FFCP PHASE1:Hg19::chr18:41513307..41513321,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:41513307..41513321,- | |||
|description=CAGE_peak_at_chr18:41513307..41513321,- | |description=CAGE_peak_at_chr18:41513307..41513321,- | ||
|id=chr18:41513307..41513321,- | |id=chr18:41513307..41513321,- | ||
|ontology_enrichment_celltype=CL:0002504!9.82e-13!3;CL:1000279!9.82e-13!3;CL:1000280!9.82e-13!3;CL:0000136!1.41e-09!15;CL:0002617!7.33e-09!2;CL:0002521!8.03e-07!3 | |ontology_enrichment_celltype=CL:0002504!9.82e-13!3;CL:1000279!9.82e-13!3;CL:1000280!9.82e-13!3;CL:0000136!1.41e-09!15;CL:0002617!7.33e-09!2;CL:0002521!8.03e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002521;7.46e-25;3!CL:0000136;4.75e-13;13!CL:0000153;5.52e-09;9!CL:0000447;5.52e-09;9!CL:0002615;2.97e-07;3!CL:0000214;2.97e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002521,7.02e-25,3;CL:0000136,1.96e-11,15;CL:0000153,5.87e-09,9;CL:0000447,5.87e-09,9;CL:0002615,2.63e-07,3;CL:0000214,3.35e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0004874;3.91e-19;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;1.42e-19;1!DOID:4549;1.42e-19;1!DOID:5861;1.42e-19;1!DOID:6496;1.42e-19;1!DOID:154;1.43e-10;2!DOID:4236;1.43e-10;2!DOID:1115;8.19e-09;20 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,1.30e-19,1;DOID:4549,1.30e-19,1;DOID:5861,1.30e-19,1;DOID:6496,1.30e-19,1;DOID:154,1.43e-10,2;DOID:4236,1.43e-10,2;DOID:1115,8.52e-09,20 | |||
|ontology_enrichment_uberon=UBERON:0001155!4.73e-11!9;UBERON:0001013!1.57e-10!14;UBERON:0000059!5.46e-09!11;UBERON:0003127!9.33e-09!2;UBERON:0002190!8.03e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002190;7.46e-25;3!UBERON:0001013;4.85e-21;14!UBERON:0000989;3.91e-19;1!UBERON:0008811;3.91e-19;1!UBERON:0002072;2.42e-15;5!UBERON:0004457;6.88e-09;9!UBERON:0000042;6.88e-09;9!UBERON:0002418;2.12e-07;3!UBERON:0004755;2.12e-07;3!UBERON:0006915;2.97e-07;3!UBERON:0007616;2.97e-07;3!UBERON:0002217;2.97e-07;3!UBERON:0002018;2.97e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002190,7.02e-25,3;UBERON:0001013,4.85e-21,14;UBERON:0000989,3.91e-19,1;UBERON:0008811,3.91e-19,1;UBERON:0006258,3.91e-19,1;UBERON:0005876,3.91e-19,1;UBERON:0004874,3.91e-19,1;UBERON:0002072,2.34e-15,5;UBERON:0002418,2.05e-07,3;UBERON:0004755,2.05e-07,3;UBERON:0006915,3.35e-07,3;UBERON:0007616,3.35e-07,3;UBERON:0002217,3.35e-07,3;UBERON:0002018,3.35e-07,3;UBERON:0004457,6.94e-07,12;UBERON:0000042,6.94e-07,12 | |||
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| ||
|short_description=p@chr18:41513307..41513321,- | |short_description=p@chr18:41513307..41513321,- | ||
}} | }} |
Latest revision as of 00:56, 26 July 2015
Short description: | p@chr18:41513307..41513321, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:41513307..41513321, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
subcutaneous fat cell | 7.02e-25 | 3 |
fat cell | 1.96e-11 | 15 |
GAG secreting cell | 5.87e-09 | 9 |
carbohydrate secreting cell | 5.87e-09 | 9 |
adipocyte of omentum tissue | 2.63e-07 | 3 |
synovial cell | 3.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
subcutaneous adipose tissue | 7.02e-25 | 3 |
adipose tissue | 4.85e-21 | 14 |
penis | 3.91e-19 | 1 |
intromittent organ | 3.91e-19 | 1 |
lateral plate mesenchyme | 3.91e-19 | 1 |
undifferentiated genital tubercle | 3.91e-19 | 1 |
somatopleure | 3.91e-19 | 1 |
hypodermis | 2.34e-15 | 5 |
cartilage tissue | 2.05e-07 | 3 |
skeletal tissue | 2.05e-07 | 3 |
stratified squamous epithelium | 3.35e-07 | 3 |
layer of synovial tissue | 3.35e-07 | 3 |
synovial joint | 3.35e-07 | 3 |
synovial membrane of synovial joint | 3.35e-07 | 3 |
cavity lining | 6.94e-07 | 12 |
serous membrane | 6.94e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 1.30e-19 | 1 |
extraosseous chondrosarcoma | 1.30e-19 | 1 |
myxoid chondrosarcoma | 1.30e-19 | 1 |
extraskeletal myxoid chondrosarcoma | 1.30e-19 | 1 |
mixed cell type cancer | 1.43e-10 | 2 |
carcinosarcoma | 1.43e-10 | 2 |
sarcoma | 8.52e-09 | 20 |