FFCP PHASE1:Hg19::chr19:49469548..49469569,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:49469548..49469569,+ | |||
|coexpression_cluster_id=C587 | |||
|description=CAGE_peak_at_chr19:49469548..49469569,+ | |description=CAGE_peak_at_chr19:49469548..49469569,+ | ||
|id=chr19:49469548..49469569,+ | |id=chr19:49469548..49469569,+ | ||
|ontology_enrichment_celltype=CL:0002009!1.53e-23!65;CL:0002194!2.27e-23!63;CL:0000576!2.27e-23!63;CL:0000040!2.27e-23!63;CL:0000559!2.27e-23!63;CL:0002057!2.00e-22!42;CL:0000839!3.02e-21!70;CL:0000557!3.66e-21!71;CL:0000860!6.03e-21!45;CL:0000766!1.77e-19!76;CL:0000048!8.17e-17!430;CL:0000723!4.73e-16!436;CL:0000034!1.89e-15!444;CL:0002320!3.75e-14!365;CL:0000763!3.54e-13!112;CL:0000049!3.54e-13!112;CL:0000134!1.10e-12!358;CL:0002371!1.49e-10!591;CL:0000219!4.86e-09!390;CL:0000144!9.58e-09!625;CL:0000548!8.61e-07!679;CL:0000004!8.61e-07!679;CL:0000255!8.61e-07!679 | |ontology_enrichment_celltype=CL:0002009!1.53e-23!65;CL:0002194!2.27e-23!63;CL:0000576!2.27e-23!63;CL:0000040!2.27e-23!63;CL:0000559!2.27e-23!63;CL:0002057!2.00e-22!42;CL:0000839!3.02e-21!70;CL:0000557!3.66e-21!71;CL:0000860!6.03e-21!45;CL:0000766!1.77e-19!76;CL:0000048!8.17e-17!430;CL:0000723!4.73e-16!436;CL:0000034!1.89e-15!444;CL:0002320!3.75e-14!365;CL:0000763!3.54e-13!112;CL:0000049!3.54e-13!112;CL:0000134!1.10e-12!358;CL:0002371!1.49e-10!591;CL:0000219!4.86e-09!390;CL:0000144!9.58e-09!625;CL:0000548!8.61e-07!679;CL:0000004!8.61e-07!679;CL:0000255!8.61e-07!679 | ||
|ontology_enrichment_celltype_v019=CL:0000473;8.28e-20;39!CL:0000234;8.28e-20;39!CL:0000860;1.36e-19;33!CL:0002057;1.36e-19;33!CL:0000576;6.91e-16;48!CL:0000766;1.56e-10;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.36e-27,48;CL:0000234,1.36e-27,48;CL:0002009,6.60e-26,61;CL:0002194,9.15e-26,59;CL:0000576,9.15e-26,59;CL:0000040,9.15e-26,59;CL:0000559,9.15e-26,59;CL:0000860,1.90e-23,42;CL:0002057,1.90e-23,42;CL:0000557,2.19e-23,67;CL:0000839,3.20e-23,66;CL:0000766,1.80e-21,72;CL:0000048,7.20e-18,427;CL:0000723,4.87e-17,433;CL:0000034,1.69e-16,441;CL:0002320,4.38e-15,361;CL:0000763,1.62e-14,108;CL:0000049,1.62e-14,108;CL:0000134,1.58e-13,354;CL:0000219,6.45e-10,386 | |||
|ontology_enrichment_development_v019=CL:0002057;2.48e-17;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.21e-20!80;UBERON:0002405!6.49e-20!115;UBERON:0001474!4.26e-17!86;UBERON:0002204!1.45e-16!167;UBERON:0002390!3.04e-16!102;UBERON:0003061!3.04e-16!102;UBERON:0002193!3.26e-16!112;UBERON:0004765!3.80e-15!101;UBERON:0001434!3.80e-15!101;UBERON:0003081!2.13e-14!216;UBERON:0002384!3.79e-13!375;UBERON:0000926!2.62e-11!448;UBERON:0004120!2.62e-11!448;UBERON:0006603!2.62e-11!448 | |ontology_enrichment_uberon=UBERON:0002371!2.21e-20!80;UBERON:0002405!6.49e-20!115;UBERON:0001474!4.26e-17!86;UBERON:0002204!1.45e-16!167;UBERON:0002390!3.04e-16!102;UBERON:0003061!3.04e-16!102;UBERON:0002193!3.26e-16!112;UBERON:0004765!3.80e-15!101;UBERON:0001434!3.80e-15!101;UBERON:0003081!2.13e-14!216;UBERON:0002384!3.79e-13!375;UBERON:0000926!2.62e-11!448;UBERON:0004120!2.62e-11!448;UBERON:0006603!2.62e-11!448 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.96e-22,76;UBERON:0001474,3.09e-19,82;UBERON:0002204,1.29e-18,167;UBERON:0004765,2.02e-18,90;UBERON:0002405,3.73e-18,93;UBERON:0001434,2.04e-17,100;UBERON:0002193,3.02e-17,108;UBERON:0002390,3.42e-17,98;UBERON:0003061,3.42e-17,98;UBERON:0000926,9.12e-17,315;UBERON:0004120,9.12e-17,315;UBERON:0006603,9.12e-17,315;UBERON:0003081,4.80e-15,203;UBERON:0002384,4.21e-14,371 | |||
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| ||
|short_description=p@chr19:49469548..49469569,+ | |short_description=p@chr19:49469548..49469569,+ | ||
}} | }} |
Latest revision as of 15:57, 27 July 2015
Short description: | p@chr19:49469548..49469569, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:49469548..49469569, + |
Coexpression cluster: | C587_Osteoblast_Monocytederived_CD14_Macrophage_leiomyoma_Adipocyte_Dendritic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.36e-27 | 48 |
phagocyte | 1.36e-27 | 48 |
macrophage dendritic cell progenitor | 6.60e-26 | 61 |
monopoietic cell | 9.15e-26 | 59 |
monocyte | 9.15e-26 | 59 |
monoblast | 9.15e-26 | 59 |
promonocyte | 9.15e-26 | 59 |
classical monocyte | 1.90e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.90e-23 | 42 |
granulocyte monocyte progenitor cell | 2.19e-23 | 67 |
myeloid lineage restricted progenitor cell | 3.20e-23 | 66 |
myeloid leukocyte | 1.80e-21 | 72 |
multi fate stem cell | 7.20e-18 | 427 |
somatic stem cell | 4.87e-17 | 433 |
stem cell | 1.69e-16 | 441 |
connective tissue cell | 4.38e-15 | 361 |
myeloid cell | 1.62e-14 | 108 |
common myeloid progenitor | 1.62e-14 | 108 |
mesenchymal cell | 1.58e-13 | 354 |
motile cell | 6.45e-10 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.96e-22 | 76 |
bone element | 3.09e-19 | 82 |
musculoskeletal system | 1.29e-18 | 167 |
skeletal element | 2.02e-18 | 90 |
immune system | 3.73e-18 | 93 |
skeletal system | 2.04e-17 | 100 |
hemolymphoid system | 3.02e-17 | 108 |
hematopoietic system | 3.42e-17 | 98 |
blood island | 3.42e-17 | 98 |
mesoderm | 9.12e-17 | 315 |
mesoderm-derived structure | 9.12e-17 | 315 |
presumptive mesoderm | 9.12e-17 | 315 |
lateral plate mesoderm | 4.80e-15 | 203 |
connective tissue | 4.21e-14 | 371 |