e-10 | 354 |
mesenchymal stem cell of umbilical cord | 4.55e-09 | 6 |
motile cell | 1.65e-08 | 386 |
fibrocyte | 3.81e-08 | 3 |
tendon cell | 3.81e-08 | 3 |
preadipocyte | 1.18e-07 | 12 |
fat cell | 2.02e-07 | 15 |
stromal cell | 6.06e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 7.49e-11 | 371 |
mesenchyme of umbilical cord | 4.55e-09 | 6 |
dense regular connective tissue | 3.81e-08 | 3 |
tendon | 3.81e-08 | 3 |
regular connective tissue | 3.81e-08 | 3 |
umbilical cord | 1.68e-07 | 10 |
blastocyst | 1.68e-07 | 10 |
blastula | 1.68e-07 | 10 |
bilaminar disc | 1.68e-07 | 10 |
inner cell mass | 1.68e-07 | 10 |
cleaving embryo | 1.68e-07 | 10 |
connecting stalk | 1.68e-07 | 10 |
inner cell mass derived epiblast | 1.68e-07 | 10 |
extraembryonic mesoderm | 1.68e-07 | 10 |