FFCP PHASE1:Hg19::chr19:18303555..18303576,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:18303555..18303576,- | |||
|description=CAGE_peak_at_chr19:18303555..18303576,- | |description=CAGE_peak_at_chr19:18303555..18303576,- | ||
|id=chr19:18303555..18303576,- | |id=chr19:18303555..18303576,- | ||
|ontology_enrichment_celltype=CL:0000738!3.68e-15!140;CL:0002057!6.37e-15!42;CL:0000860!1.31e-14!45;CL:0000766!2.01e-13!76;CL:0002031!1.00e-12!124;CL:0000557!4.08e-11!71;CL:0002087!6.54e-11!119;CL:0002009!4.74e-10!65;CL:0000037!5.31e-10!172;CL:0000566!5.31e-10!172;CL:0002032!5.92e-10!165;CL:0000837!5.92e-10!165;CL:0000839!6.77e-10!70;CL:0002194!2.90e-09!63;CL:0000576!2.90e-09!63;CL:0000040!2.90e-09!63;CL:0000559!2.90e-09!63;CL:0000988!4.74e-08!182;CL:0000763!1.72e-07!112;CL:0000049!1.72e-07!112 | |ontology_enrichment_celltype=CL:0000738!3.68e-15!140;CL:0002057!6.37e-15!42;CL:0000860!1.31e-14!45;CL:0000766!2.01e-13!76;CL:0002031!1.00e-12!124;CL:0000557!4.08e-11!71;CL:0002087!6.54e-11!119;CL:0002009!4.74e-10!65;CL:0000037!5.31e-10!172;CL:0000566!5.31e-10!172;CL:0002032!5.92e-10!165;CL:0000837!5.92e-10!165;CL:0000839!6.77e-10!70;CL:0002194!2.90e-09!63;CL:0000576!2.90e-09!63;CL:0000040!2.90e-09!63;CL:0000559!2.90e-09!63;CL:0000988!4.74e-08!182;CL:0000763!1.72e-07!112;CL:0000049!1.72e-07!112 | ||
|ontology_enrichment_celltype_v019=CL:0000236;7.86e-13;13!CL:0000775;2.69e-12;3!CL:0000766;1.73e-09;69!CL:0000094;1.09e-07;8!CL:0000097;8.96e-07;5 | |ontology_enrichment_celltype_v019=CL:0000236;7.86e-13;13!CL:0000775;2.69e-12;3!CL:0000766;1.73e-09;69!CL:0000094;1.09e-07;8!CL:0000097;8.96e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,5.99e-16,136;CL:0000766,1.71e-14,72;CL:0002032,2.14e-13,161;CL:0000837,2.14e-13,161;CL:0000037,1.57e-12,168;CL:0000775,3.00e-12,3;CL:0002031,4.43e-12,120;CL:0000236,4.97e-12,14;CL:0000988,1.61e-11,177;CL:0000763,1.94e-11,108;CL:0000049,1.94e-11,108;CL:0000860,3.38e-11,42;CL:0002057,3.38e-11,42;CL:0000557,6.20e-11,67;CL:0000839,1.22e-09,66;CL:0000473,1.92e-09,48;CL:0000234,1.92e-09,48;CL:0002393,2.45e-09,9;CL:0002397,2.45e-09,9;CL:0002087,2.84e-08,115;CL:0002009,5.55e-08,61;CL:0000094,1.12e-07,8;CL:0000097,4.64e-07,5;CL:0002028,4.64e-07,5;CL:0002194,5.20e-07,59;CL:0000576,5.20e-07,59;CL:0000040,5.20e-07,59;CL:0000559,5.20e-07,59 | |||
|ontology_enrichment_development_v019=CL:0002057;5.80e-08;42 | |ontology_enrichment_development_v019=CL:0002057;5.80e-08;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:5093;1.01e-08;4!DOID:1612;1.01e-08;4 | |ontology_enrichment_disease_v019=DOID:5093;1.01e-08;4!DOID:1612;1.01e-08;4 | ||
|ontology_enrichment_disease_v019_2=DOID:5093,1.22e-08,4;DOID:1612,1.22e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0002371!1.47e-09!80;UBERON:0001474!3.57e-08!86;UBERON:0002390!4.60e-08!102;UBERON:0003061!4.60e-08!102;UBERON:0002193!5.02e-08!112;UBERON:0002405!9.33e-08!115;UBERON:0004765!4.96e-07!101;UBERON:0001434!4.96e-07!101 | |ontology_enrichment_uberon=UBERON:0002371!1.47e-09!80;UBERON:0001474!3.57e-08!86;UBERON:0002390!4.60e-08!102;UBERON:0003061!4.60e-08!102;UBERON:0002193!5.02e-08!112;UBERON:0002405!9.33e-08!115;UBERON:0004765!4.96e-07!101;UBERON:0001434!4.96e-07!101 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.38e-09,76;UBERON:0001474,2.95e-08,82;UBERON:0004765,3.34e-07,90;UBERON:0002405,7.43e-07,93 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.140954404095971,0,0,0,0,0,0.261185628199839,0,0,0,0.263766978228454,0,0,0.672325146451775,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0.125542639594803,0.0764134057479513,0.164201178899891,0.157421562627358,0.786728553697808,0.383829398097213,0.619264493264304,0.919421224478927,0.6024118375565,0.369754010166788,0,0.284338464974843,0.880801318004542,0.553995408531877,0.601633342410425,1.08505435357926,0.447830948479849,0.32389366601898,0.515151135268373,0.726991193897824,0,0.727752183563449,0.697287110717054,0.411167888021826,0.619412741790207,0.575384784644301,0,0,1.72372840368309,1.29096936716765,1.35426486594342,0.941211697713023,0.272906150057846,0.898893937780338,0.612167784741805,0,0.639337125799041,0.659702600373432,0.598390972864896,0,0.290209238628584,0.56738522469114,1.86846674698672,1.00499466102697,0.521482918420201,0.65156653411535,0.605399502633369,0.736555271975129,0.949387162322653,1.47878700418359,1.06302149982522,0.628975936525128,3.81917345898083,1.50176892841506,1.28580469357664,1.71007646244749,0.59675003159727,1.0959849225878,3.51992488922645,1.63841583378639,2.66852776159066,1.28019066769952,0,1.72425731986345,0,3.81621501814146,1.1384259382189,0,0.382273228125229,0,0,0,0.983548850569165,0.393010762749165,0.822405995998037,0,0.651844533267181,0,0,0.222820913770347,0,0,0,0.128091319725675,0,0,0,0,0.593146252648242,0,0,0,0.766440987203842,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0.710331756132051,0,0.604820229674197,0.802320587350522,0.144824403882799,0,0,0,0,0.50133791063589,0,0,0,0.567208902984407,0.443458794925128,0,0.130979075497713,0,0,0,0,0.132957960518865,0.238490624305342,0,0,0,0,0.347140501607594,0,0,0.275118041940067,0.626984899610432,0.258416759169329,0,0.33472061276467,0.402829317109147,0,0.976248230192678,0.735326160691737,0,0.0892997282840798,0,0.112611480483322,0,0.949265659568129,0.183201743930407,1.31780417436063,0,0,0,0.12663051166458,0.397227542439656,0,0,0.560677600142307,1.06748995729705,0.24666754841716,0.311211035399766,0,0.326923806226917,0,0,0.234321431833797,0,1.71141546463335,0.149448680551801,0,0.161872944368132,0,0,0.122834317311768,0,0,0,0,0,0.336672227908132,0.125118519871964,0,0,0.612975591598039,0.150238058906597,0.113432183160021,0,0,0,0,0.103052529238439,0,0.18611685633159,0.168776332241266,0,0,0.184099797284599,0.484938170456436,0,0,0,0.386521706326594,0.272746120590835,0,0,0,0.116193942869518,0.207322110030741,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0.134831308160164,0,0.38474715694639,0,0,0.4115740113314,0,0,0,0,0.441463099414651,0.245976877086227,0,0.439001141634502,0,0,0.185176890317059,0,0,0,0,0,0.288732895522148,0.462985512576611,0.570762456703795,1.58040879591855,3.43394464837949,0.246217006087397,0,0.148631162288728,0.93733833986777,0,0.141775097242386,0,0,0,0.985326475791887,0,1.65862492432618,1.29707958075265,1.64115163454294,0,0,1.17217447210047,1.71072446022705,0,0,0,0.224262168690721,0,0,0,3.57656445851882,0,0.26593811658487,0,0.257207374262142,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0,0.224170287987055,0.197030760201927,0.646882724578552,0.385029108839245,0,0,2.31986643833309,1.00509759200609,1.27587750330633,2.24702107184155,2.99161459204025,3.31532410748828,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0.260650843404249,0,0,0,0.647142602455851,0.106727557803444,0.909382714338778,0,0,0.248107807818777,0.306923946576125,0.280660094433074,0,1.02341449813341,0.160853921143607,0,0,0,0.0821271560138091,0,0,0.362578348774867,0,0.0920809889358963,0,0,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.656029291399411,0,0.618246069886334,0.0915694648183434,0,0,0,0,0.290012154876366,0,0.15350367472613,0,0.214840489736547,0.145016693914229,0.255679882248303,0.0890320356467374,0.330569830721956,0,0.255225424989168,0.2023155617111,0,0,0,0,0.532306030317022,0.869932992075073,0.37064843820784,0.143124886741991,0.744316738719335,0,0,0.255897791311334,0,1.59101623962968,0,0,0,0.117812402345686,0.606547444719948,1.58510321173008,0,1.46290121726877,0.487426979262569,0,0.272999822815972,0,0,1.10273068709225,0.66343897524122,0.876901770507525,0,0,0.405820753925408,0.30982349809975,0.281695602532241,0,0.0982490410131212,0,0,0.211107635297664,0,0.379473173765715,0,0.288666338176536,0,1.08890984861323,0.188287601553558,0,0,0.443430153536676,0,0,0,0,0.714695326373367,0.411362273086194,0.648473311192717,0,0,0.320472213382419,0,0,0,0.28853842595289,0,0,0.399158742865633,0.191505370132367,0.635020748171649,0,0,0,0,0,0,0,0,0,1.03051603426729,0,0.223676107892416,0,0,0,0,0,0.33307196799782,0,0,0,0,1.00299045849731,0,0.47748896947538,0,0,0,0.422008249231538,0.779160935160341,0.16480387422676,1.05562704063997,1.19548792950642,0.276283915531148,0.251932747854276,0.306806047506464,0,0,0.269605053441981,0,0,0,0,0,0.969332746095218,0.278304294485554,0,0.260427761085233,1.04951999995435,0,0,0,0.236387681767936,0,0,0.520874984799877,0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|phase1_expression=0.363356758541113,0.214100523890983,0.140954404095971,0,0,0,0,0,0.261185628199839,0,0,0,0.263766978228454,0,0,0.672325146451775,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0.125542639594803,0.0764134057479513,0.164201178899891,0.157421562627358,0.786728553697808,0.383829398097213,0.619264493264304,0.919421224478927,0.6024118375565,0.369754010166788,0,0.284338464974843,0.880801318004542,0.553995408531877,0.601633342410425,1.08505435357926,0.447830948479849,0.32389366601898,0.515151135268373,0.726991193897824,0,0.727752183563449,0.697287110717054,0.411167888021826,0.619412741790207,0.575384784644301,0,0,1.72372840368309,1.29096936716765,1.35426486594342,0.941211697713023,0.272906150057846,0.898893937780338,0.612167784741805,0,0.639337125799041,0.659702600373432,0.598390972864896,0,0.290209238628584,0.56738522469114,1.86846674698672,1.00499466102697,0.521482918420201,0.65156653411535,0.605399502633369,0.736555271975129,0.949387162322653,1.47878700418359,1.06302149982522,0.628975936525128,3.81917345898083,1.50176892841506,1.28580469357664,1.71007646244749,0.59675003159727,1.0959849225878,3.51992488922645,1.63841583378639,2.66852776159066,1.28019066769952,0,1.72425731986345,0,3.81621501814146,1.1384259382189,0,0.382273228125229,0,0,0,0.983548850569165,0.393010762749165,0.822405995998037,0,0.651844533267181,0,0,0.222820913770347,0,0,0,0.128091319725675,0,0,0,0,0.593146252648242,0,0,0,0.766440987203842,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0.710331756132051,0,0.604820229674197,0.802320587350522,0.144824403882799,0,0,0,0,0.50133791063589,0,0,0,0.567208902984407,0.443458794925128,0,0.130979075497713,0,0,0,0,0.132957960518865,0.238490624305342,0,0,0,0,0.347140501607594,0,0,0.275118041940067,0.626984899610432,0.258416759169329,0,0.33472061276467,0.402829317109147,0,0.976248230192678,0.735326160691737,0,0.0892997282840798,0,0.112611480483322,0,0.949265659568129,0.183201743930407,1.31780417436063,0,0,0,0.12663051166458,0.397227542439656,0,0,0.560677600142307,1.06748995729705,0.24666754841716,0.311211035399766,0,0.326923806226917,0,0,0.234321431833797,0,1.71141546463335,0.149448680551801,0,0.161872944368132,0,0,0.122834317311768,0,0,0,0,0,0.336672227908132,0.125118519871964,0,0,0.612975591598039,0.150238058906597,0.113432183160021,0,0,0,0,0.103052529238439,0,0.18611685633159,0.168776332241266,0,0,0.184099797284599,0.484938170456436,0,0,0,0.386521706326594,0.272746120590835,0,0,0,0.116193942869518,0.207322110030741,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0.134831308160164,0,0.38474715694639,0,0,0.4115740113314,0,0,0,0,0.441463099414651,0.245976877086227,0,0.439001141634502,0,0,0.185176890317059,0,0,0,0,0,0.288732895522148,0.462985512576611,0.570762456703795,1.58040879591855,3.43394464837949,0.246217006087397,0,0.148631162288728,0.93733833986777,0,0.141775097242386,0,0,0,0.985326475791887,0,1.65862492432618,1.29707958075265,1.64115163454294,0,0,1.17217447210047,1.71072446022705,0,0,0,0.224262168690721,0,0,0,3.57656445851882,0,0.26593811658487,0,0.257207374262142,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0,0.224170287987055,0.197030760201927,0.646882724578552,0.385029108839245,0,0,2.31986643833309,1.00509759200609,1.27587750330633,2.24702107184155,2.99161459204025,3.31532410748828,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0.260650843404249,0,0,0,0.647142602455851,0.106727557803444,0.909382714338778,0,0,0.248107807818777,0.306923946576125,0.280660094433074,0,1.02341449813341,0.160853921143607,0,0,0,0.0821271560138091,0,0,0.362578348774867,0,0.0920809889358963,0,0,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.656029291399411,0,0.618246069886334,0.0915694648183434,0,0,0,0,0.290012154876366,0,0.15350367472613,0,0.214840489736547,0.145016693914229,0.255679882248303,0.0890320356467374,0.330569830721956,0,0.255225424989168,0.2023155617111,0,0,0,0,0.532306030317022,0.869932992075073,0.37064843820784,0.143124886741991,0.744316738719335,0,0,0.255897791311334,0,1.59101623962968,0,0,0,0.117812402345686,0.606547444719948,1.58510321173008,0,1.46290121726877,0.487426979262569,0,0.272999822815972,0,0,1.10273068709225,0.66343897524122,0.876901770507525,0,0,0.405820753925408,0.30982349809975,0.281695602532241,0,0.0982490410131212,0,0,0.211107635297664,0,0.379473173765715,0,0.288666338176536,0,1.08890984861323,0.188287601553558,0,0,0.443430153536676,0,0,0,0,0.714695326373367,0.411362273086194,0.648473311192717,0,0,0.320472213382419,0,0,0,0.28853842595289,0,0,0.399158742865633,0.191505370132367,0.635020748171649,0,0,0,0,0,0,0,0,0,1.03051603426729,0,0.223676107892416,0,0,0,0,0,0.33307196799782,0,0,0,0,1.00299045849731,0,0.47748896947538,0,0,0,0.422008249231538,0.779160935160341,0.16480387422676,1.05562704063997,1.19548792950642,0.276283915531148,0.251932747854276,0.306806047506464,0,0,0.269605053441981,0,0,0,0,0,0.969332746095218,0.278304294485554,0,0.260427761085233,1.04951999995435,0,0,0,0.236387681767936,0,0,0.520874984799877,0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| ||
|short_description=p@chr19:18303555..18303576,- | |short_description=p@chr19:18303555..18303576,- | ||
}} | }} |
Latest revision as of 05:03, 26 July 2015
Short description: | p@chr19:18303555..18303576, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:18303555..18303576, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 5.99e-16 | 136 |
myeloid leukocyte | 1.71e-14 | 72 |
hematopoietic oligopotent progenitor cell | 2.14e-13 | 161 |
hematopoietic multipotent progenitor cell | 2.14e-13 | 161 |
hematopoietic stem cell | 1.57e-12 | 168 |
neutrophil | 3.00e-12 | 3 |
hematopoietic lineage restricted progenitor cell | 4.43e-12 | 120 |
B cell | 4.97e-12 | 14 |
hematopoietic cell | 1.61e-11 | 177 |
myeloid cell | 1.94e-11 | 108 |
common myeloid progenitor | 1.94e-11 | 108 |
classical monocyte | 3.38e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.38e-11 | 42 |
granulocyte monocyte progenitor cell | 6.20e-11 | 67 |
myeloid lineage restricted progenitor cell | 1.22e-09 | 66 |
defensive cell | 1.92e-09 | 48 |
phagocyte | 1.92e-09 | 48 |
intermediate monocyte | 2.45e-09 | 9 |
CD14-positive, CD16-positive monocyte | 2.45e-09 | 9 |
nongranular leukocyte | 2.84e-08 | 115 |
macrophage dendritic cell progenitor | 5.55e-08 | 61 |
granulocyte | 1.12e-07 | 8 |
mast cell | 4.64e-07 | 5 |
basophil mast progenitor cell | 4.64e-07 | 5 |
monopoietic cell | 5.20e-07 | 59 |
monocyte | 5.20e-07 | 59 |
monoblast | 5.20e-07 | 59 |
promonocyte | 5.20e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.38e-09 | 76 |
bone element | 2.95e-08 | 82 |
skeletal element | 3.34e-07 | 90 |
immune system | 7.43e-07 | 93 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.22e-08 | 4 |
breast cancer | 1.22e-08 | 4 |