FFCP PHASE1:Hg19::chr19:6663488..6663497,-: Difference between revisions
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|id=chr19:6663488..6663497,-
|short_description=p5@AK026704
|description=CAGE_peak_5_at_AK026704_5end
|association_with_transcript=-19bp_to_AK026704_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-19bp_to_AK026704_5end | |||
|cluster_id=chr19:6663488..6663497,- | |||
|coexpression_cluster_id=C244 | |||
|description=CAGE_peak_5_at_AK026704_5end | |||
|id=chr19:6663488..6663497,- | |||
|ontology_enrichment_celltype=CL:0002057!3.72e-44!42;CL:0000860!1.49e-40!45;CL:0002031!7.25e-40!124;CL:0002087!1.91e-38!119;CL:0002009!1.09e-36!65;CL:0002194!7.60e-36!63;CL:0000576!7.60e-36!63;CL:0000040!7.60e-36!63;CL:0000559!7.60e-36!63;CL:0000839!2.28e-35!70;CL:0000738!4.12e-35!140;CL:0000557!7.71e-35!71;CL:0000766!8.50e-32!76;CL:0002032!1.83e-31!165;CL:0000837!1.83e-31!165;CL:0000037!8.15e-31!172;CL:0000566!8.15e-31!172;CL:0000988!1.70e-29!182;CL:0000763!1.03e-24!112;CL:0000049!1.03e-24!112;CL:0000134!1.71e-09!358;CL:0002320!5.14e-09!365;CL:0000219!2.35e-07!390;CL:0000838!5.99e-07!52;CL:0000542!9.51e-07!53;CL:0000051!9.51e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.05e-115;33!CL:0002057;2.05e-115;33!CL:0000473;1.21e-78;39!CL:0000234;1.21e-78;39!CL:0000576;8.87e-52;48!CL:0000766;8.74e-29;69!CL:0000763;3.34e-15;100!CL:0002087;9.45e-13;104!CL:0000738;7.52e-09;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.09e-95,42;CL:0002057,1.09e-95,42;CL:0000473,3.48e-83,48;CL:0000234,3.48e-83,48;CL:0002194,1.13e-65,59;CL:0000576,1.13e-65,59;CL:0000040,1.13e-65,59;CL:0000559,1.13e-65,59;CL:0002009,2.07e-63,61;CL:0000839,2.38e-58,66;CL:0000557,2.00e-57,67;CL:0000766,3.45e-53,72;CL:0000763,4.21e-37,108;CL:0000049,4.21e-37,108;CL:0002087,8.43e-32,115;CL:0002031,2.68e-30,120;CL:0000738,3.18e-26,136;CL:0002032,1.94e-23,161;CL:0000837,1.94e-23,161;CL:0000037,2.85e-22,168;CL:0000988,6.60e-21,177;CL:0000134,5.61e-10,354;CL:0002320,1.10e-09,361;CL:0000219,1.18e-08,386;CL:0000048,2.15e-07,427;CL:0000723,3.21e-07,433;CL:0000034,5.40e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;5.43e-71;42!CL:0000049;7.68e-13;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.37e-35!102;UBERON:0003061!7.37e-35!102;UBERON:0002193!1.49e-30!112;UBERON:0002371!1.11e-29!80;UBERON:0001474!7.56e-27!86;UBERON:0002405!1.18e-23!115;UBERON:0004765!1.16e-22!101;UBERON:0001434!1.16e-22!101;UBERON:0003081!2.21e-13!216;UBERON:0002204!5.25e-11!167;UBERON:0002384!2.28e-08!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0002134;1.06e-07;1!UBERON:0005208;1.06e-07;1!UBERON:0004145;1.06e-07;1!UBERON:0005946;1.06e-07;1!UBERON:0005965;1.06e-07;1!UBERON:0002078;1.06e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.41e-50,76;UBERON:0001474,3.05e-46,82;UBERON:0004765,8.80e-42,90;UBERON:0002390,2.41e-41,98;UBERON:0003061,2.41e-41,98;UBERON:0002405,2.64e-40,93;UBERON:0001434,3.37e-37,100;UBERON:0002193,3.95e-37,108;UBERON:0002204,1.57e-20,167;UBERON:0003081,2.76e-19,203;UBERON:0000926,1.05e-10,315;UBERON:0004120,1.05e-10,315;UBERON:0006603,1.05e-10,315;UBERON:0002384,2.75e-09,371;UBERON:0002134,1.14e-07,1;UBERON:0005208,1.14e-07,1;UBERON:0005946,1.14e-07,1;UBERON:0005965,1.14e-07,1;UBERON:0002078,1.14e-07,1 | |||
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| ||
|short_description=p5@AK026704 | |||
}} | }} |
Latest revision as of 18:13, 27 July 2015
Short description: | p5@AK026704 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_AK026704_5end |
Coexpression cluster: | C244_CD14_Monocytederived_Hepatocyte_heart_Neutrophils_acute_Macrophage |
Association with transcript: | -19bp_to_AK026704_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.09e-95 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.09e-95 | 42 |
defensive cell | 3.48e-83 | 48 |
phagocyte | 3.48e-83 | 48 |
monopoietic cell | 1.13e-65 | 59 |
monocyte | 1.13e-65 | 59 |
monoblast | 1.13e-65 | 59 |
promonocyte | 1.13e-65 | 59 |
macrophage dendritic cell progenitor | 2.07e-63 | 61 |
myeloid lineage restricted progenitor cell | 2.38e-58 | 66 |
granulocyte monocyte progenitor cell | 2.00e-57 | 67 |
myeloid leukocyte | 3.45e-53 | 72 |
myeloid cell | 4.21e-37 | 108 |
common myeloid progenitor | 4.21e-37 | 108 |
nongranular leukocyte | 8.43e-32 | 115 |
hematopoietic lineage restricted progenitor cell | 2.68e-30 | 120 |
leukocyte | 3.18e-26 | 136 |
hematopoietic oligopotent progenitor cell | 1.94e-23 | 161 |
hematopoietic multipotent progenitor cell | 1.94e-23 | 161 |
hematopoietic stem cell | 2.85e-22 | 168 |
hematopoietic cell | 6.60e-21 | 177 |
mesenchymal cell | 5.61e-10 | 354 |
connective tissue cell | 1.10e-09 | 361 |
motile cell | 1.18e-08 | 386 |
multi fate stem cell | 2.15e-07 | 427 |
somatic stem cell | 3.21e-07 | 433 |
stem cell | 5.40e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.41e-50 | 76 |
bone element | 3.05e-46 | 82 |
skeletal element | 8.80e-42 | 90 |
hematopoietic system | 2.41e-41 | 98 |
blood island | 2.41e-41 | 98 |
immune system | 2.64e-40 | 93 |
skeletal system | 3.37e-37 | 100 |
hemolymphoid system | 3.95e-37 | 108 |
musculoskeletal system | 1.57e-20 | 167 |
lateral plate mesoderm | 2.76e-19 | 203 |
mesoderm | 1.05e-10 | 315 |
mesoderm-derived structure | 1.05e-10 | 315 |
presumptive mesoderm | 1.05e-10 | 315 |
connective tissue | 2.75e-09 | 371 |
tricuspid valve | 1.14e-07 | 1 |
right atrium valve | 1.14e-07 | 1 |
outflow tract of atrium | 1.14e-07 | 1 |
outflow part of right atrium | 1.14e-07 | 1 |
right cardiac atrium | 1.14e-07 | 1 |