FFCP PHASE1:Hg19::chr17:48970912..48970934,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:48970912..48970934,- | |||
|description=CAGE_peak_at_chr17:48970912..48970934,- | |description=CAGE_peak_at_chr17:48970912..48970934,- | ||
|id=chr17:48970912..48970934,- | |id=chr17:48970912..48970934,- | ||
|ontology_enrichment_celltype=CL:0002621!2.68e-08!3 | |ontology_enrichment_celltype=CL:0002621!2.68e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0002567;1.26e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,1.21e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0004874;3.67e-23;1!UBERON:0010122;1.65e-12;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3493;1.65e-12;2!DOID:4929;2.74e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,1.65e-12,2;DOID:4929,3.62e-12,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.79e-16!115;UBERON:0000369!3.88e-11!4;UBERON:0002435!3.88e-11!4;UBERON:0000204!3.88e-11!4;UBERON:0010082!3.88e-11!4;UBERON:0005383!6.90e-09!3;UBERON:0005382!6.90e-09!3;UBERON:0001896!8.47e-09!3;UBERON:0005290!8.47e-09!3;UBERON:0010096!8.47e-09!3;UBERON:0001949!2.68e-08!3;UBERON:0002298!5.77e-08!8;UBERON:0000153!2.80e-07!129;UBERON:0007811!2.80e-07!129;UBERON:0002308!5.29e-07!9;UBERON:0000125!5.29e-07!9;UBERON:0000062!6.13e-07!511;UBERON:0004121!6.18e-07!169 | |ontology_enrichment_uberon=UBERON:0007023!2.79e-16!115;UBERON:0000369!3.88e-11!4;UBERON:0002435!3.88e-11!4;UBERON:0000204!3.88e-11!4;UBERON:0010082!3.88e-11!4;UBERON:0005383!6.90e-09!3;UBERON:0005382!6.90e-09!3;UBERON:0001896!8.47e-09!3;UBERON:0005290!8.47e-09!3;UBERON:0010096!8.47e-09!3;UBERON:0001949!2.68e-08!3;UBERON:0002298!5.77e-08!8;UBERON:0000153!2.80e-07!129;UBERON:0007811!2.80e-07!129;UBERON:0002308!5.29e-07!9;UBERON:0000125!5.29e-07!9;UBERON:0000062!6.13e-07!511;UBERON:0004121!6.18e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0002114;4.83e-30;2!UBERON:0000989;3.67e-23;1!UBERON:0004913;3.67e-23;1!UBERON:0008811;3.67e-23;1!UBERON:0003703;3.67e-23;1!UBERON:0001174;3.67e-23;1!UBERON:0004914;3.67e-23;1!UBERON:0002108;1.77e-18;4!UBERON:0001873;1.65e-12;2!UBERON:0003127;2.74e-12;2!UBERON:0001896;8.96e-09;3!UBERON:0005383;8.96e-09;3!UBERON:0005290;8.96e-09;3!UBERON:0005382;8.96e-09;3!UBERON:0000369;6.87e-07;4!UBERON:0002435;6.87e-07;4!UBERON:0000204;6.87e-07;4!UBERON:0002394;8.85e-07;4!UBERON:0003928;8.85e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002114,8.74e-30,2;UBERON:0000989,2.10e-23,1;UBERON:0008811,2.10e-23,1;UBERON:0006258,2.10e-23,1;UBERON:0005876,2.10e-23,1;UBERON:0004874,2.10e-23,1;UBERON:0004913,6.40e-23,1;UBERON:0003703,6.40e-23,1;UBERON:0001174,6.40e-23,1;UBERON:0004914,6.40e-23,1;UBERON:0002108,2.52e-18,4;UBERON:0001873,1.48e-12,2;UBERON:0010122,1.48e-12,2;UBERON:0003127,2.32e-12,2;UBERON:0005383,8.31e-09,3;UBERON:0005382,8.31e-09,3;UBERON:0001896,9.66e-09,3;UBERON:0005290,9.66e-09,3;UBERON:0010096,9.66e-09,3;UBERON:0000369,6.50e-07,4;UBERON:0002435,6.50e-07,4;UBERON:0000204,6.50e-07,4;UBERON:0010082,6.50e-07,4 | |||
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| ||
|short_description=p@chr17:48970912..48970934,- | |short_description=p@chr17:48970912..48970934,- | ||
}} | }} |
Latest revision as of 18:50, 25 July 2015
Short description: | p@chr17:48970912..48970934, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:48970912..48970934, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 1.21e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
duodenum | 8.74e-30 | 2 |
penis | 2.10e-23 | 1 |
intromittent organ | 2.10e-23 | 1 |
lateral plate mesenchyme | 2.10e-23 | 1 |
undifferentiated genital tubercle | 2.10e-23 | 1 |
somatopleure | 2.10e-23 | 1 |
hepatopancreatic ampulla | 6.40e-23 | 1 |
extrahepatic bile duct | 6.40e-23 | 1 |
common bile duct | 6.40e-23 | 1 |
duodenal papilla | 6.40e-23 | 1 |
small intestine | 2.52e-18 | 4 |
caudate nucleus | 1.48e-12 | 2 |
future caudate nucleus | 1.48e-12 | 2 |
open tracheal system trachea | 2.32e-12 | 2 |
caudate-putamen | 8.31e-09 | 3 |
dorsal striatum | 8.31e-09 | 3 |
medulla oblongata | 9.66e-09 | 3 |
myelencephalon | 9.66e-09 | 3 |
future myelencephalon | 9.66e-09 | 3 |
corpus striatum | 6.50e-07 | 4 |
striatum | 6.50e-07 | 4 |
ventral part of telencephalon | 6.50e-07 | 4 |
future corpus striatum | 6.50e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 1.65e-12 | 2 |
tubular adenocarcinoma | 3.62e-12 | 2 |