FFCP PHASE1:Hg19::chr19:54062498..54062552,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:54062498..54062552,+ | |||
|coexpression_cluster_id=C437 | |coexpression_cluster_id=C437 | ||
|description=CAGE_peak_at_chr19:54062498..54062552,+ | |description=CAGE_peak_at_chr19:54062498..54062552,+ | ||
|id=chr19:54062498..54062552,+ | |id=chr19:54062498..54062552,+ | ||
|ontology_enrichment_celltype=CL:0000738!3.24e-13!140;CL:0002057!1.04e-12!42;CL:0002031!1.45e-12!124;CL:0000860!2.28e-12!45;CL:0002087!1.20e-11!119;CL:0000557!3.31e-11!71;CL:0000839!1.73e-10!70;CL:0000766!1.71e-09!76;CL:0002009!2.48e-09!65;CL:0000037!5.36e-09!172;CL:0000566!5.36e-09!172;CL:0002194!2.04e-08!63;CL:0000576!2.04e-08!63;CL:0000040!2.04e-08!63;CL:0000559!2.04e-08!63;CL:0002032!4.10e-08!165;CL:0000837!4.10e-08!165;CL:0000988!8.85e-08!182;CL:0000624!5.72e-07!6 | |ontology_enrichment_celltype=CL:0000738!3.24e-13!140;CL:0002057!1.04e-12!42;CL:0002031!1.45e-12!124;CL:0000860!2.28e-12!45;CL:0002087!1.20e-11!119;CL:0000557!3.31e-11!71;CL:0000839!1.73e-10!70;CL:0000766!1.71e-09!76;CL:0002009!2.48e-09!65;CL:0000037!5.36e-09!172;CL:0000566!5.36e-09!172;CL:0002194!2.04e-08!63;CL:0000576!2.04e-08!63;CL:0000040!2.04e-08!63;CL:0000559!2.04e-08!63;CL:0002032!4.10e-08!165;CL:0000837!4.10e-08!165;CL:0000988!8.85e-08!182;CL:0000624!5.72e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000624;6.13e-18;6!CL:0000791;2.78e-12;18!CL:0000789;2.78e-12;18!CL:0002419;2.78e-12;18!CL:0000623;3.18e-10;3!CL:0000226;6.98e-10;3!CL:0000842;6.98e-10;3!CL:0000898;3.13e-09;3!CL:0000084;2.57e-08;25!CL:0000815;5.65e-07;2!CL:0000792;5.65e-07;2!CL:0002677;5.65e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.18e-18,136;CL:0000624,4.11e-18,6;CL:0002031,3.77e-16,120;CL:0002087,3.86e-16,115;CL:0000037,5.38e-13,168;CL:0000791,2.31e-12,18;CL:0000789,2.31e-12,18;CL:0002420,2.31e-12,18;CL:0002419,2.31e-12,18;CL:0000790,2.31e-12,18;CL:0000988,7.06e-12,177;CL:0002032,6.40e-11,161;CL:0000837,6.40e-11,161;CL:0000623,3.01e-10,3;CL:0000825,3.01e-10,3;CL:0000226,6.51e-10,3;CL:0000842,6.51e-10,3;CL:0000838,9.47e-10,52;CL:0000542,1.70e-09,53;CL:0000051,1.70e-09,53;CL:0000898,2.08e-09,3;CL:0000084,2.27e-08,25;CL:0000827,2.27e-08,25;CL:0000557,1.42e-07,67;CL:0000815,4.89e-07,2;CL:0000792,4.89e-07,2;CL:0002677,4.89e-07,2;CL:0000860,5.94e-07,42;CL:0002057,5.94e-07,42;CL:0000766,6.82e-07,72;CL:0000473,8.29e-07,48;CL:0000234,8.29e-07,48;CL:0000839,9.44e-07,66 | |||
|ontology_enrichment_development_v019=CL:0000790;2.78e-12;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.59e-18!115;UBERON:0001049!2.56e-15!57;UBERON:0005068!2.56e-15!57;UBERON:0006241!2.56e-15!57;UBERON:0007135!2.56e-15!57;UBERON:0003080!4.07e-12!42;UBERON:0002616!1.66e-11!59;UBERON:0002780!1.75e-11!41;UBERON:0001890!1.75e-11!41;UBERON:0006240!1.75e-11!41;UBERON:0002346!1.94e-10!90;UBERON:0003075!2.77e-10!86;UBERON:0007284!2.77e-10!86;UBERON:0001474!1.72e-09!86;UBERON:0000955!2.91e-09!69;UBERON:0006238!2.91e-09!69;UBERON:0002371!5.30e-09!80;UBERON:0002020!6.36e-09!34;UBERON:0003528!6.36e-09!34;UBERON:0000073!6.42e-09!94;UBERON:0001016!6.42e-09!94;UBERON:0002390!8.83e-09!102;UBERON:0003061!8.83e-09!102;UBERON:0001893!1.13e-08!34;UBERON:0001017!1.47e-08!82;UBERON:0005743!1.85e-08!86;UBERON:0002791!2.33e-08!33;UBERON:0001869!5.39e-08!32;UBERON:0002193!7.38e-08!112;UBERON:0002619!1.74e-07!22;UBERON:0003056!4.66e-07!61;UBERON:0004765!6.12e-07!101;UBERON:0001434!6.12e-07!101 | |ontology_enrichment_uberon=UBERON:0007023!2.59e-18!115;UBERON:0001049!2.56e-15!57;UBERON:0005068!2.56e-15!57;UBERON:0006241!2.56e-15!57;UBERON:0007135!2.56e-15!57;UBERON:0003080!4.07e-12!42;UBERON:0002616!1.66e-11!59;UBERON:0002780!1.75e-11!41;UBERON:0001890!1.75e-11!41;UBERON:0006240!1.75e-11!41;UBERON:0002346!1.94e-10!90;UBERON:0003075!2.77e-10!86;UBERON:0007284!2.77e-10!86;UBERON:0001474!1.72e-09!86;UBERON:0000955!2.91e-09!69;UBERON:0006238!2.91e-09!69;UBERON:0002371!5.30e-09!80;UBERON:0002020!6.36e-09!34;UBERON:0003528!6.36e-09!34;UBERON:0000073!6.42e-09!94;UBERON:0001016!6.42e-09!94;UBERON:0002390!8.83e-09!102;UBERON:0003061!8.83e-09!102;UBERON:0001893!1.13e-08!34;UBERON:0001017!1.47e-08!82;UBERON:0005743!1.85e-08!86;UBERON:0002791!2.33e-08!33;UBERON:0001869!5.39e-08!32;UBERON:0002193!7.38e-08!112;UBERON:0002619!1.74e-07!22;UBERON:0003056!4.66e-07!61;UBERON:0004765!6.12e-07!101;UBERON:0001434!6.12e-07!101 | ||
|ontology_enrichment_uberon_v019=UBERON:0003296;3.23e-11;4!UBERON:0010133;3.23e-11;4!UBERON:0003978;7.85e-09;3!UBERON:0000946;7.85e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003296,5.90e-11,4;UBERON:0010133,5.90e-11,4;UBERON:0003978,6.77e-09,3;UBERON:0009751,6.77e-09,3;UBERON:0000946,6.77e-09,3;UBERON:0002523,6.77e-09,3;UBERON:0005983,6.77e-09,3;UBERON:0002165,6.77e-09,3;UBERON:0002062,6.77e-09,3;UBERON:0007280,6.77e-09,3;UBERON:0002390,3.84e-07,98;UBERON:0003061,3.84e-07,98 | |||
|phase1_expression=0,0.214100523890983,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164201178899891,0.157421562627358,0,0.383829398097213,0,0,0,0,0,0,0,0.553995408531877,3.00816671205213,2.17010870715852,0.223915474239924,0,0,0.145398238779565,0,0,0.464858073811369,2.05583944010913,1.23882548358041,1.1507695692886,1.2808035326455,0,0.689491361473237,3.87290810150296,2.70852973188684,0.564727018627814,0.272906150057846,0.224723484445085,0.306083892370903,0.962787081228281,2.55734850319616,0.659702600373432,0.398927315243264,0,0.580418477257168,0.56738522469114,0,3.51748131359441,3.12889751052121,0.65156653411535,1.21079900526674,0,0.316462387440884,0.211255286311942,0.425208599930087,0,0.22465726229299,0.300353785683013,0.964353520182481,0,0.19891667719909,0,0,0,0,0,0,0,0,0,11.384259382189,4.11066032559657,8.02773779062981,0,0.560508562981536,0.263384084775077,10.0321982758055,18.0784950864616,13.5696989339676,0.167186495390678,3.91106719960308,2.8406868344084,1.94826728407911,0,3.24066498222321,0.443067789167242,2.43723477388514,0.25618263945135,0.130059347559878,0.328875809207352,0.276350017785848,0.289803085735052,4.89345658434799,0.535081656179426,5.22677619024884,0.113309342697566,1.53288197440768,1.03088233644789,1.26509846009751,0.318565414324097,0,0,0.150575119077773,0,0,0,0,8.46748321543876,8.29064606928873,17.8134016775843,0,0,0,0,0,0.144846518960824,0,0,0,0.221729397462564,0,0.130979075497713,0,0,0.324547393654683,0,0,0.715471872916026,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0.122834317311768,0.103325781175765,0,0,0,0,0,0.250237039743928,0,0,0,0,0,0,0,0,0,0,0.515281080091258,0,0,0,0.252433774244115,0.0920498986422993,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0.72995471815166,0,0,0,0,0,0,0,0,0.110293972732394,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0,0.462985512576611,0.190254152234598,0,0,0.246217006087397,0,0,0,0,0,0.0895585227028483,0,0,0.985326475791887,0.088048434013226,5.1832028885193,3.17063897517315,1.00993946741104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00451418286425,0,0,0,0,0.144781306667579,0,0.358121926479791,0,7.09310736726938,8.62510299438069,10.3957859386596,0,0,0.773288812777695,0,0,0,5.9832291840805,0,0,0,0,0,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0,0,0,5.99627275756373,3.66714141391649,5.01619521676188,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0.256450125116389,0,0,0.206082023295445,0.366277859273374,0.330037999682352,0,0,0,0,0,0,0,0.107420244868274,0,0,0.0890320356467374,0,0,0.127612712494584,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0.376575203107117,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0.743212700502875,0,0.284567373393656,0.159426272728822,0.199579371432817,0,0,0,0.280797178113459,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0.296964680832639,0,0.994147647766298,0.281338832821026,0,0,0.844501632511974,1.39473591775749,0.276283915531148,0,0,0,0,0,0,0,0.690503839458535,0,0,0,0.371072392647405,0,0,0.0874599999961957,1.44999915086959,0,0,0.236387681767936,0,0,0.347249989866585,1.77148277162768,0.120596438625408,0,0.995213339381022,0.886642856860642,0,0,0,0.692552326534174,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0.317873157960757,0,0.163232808159148,0.141353071433941,0,0,0.265372693510018,0,0.889563386041866,0,0,0.134802265961354,0.802577647298789,0,0,0,0,0,0,0.61214552326098,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0.138674673013139,0,0,0.0870592065804026,0.698906672968121,0,0.0967563312890851,0.0730893170861856,0,0.290967049465258,0.0882561266915003,0.225980740780532,0,0,0.253243183823515,0.977756913674015,0.320635281006135,1.28071796843612,0,0,0,0.514784993585894,0,0,0.707082103850386,0.135904206073614,0.104602846312333,0,0,0,0.821432273351958,0,0,0.262887354279314,3.0721064139948,1.3749625440701,1.43574604915363,0,0,0,0.134366944973453,0,0,0.0787831823072236,0,0,0,0,1.59045937961861,0.408610218334727,0,0,0,1.349843349309,0.77380195455795,0.121499113316049,0,0,0.0524545881349981,0,0,0.191915197319445,0,0,0,0,0,0,0,0.903017728242729,0,0,0.146552233678082,0,0.517131825446202,0.26446520348538,0,0,0.854299300541557,0.314408610199332,2.07119527673598,0,0,0,0,0.544017803369474,0,0,0,0,0.886068179966986,0.488105059607853,0.751145584238999,1.14681839138014,0.776503360757966,0.372578417648301,0,0,0.151649117541648,0,0.235265819698172,0.468334905806882,0,0.298509605773748,0,0,0.568209015825267,0,0,0,0.604923695052956,0,0,0,0,0,2.07353103920428,0,0.521745061811734,0,1.52322084867518,0.406870733204662,0,0.107410557042488,0.464033759878494,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0.530067437837643,0,0,0,0.345430341731199,0,0.967809053062115,0.194860308839388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| ||
|short_description=p@chr19:54062498..54062552,+ | |short_description=p@chr19:54062498..54062552,+ | ||
}} | }} |
Latest revision as of 17:00, 27 July 2015
Short description: | p@chr19:54062498..54062552, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:54062498..54062552, + |
Coexpression cluster: | C437_CD4_CD8_Natural_CD19_thyroid_Peripheral_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gland of diencephalon | 5.90e-11 | 4 |
neuroendocrine gland | 5.90e-11 | 4 |
valve | 6.77e-09 | 3 |
cardiac mesenchyme | 6.77e-09 | 3 |
cardial valve | 6.77e-09 | 3 |
tunica intima | 6.77e-09 | 3 |
heart layer | 6.77e-09 | 3 |
endocardium | 6.77e-09 | 3 |
endocardial cushion | 6.77e-09 | 3 |
presumptive endocardium | 6.77e-09 | 3 |
hematopoietic system | 3.84e-07 | 98 |
blood island | 3.84e-07 | 98 |