FFCP PHASE1:Hg19::chr18:20494078..20494108,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr18:20494078..20494108,+ | |||
|coexpression_cluster_id=C1796 | |||
|description=CAGE_peak_at_chr18:20494078..20494108,+ | |||
|id=chr18:20494078..20494108,+ | |||
|ontology_enrichment_celltype=CL:0002076!7.05e-28!43;CL:0000066!1.26e-20!254;CL:0000223!7.50e-20!59;CL:0002368!1.69e-13!13;CL:0002251!4.82e-13!21;CL:0002159!2.37e-10!13;CL:0002202!2.66e-08!9;CL:0002632!2.66e-08!9;CL:0000622!3.71e-07!5;CL:0002077!9.74e-07!33 | |||
|ontology_enrichment_celltype_v019=CL:0002076;3.15e-21;42!CL:0002368;6.62e-15;13!CL:0002251;1.08e-12;20!CL:0002159;3.29e-12;14!CL:0000622;8.14e-09;5!CL:0002202;2.06e-08;9!CL:0002632;2.06e-08;9!CL:0000244;2.84e-07;4!CL:0000731;2.84e-07;4!CL:0000154;2.95e-07;6!CL:0002166;4.18e-07;3!CL:0002621;8.32e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.03e-26,42;CL:0000223,7.79e-20,58;CL:0000066,3.94e-16,253;CL:0002368,6.33e-15,13;CL:0002251,1.11e-12,20;CL:0002159,3.16e-12,14;CL:0000622,7.88e-09,5;CL:0002202,2.01e-08,9;CL:0002632,2.01e-08,9;CL:0000154,2.88e-07,6;CL:0000244,3.10e-07,4;CL:0000731,3.10e-07,4;CL:0002166,4.19e-07,3;CL:0002621,8.26e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000223;1.57e-10;58 | |||
|ontology_enrichment_disease=DOID:1749!1.04e-13!14;DOID:305!1.74e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:1749;2.73e-13;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,4.10e-13,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.33e-23!169;UBERON:0000925!3.33e-23!169;UBERON:0006595!3.33e-23!169;UBERON:0001004!9.15e-18!72;UBERON:0001007!1.14e-16!155;UBERON:0001555!1.14e-16!155;UBERON:0007026!1.14e-16!155;UBERON:0000161!9.93e-14!35;UBERON:0004921!1.16e-12!129;UBERON:0004185!1.16e-12!129;UBERON:0000464!1.54e-12!104;UBERON:0000166!2.17e-12!21;UBERON:0000077!3.01e-11!130;UBERON:0000065!2.53e-10!53;UBERON:0000466!5.56e-10!126;UBERON:0005911!1.10e-09!82;UBERON:0000165!1.46e-09!28;UBERON:0000930!1.46e-09!28;UBERON:0005178!1.18e-08!34;UBERON:0002224!1.18e-08!34;UBERON:0005153!1.44e-08!37;UBERON:0005181!2.94e-08!35;UBERON:0001041!3.56e-08!98;UBERON:0000062!1.45e-07!511;UBERON:0007196!1.64e-07!14;UBERON:0001558!1.64e-07!14;UBERON:0000974!2.19e-07!10;UBERON:0000365!2.93e-07!5;UBERON:0001044!3.80e-07!6;UBERON:0003293!3.80e-07!6;UBERON:0003294!3.80e-07!6;UBERON:0010047!3.80e-07!6;UBERON:0000167!3.80e-07!6;UBERON:0006554!3.99e-07!44;UBERON:0003408!4.53e-07!10;UBERON:0003729!5.27e-07!5;UBERON:0001008!7.57e-07!45;UBERON:0005156!9.45e-07!59;UBERON:0000990!9.45e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0000161;3.21e-12;19!UBERON:0000166;3.21e-12;19!UBERON:0000165;1.36e-11;28!UBERON:0000365;5.32e-09;5!UBERON:0001044;7.05e-09;6!UBERON:0003293;7.05e-09;6!UBERON:0003294;7.05e-09;6!UBERON:0010047;7.05e-09;6!UBERON:0003408;7.05e-09;6!UBERON:0000167;7.05e-09;6!UBERON:0000486;8.06e-09;12!UBERON:0001041;5.42e-08;14!UBERON:0007196;1.95e-07;15!UBERON:0001558;1.95e-07;15!UBERON:0005910;2.09e-07;6!UBERON:0001004;3.26e-07;65!UBERON:0000974;5.48e-07;6!UBERON:0001949;8.32e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.09e-18,160;UBERON:0000925,2.09e-18,160;UBERON:0006595,2.09e-18,160;UBERON:0001004,2.27e-18,74;UBERON:0000161,9.40e-14,36;UBERON:0000166,1.44e-13,22;UBERON:0001007,5.53e-13,145;UBERON:0001555,5.53e-13,145;UBERON:0007026,5.53e-13,145;UBERON:0000153,1.13e-11,62;UBERON:0007811,1.13e-11,62;UBERON:0000165,5.25e-11,29;UBERON:0000930,5.25e-11,29;UBERON:0003102,2.36e-10,99;UBERON:0000065,1.88e-09,54;UBERON:0000033,3.41e-09,56;UBERON:0000365,5.81e-09,5;UBERON:0003408,5.82e-09,10;UBERON:0001044,8.11e-09,6;UBERON:0003293,8.11e-09,6;UBERON:0003294,8.11e-09,6;UBERON:0010047,8.11e-09,6;UBERON:0000167,8.11e-09,6;UBERON:0004921,8.61e-09,118;UBERON:0005178,1.36e-07,34;UBERON:0002224,1.36e-07,34;UBERON:0000974,1.57e-07,10;UBERON:0007196,1.78e-07,15;UBERON:0001558,1.78e-07,15;UBERON:0005910,2.25e-07,6;UBERON:0005181,2.84e-07,35;UBERON:0002530,2.94e-07,59;UBERON:0001041,3.28e-07,87;UBERON:0005911,4.00e-07,82;UBERON:0001949,8.26e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,14.7107395916628,1.50602959389125,5.17655614233503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,1.17881167947941,6.19301990097322,8.52804218404188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.28578699070815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.6204333720435,22.3651818884484,28.6804595389004,0.243947412259191,0.132529768321485,0.116193942869518,0.725627385107593,1.00928340350251,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0,93.507243168149,4.49607013030478,7.94178882051884,52.5902368500448,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,56.2403003920662,68.200744048737,62.8063680783772,52.8395283946805,55.2204483176528,4.21720947081732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66435439510497,0.30239029332968,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0.241718899183244,34.2866064218617,10.1289087829486,0,0,0,1.35359883872224,1.77135275340154,0,0,0.316654886678627,0,0,0,0,0,0,0.764628819135115,0,0.223874754722178,0,0,0,0,0,1.33953315142039,0,0,10.3367796839311,14.3013254128035,0,0,0,0,0,0,0,0,0,82.973027511211,34.7864021930842,78.2265927591801,11.8354603600993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.8182053597289,3.35151137767894,2.17781969722645,1.12972560932135,3.01353760869861,3.36942951335251,3.54744122829341,23.8912336215238,0,0,0,0,0,0,0,0,0,0,6.12600539952579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30998378285754,0,0,0,0,2.14870036263921,0.296964680832639,0.307160702099232,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0.629078458031288,3.9384658428634,0,2.07151151837561,0,0,0,0,0,1.30213880542617,0,1.44999915086959,2.04828206913899,2.54253650292766,0.472775363535873,0,0,0,0,0,0,0,0,0,0,67.8993634636798,3.69361240818226,0,0,1.52587995496613,0,1.27600463892768,1.09917112082235,2.13213910407454,0,0,0,0,0,0,0,0,0,5.06021705293358,0,0,0.995261931078505,1.23840590304675,1.22206028986725,0,0,0,0.067401132980677,0,0,0,6.06560318689478,0,11.0483632797829,6.04953580243319,0,0,0.150323419414493,0,0,0,0,0,9.10750547295337,0,0.347119476670262,10.5831789207528,10.4471047896483,9.08578674858557,0,0,0,0,7.66213230258513,0,0.677942222341597,0,0,0,0.195551382734803,1.36269994427607,3.20179492109029,0,8.21315377778404,0,0,0,0,13.4345599731573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5476039091159,0,6.37325906438606,15.918752874438,1.94081976099493,0,0,3.07064315711112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.44615804095243,3.93010762749165,4.14239055347196,0,0,0,54.8973481682356,0,0,0,0,3.76929831000562,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.19638523158333,14.9298542407913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.2795320997328,1.1796972334774,46.7742926230281,0.346576998451015,0,0,0,2.25630985047772,0,0,2.88097363929565,0,0.887136517302272,0,0,0,0,0,1.09651553371436,4.46590060550365,0,6.77140866489855,0,0,2.42786241694653,6.60220354918763,0.443511850813194,0,0,0,0,0,0.111231401892069,5.49451649953598,0,0,0,0,0,0,0,0,0,0,2.48659396995644,3.58508801897295,4.14755797088455,1.29068207646083,0,0,13.5483856061097,5.72767171360125,0,0,4.58607270370949,0.196300467230486,7.31507549893617,0,0,0,13.5999078056559,0,0,0,0.22589216407792,0,0,0.231522474323834,0,0,0.735444965261716,1.64973582971138,0,0,0,0,0,0.128915775947154,0,3.03541695629618,3.17605384544123,0.320965466756673,0,2.75237570042724,0.143339583151451,0,0,0,4.2322147241232,0,0,0,0,0.109265571963696,0,0.713921808193872,0.801652215796681,0,0,1.13668047327359,0,0,0,3.41174371041569,1.90451545170992,3.35862331147232,6.02124728669822,0,1.71847327351045,1.61693751166575,4.13661821004227,1.71116650542641,1.34704106029175,3.44266585884847,2.99394320891412,27.0258851788435,0,0,0,2.34640942403454,0.733448665097199,3.25516942652591,0,0.402547587182052,0 | |||
|short_description=p@chr18:20494078..20494108,+ | |||
}} |
Latest revision as of 23:55, 25 July 2015
Short description: | p@chr18:20494078..20494108, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:20494078..20494108, + |
Coexpression cluster: | C1796_Keratinocyte_Small_Mallassezderived_cervical_Mammary_oral_malignant |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.03e-26 | 42 |
endodermal cell | 7.79e-20 | 58 |
epithelial cell | 3.94e-16 | 253 |
respiratory epithelial cell | 6.33e-15 | 13 |
epithelial cell of alimentary canal | 1.11e-12 | 20 |
general ecto-epithelial cell | 3.16e-12 | 14 |
acinar cell | 7.88e-09 | 5 |
epithelial cell of tracheobronchial tree | 2.01e-08 | 9 |
epithelial cell of lower respiratory tract | 2.01e-08 | 9 |
protein secreting cell | 2.88e-07 | 6 |
transitional epithelial cell | 3.10e-07 | 4 |
urothelial cell | 3.10e-07 | 4 |
epithelial cell of Malassez | 4.19e-07 | 3 |
gingival epithelial cell | 8.26e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 2.09e-18 | 160 |
endoderm | 2.09e-18 | 160 |
presumptive endoderm | 2.09e-18 | 160 |
respiratory system | 2.27e-18 | 74 |
orifice | 9.40e-14 | 36 |
oral opening | 1.44e-13 | 22 |
digestive system | 5.53e-13 | 145 |
digestive tract | 5.53e-13 | 145 |
primitive gut | 5.53e-13 | 145 |
anterior region of body | 1.13e-11 | 62 |
craniocervical region | 1.13e-11 | 62 |
mouth | 5.25e-11 | 29 |
stomodeum | 5.25e-11 | 29 |
surface structure | 2.36e-10 | 99 |
respiratory tract | 1.88e-09 | 54 |
head | 3.41e-09 | 56 |
urothelium | 5.81e-09 | 5 |
gland of gut | 5.82e-09 | 10 |
saliva-secreting gland | 8.11e-09 | 6 |
gland of oral region | 8.11e-09 | 6 |
gland of foregut | 8.11e-09 | 6 |
oral gland | 8.11e-09 | 6 |
oral cavity | 8.11e-09 | 6 |
subdivision of digestive tract | 8.61e-09 | 118 |
thoracic cavity element | 1.36e-07 | 34 |
thoracic cavity | 1.36e-07 | 34 |
neck | 1.57e-07 | 10 |
tracheobronchial tree | 1.78e-07 | 15 |
lower respiratory tract | 1.78e-07 | 15 |
transitional epithelium | 2.25e-07 | 6 |
thoracic segment organ | 2.84e-07 | 35 |
gland | 2.94e-07 | 59 |
foregut | 3.28e-07 | 87 |
endo-epithelium | 4.00e-07 | 82 |
gingival epithelium | 8.26e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 4.10e-13 | 14 |