FFCP PHASE1:Hg19::chr18:20494078..20494108,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:20494078..20494108,+ | |||
|coexpression_cluster_id=C1796 | |||
|description=CAGE_peak_at_chr18:20494078..20494108,+ | |description=CAGE_peak_at_chr18:20494078..20494108,+ | ||
|id=chr18:20494078..20494108,+ | |id=chr18:20494078..20494108,+ | ||
|ontology_enrichment_celltype=CL:0002076!7.05e-28!43;CL:0000066!1.26e-20!254;CL:0000223!7.50e-20!59;CL:0002368!1.69e-13!13;CL:0002251!4.82e-13!21;CL:0002159!2.37e-10!13;CL:0002202!2.66e-08!9;CL:0002632!2.66e-08!9;CL:0000622!3.71e-07!5;CL:0002077!9.74e-07!33 | |ontology_enrichment_celltype=CL:0002076!7.05e-28!43;CL:0000066!1.26e-20!254;CL:0000223!7.50e-20!59;CL:0002368!1.69e-13!13;CL:0002251!4.82e-13!21;CL:0002159!2.37e-10!13;CL:0002202!2.66e-08!9;CL:0002632!2.66e-08!9;CL:0000622!3.71e-07!5;CL:0002077!9.74e-07!33 | ||
|ontology_enrichment_celltype_v019=CL:0002076;3.15e-21;42!CL:0002368;6.62e-15;13!CL:0002251;1.08e-12;20!CL:0002159;3.29e-12;14!CL:0000622;8.14e-09;5!CL:0002202;2.06e-08;9!CL:0002632;2.06e-08;9!CL:0000244;2.84e-07;4!CL:0000731;2.84e-07;4!CL:0000154;2.95e-07;6!CL:0002166;4.18e-07;3!CL:0002621;8.32e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.03e-26,42;CL:0000223,7.79e-20,58;CL:0000066,3.94e-16,253;CL:0002368,6.33e-15,13;CL:0002251,1.11e-12,20;CL:0002159,3.16e-12,14;CL:0000622,7.88e-09,5;CL:0002202,2.01e-08,9;CL:0002632,2.01e-08,9;CL:0000154,2.88e-07,6;CL:0000244,3.10e-07,4;CL:0000731,3.10e-07,4;CL:0002166,4.19e-07,3;CL:0002621,8.26e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000223;1.57e-10;58 | |||
|ontology_enrichment_disease=DOID:1749!1.04e-13!14;DOID:305!1.74e-07!106 | |ontology_enrichment_disease=DOID:1749!1.04e-13!14;DOID:305!1.74e-07!106 | ||
|ontology_enrichment_disease_v019=DOID:1749;2.73e-13;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,4.10e-13,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.33e-23!169;UBERON:0000925!3.33e-23!169;UBERON:0006595!3.33e-23!169;UBERON:0001004!9.15e-18!72;UBERON:0001007!1.14e-16!155;UBERON:0001555!1.14e-16!155;UBERON:0007026!1.14e-16!155;UBERON:0000161!9.93e-14!35;UBERON:0004921!1.16e-12!129;UBERON:0004185!1.16e-12!129;UBERON:0000464!1.54e-12!104;UBERON:0000166!2.17e-12!21;UBERON:0000077!3.01e-11!130;UBERON:0000065!2.53e-10!53;UBERON:0000466!5.56e-10!126;UBERON:0005911!1.10e-09!82;UBERON:0000165!1.46e-09!28;UBERON:0000930!1.46e-09!28;UBERON:0005178!1.18e-08!34;UBERON:0002224!1.18e-08!34;UBERON:0005153!1.44e-08!37;UBERON:0005181!2.94e-08!35;UBERON:0001041!3.56e-08!98;UBERON:0000062!1.45e-07!511;UBERON:0007196!1.64e-07!14;UBERON:0001558!1.64e-07!14;UBERON:0000974!2.19e-07!10;UBERON:0000365!2.93e-07!5;UBERON:0001044!3.80e-07!6;UBERON:0003293!3.80e-07!6;UBERON:0003294!3.80e-07!6;UBERON:0010047!3.80e-07!6;UBERON:0000167!3.80e-07!6;UBERON:0006554!3.99e-07!44;UBERON:0003408!4.53e-07!10;UBERON:0003729!5.27e-07!5;UBERON:0001008!7.57e-07!45;UBERON:0005156!9.45e-07!59;UBERON:0000990!9.45e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0000161;3.21e-12;19!UBERON:0000166;3.21e-12;19!UBERON:0000165;1.36e-11;28!UBERON:0000365;5.32e-09;5!UBERON:0001044;7.05e-09;6!UBERON:0003293;7.05e-09;6!UBERON:0003294;7.05e-09;6!UBERON:0010047;7.05e-09;6!UBERON:0003408;7.05e-09;6!UBERON:0000167;7.05e-09;6!UBERON:0000486;8.06e-09;12!UBERON:0001041;5.42e-08;14!UBERON:0007196;1.95e-07;15!UBERON:0001558;1.95e-07;15!UBERON:0005910;2.09e-07;6!UBERON:0001004;3.26e-07;65!UBERON:0000974;5.48e-07;6!UBERON:0001949;8.32e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.09e-18,160;UBERON:0000925,2.09e-18,160;UBERON:0006595,2.09e-18,160;UBERON:0001004,2.27e-18,74;UBERON:0000161,9.40e-14,36;UBERON:0000166,1.44e-13,22;UBERON:0001007,5.53e-13,145;UBERON:0001555,5.53e-13,145;UBERON:0007026,5.53e-13,145;UBERON:0000153,1.13e-11,62;UBERON:0007811,1.13e-11,62;UBERON:0000165,5.25e-11,29;UBERON:0000930,5.25e-11,29;UBERON:0003102,2.36e-10,99;UBERON:0000065,1.88e-09,54;UBERON:0000033,3.41e-09,56;UBERON:0000365,5.81e-09,5;UBERON:0003408,5.82e-09,10;UBERON:0001044,8.11e-09,6;UBERON:0003293,8.11e-09,6;UBERON:0003294,8.11e-09,6;UBERON:0010047,8.11e-09,6;UBERON:0000167,8.11e-09,6;UBERON:0004921,8.61e-09,118;UBERON:0005178,1.36e-07,34;UBERON:0002224,1.36e-07,34;UBERON:0000974,1.57e-07,10;UBERON:0007196,1.78e-07,15;UBERON:0001558,1.78e-07,15;UBERON:0005910,2.25e-07,6;UBERON:0005181,2.84e-07,35;UBERON:0002530,2.94e-07,59;UBERON:0001041,3.28e-07,87;UBERON:0005911,4.00e-07,82;UBERON:0001949,8.26e-07,3 | |||
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| ||
|short_description=p@chr18:20494078..20494108,+ | |short_description=p@chr18:20494078..20494108,+ | ||
}} | }} |
Latest revision as of 23:55, 25 July 2015
Short description: | p@chr18:20494078..20494108, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:20494078..20494108, + |
Coexpression cluster: | C1796_Keratinocyte_Small_Mallassezderived_cervical_Mammary_oral_malignant |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.03e-26 | 42 |
endodermal cell | 7.79e-20 | 58 |
epithelial cell | 3.94e-16 | 253 |
respiratory epithelial cell | 6.33e-15 | 13 |
epithelial cell of alimentary canal | 1.11e-12 | 20 |
general ecto-epithelial cell | 3.16e-12 | 14 |
acinar cell | 7.88e-09 | 5 |
epithelial cell of tracheobronchial tree | 2.01e-08 | 9 |
epithelial cell of lower respiratory tract | 2.01e-08 | 9 |
protein secreting cell | 2.88e-07 | 6 |
transitional epithelial cell | 3.10e-07 | 4 |
urothelial cell | 3.10e-07 | 4 |
epithelial cell of Malassez | 4.19e-07 | 3 |
gingival epithelial cell | 8.26e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 2.09e-18 | 160 |
endoderm | 2.09e-18 | 160 |
presumptive endoderm | 2.09e-18 | 160 |
respiratory system | 2.27e-18 | 74 |
orifice | 9.40e-14 | 36 |
oral opening | 1.44e-13 | 22 |
digestive system | 5.53e-13 | 145 |
digestive tract | 5.53e-13 | 145 |
primitive gut | 5.53e-13 | 145 |
anterior region of body | 1.13e-11 | 62 |
craniocervical region | 1.13e-11 | 62 |
mouth | 5.25e-11 | 29 |
stomodeum | 5.25e-11 | 29 |
surface structure | 2.36e-10 | 99 |
respiratory tract | 1.88e-09 | 54 |
head | 3.41e-09 | 56 |
urothelium | 5.81e-09 | 5 |
gland of gut | 5.82e-09 | 10 |
saliva-secreting gland | 8.11e-09 | 6 |
gland of oral region | 8.11e-09 | 6 |
gland of foregut | 8.11e-09 | 6 |
oral gland | 8.11e-09 | 6 |
oral cavity | 8.11e-09 | 6 |
subdivision of digestive tract | 8.61e-09 | 118 |
thoracic cavity element | 1.36e-07 | 34 |
thoracic cavity | 1.36e-07 | 34 |
neck | 1.57e-07 | 10 |
tracheobronchial tree | 1.78e-07 | 15 |
lower respiratory tract | 1.78e-07 | 15 |
transitional epithelium | 2.25e-07 | 6 |
thoracic segment organ | 2.84e-07 | 35 |
gland | 2.94e-07 | 59 |
foregut | 3.28e-07 | 87 |
endo-epithelium | 4.00e-07 | 82 |
gingival epithelium | 8.26e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 4.10e-13 | 14 |