FFCP PHASE1:Hg19::chr17:63491472..63491521,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:63491472..63491521,+ | |||
|coexpression_cluster_id=C28 | |coexpression_cluster_id=C28 | ||
|description=CAGE_peak_at_chr17:63491472..63491521,+ | |description=CAGE_peak_at_chr17:63491472..63491521,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000946!2.64e-08!1;CL:0000786!2.64e-08!1;CL:0000980!2.64e-08!1 | |ontology_enrichment_celltype=CL:0000946!2.64e-08!1;CL:0000786!2.64e-08!1;CL:0000980!2.64e-08!1 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:0050619!1.10e-08!1;DOID:1357!1.10e-08!1 | |ontology_enrichment_disease=DOID:0050619!1.10e-08!1;DOID:1357!1.10e-08!1 | ||
|ontology_enrichment_disease_v019=DOID:5409;1.03e-17;4!DOID:1325;9.89e-11;7!DOID:3904;9.89e-11;7!DOID:3905;1.21e-08;9 | |ontology_enrichment_disease_v019=DOID:5409;1.03e-17;4!DOID:1325;9.89e-11;7!DOID:3904;9.89e-11;7!DOID:3905;1.21e-08;9 | ||
|ontology_enrichment_disease_v019_2=DOID:5409,1.03e-17,4;DOID:1325,9.89e-11,7;DOID:3904,9.89e-11,7;DOID:3905,1.21e-08,9 | |||
|ontology_enrichment_uberon=UBERON:0002771!2.27e-10!3;UBERON:0007023!2.12e-09!115;UBERON:0001764!1.10e-08!1;UBERON:0001825!1.10e-08!1;UBERON:0001871!1.61e-08!7;UBERON:0002370!1.71e-08!4;UBERON:0005058!1.71e-08!4;UBERON:0009113!1.71e-08!4;UBERON:0003295!1.71e-08!4;UBERON:0005562!1.71e-08!4;UBERON:0001049!1.79e-08!57;UBERON:0005068!1.79e-08!57;UBERON:0006241!1.79e-08!57;UBERON:0007135!1.79e-08!57;UBERON:0001052!2.85e-08!4;UBERON:0001950!2.90e-08!20;UBERON:0002336!3.79e-08!1;UBERON:0001018!3.79e-08!1;UBERON:0002473!3.79e-08!1;UBERON:0005340!3.79e-08!1;UBERON:0002316!3.79e-08!1;UBERON:0003544!3.79e-08!1;UBERON:0001020!3.79e-08!1;UBERON:0005970!3.79e-08!1;UBERON:0002437!3.79e-08!1;UBERON:0002022!4.07e-08!1;UBERON:0000153!4.87e-08!129;UBERON:0007811!4.87e-08!129;UBERON:0005743!8.92e-08!86;UBERON:0002619!1.58e-07!22;UBERON:0000974!2.80e-07!10;UBERON:0002791!5.91e-07!33;UBERON:0000073!6.96e-07!94;UBERON:0001016!6.96e-07!94;UBERON:0004907!8.90e-07!5;UBERON:0001893!9.66e-07!34;UBERON:0001017!9.73e-07!82 | |ontology_enrichment_uberon=UBERON:0002771!2.27e-10!3;UBERON:0007023!2.12e-09!115;UBERON:0001764!1.10e-08!1;UBERON:0001825!1.10e-08!1;UBERON:0001871!1.61e-08!7;UBERON:0002370!1.71e-08!4;UBERON:0005058!1.71e-08!4;UBERON:0009113!1.71e-08!4;UBERON:0003295!1.71e-08!4;UBERON:0005562!1.71e-08!4;UBERON:0001049!1.79e-08!57;UBERON:0005068!1.79e-08!57;UBERON:0006241!1.79e-08!57;UBERON:0007135!1.79e-08!57;UBERON:0001052!2.85e-08!4;UBERON:0001950!2.90e-08!20;UBERON:0002336!3.79e-08!1;UBERON:0001018!3.79e-08!1;UBERON:0002473!3.79e-08!1;UBERON:0005340!3.79e-08!1;UBERON:0002316!3.79e-08!1;UBERON:0003544!3.79e-08!1;UBERON:0001020!3.79e-08!1;UBERON:0005970!3.79e-08!1;UBERON:0002437!3.79e-08!1;UBERON:0002022!4.07e-08!1;UBERON:0000153!4.87e-08!129;UBERON:0007811!4.87e-08!129;UBERON:0005743!8.92e-08!86;UBERON:0002619!1.58e-07!22;UBERON:0000974!2.80e-07!10;UBERON:0002791!5.91e-07!33;UBERON:0000073!6.96e-07!94;UBERON:0001016!6.96e-07!94;UBERON:0004907!8.90e-07!5;UBERON:0001893!9.66e-07!34;UBERON:0001017!9.73e-07!82 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;3.61e-34;2!UBERON:0005058;3.61e-34;2!UBERON:0009113;3.61e-34;2!UBERON:0004177;1.40e-14;5!UBERON:0005057;1.40e-14;5 | |ontology_enrichment_uberon_v019=UBERON:0002370;3.61e-34;2!UBERON:0005058;3.61e-34;2!UBERON:0009113;3.61e-34;2!UBERON:0004177;1.40e-14;5!UBERON:0005057;1.40e-14;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,7.35e-18,4;UBERON:0005058,7.35e-18,4;UBERON:0009113,7.35e-18,4;UBERON:0003295,7.35e-18,4;UBERON:0005562,7.35e-18,4;UBERON:0003351,2.19e-12,6;UBERON:0004177,8.16e-11,7;UBERON:0005057,8.16e-11,7;UBERON:0004807,1.47e-10,28;UBERON:0000974,5.73e-08,10;UBERON:0003408,5.73e-08,10;UBERON:0001042,5.73e-08,10;UBERON:0009145,5.73e-08,10;UBERON:0006562,2.32e-07,11;UBERON:0009722,2.32e-07,11;UBERON:0007690,2.32e-07,11;UBERON:0000072,1.00e-06,47 | |||
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|short_description=p@chr17:63491472..63491521,+ | |short_description=p@chr17:63491472..63491521,+ | ||
}} | }} |
Latest revision as of 19:59, 25 July 2015
Short description: | p@chr17:63491472..63491521, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:63491472..63491521, + |
Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 7.35e-18 | 4 |
hemolymphoid system gland | 7.35e-18 | 4 |
thymic region | 7.35e-18 | 4 |
pharyngeal gland | 7.35e-18 | 4 |
thymus primordium | 7.35e-18 | 4 |
pharyngeal epithelium | 2.19e-12 | 6 |
hemopoietic organ | 8.16e-11 | 7 |
immune organ | 8.16e-11 | 7 |
respiratory system epithelium | 1.47e-10 | 28 |
neck | 5.73e-08 | 10 |
gland of gut | 5.73e-08 | 10 |
chordate pharynx | 5.73e-08 | 10 |
pharyngeal region of foregut | 5.73e-08 | 10 |
pharynx | 2.32e-07 | 11 |
entire pharyngeal arch endoderm | 2.32e-07 | 11 |
early pharyngeal endoderm | 2.32e-07 | 11 |
segment of respiratory tract | 1.00e-06 | 47 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 1.03e-17 | 4 |
bronchus cancer | 9.89e-11 | 7 |
bronchogenic carcinoma | 9.89e-11 | 7 |
lung carcinoma | 1.21e-08 | 9 |