FFCP PHASE1:Hg19::chr1:111050845..111050854,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:111050845..111050854,+ | |||
|coexpression_cluster_id=C166 | |||
|description=CAGE_peak_at_chr1:111050845..111050854,+ | |||
|id=chr1:111050845..111050854,+ | |||
|ontology_enrichment_celltype=CL:0002619!2.40e-29!3;CL:0000840!3.34e-26!5;CL:0001029!3.34e-26!5;CL:0000990!1.44e-17!8;CL:0002009!4.44e-16!65;CL:0000557!1.34e-14!71;CL:0000451!2.03e-14!10;CL:0002194!1.08e-13!63;CL:0000576!1.08e-13!63;CL:0000040!1.08e-13!63;CL:0000559!1.08e-13!63;CL:0000839!3.38e-12!70;CL:0000766!3.93e-11!76;CL:0000235!1.78e-09!10;CL:0002031!3.14e-09!124;CL:0000763!1.11e-08!112;CL:0000049!1.11e-08!112;CL:0002087!4.73e-08!119;CL:0000738!5.81e-08!140 | |||
|ontology_enrichment_celltype_v019=CL:0000235;7.14e-38;6!CL:0000840;1.52e-37;5!CL:0000990;2.47e-25;8!CL:0000451;6.99e-21;10!CL:0002619;1.53e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,5.56e-38,6;CL:0000840,1.34e-37,5;CL:0001029,1.34e-37,5;CL:0000990,2.27e-25,8;CL:0000451,6.54e-21,10;CL:0002194,2.85e-20,59;CL:0000576,2.85e-20,59;CL:0000040,2.85e-20,59;CL:0000559,2.85e-20,59;CL:0002009,1.27e-19,61;CL:0000839,3.63e-18,66;CL:0000557,6.69e-18,67;CL:0000766,1.11e-16,72;CL:0000763,3.49e-11,108;CL:0000049,3.49e-11,108;CL:0002087,1.65e-10,115;CL:0002031,4.51e-10,120;CL:0002619,1.67e-09,3;CL:0000738,6.88e-09,136;CL:0002032,1.68e-07,161;CL:0000837,1.68e-07,161;CL:0000037,3.48e-07,168;CL:0000988,8.17e-07,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050619!1.46e-10!1;DOID:1357!1.46e-10!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!8.69e-13!80;UBERON:0001474!8.68e-12!86;UBERON:0002171!5.05e-11!1;UBERON:0006518!5.05e-11!1;UBERON:0008949!5.05e-11!1;UBERON:0000101!5.05e-11!1;UBERON:0002167!5.05e-11!1;UBERON:0001764!1.46e-10!1;UBERON:0001825!1.46e-10!1;UBERON:0004765!8.41e-10!101;UBERON:0001434!8.41e-10!101;UBERON:0002390!1.09e-09!102;UBERON:0003061!1.09e-09!102;UBERON:0002193!1.11e-08!112;UBERON:0002405!2.07e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;7.62e-26;1!UBERON:0006518;7.62e-26;1!UBERON:0008949;7.62e-26;1!UBERON:0000101;7.62e-26;1!UBERON:0002167;7.62e-26;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,1.26e-25,1;UBERON:0006518,1.26e-25,1;UBERON:0008949,1.26e-25,1;UBERON:0000101,1.26e-25,1;UBERON:0002167,1.26e-25,1;UBERON:0002371,8.08e-16,76;UBERON:0001474,1.11e-14,82;UBERON:0004765,2.15e-13,90;UBERON:0002405,5.74e-13,93;UBERON:0002390,2.59e-12,98;UBERON:0003061,2.59e-12,98;UBERON:0001434,4.53e-12,100;UBERON:0002193,3.49e-11,108;UBERON:0002204,3.15e-07,167 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34349284543955,0.647787332037959,0.77272670290256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,1.62273696827342,1.56716763569341,2.6591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96973604869918,4.91408956792399,3.12125440806329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,1.24271716604159,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:111050845..111050854,+ | |||
}} |
Latest revision as of 19:32, 27 July 2015
Short description: | p@chr1:111050845..111050854, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:111050845..111050854, + |
Coexpression cluster: | C166_Macrophage_Monocytederived_Dendritic_adipose_lymph_CD14_lung |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 5.56e-38 | 6 |
immature conventional dendritic cell | 1.34e-37 | 5 |
common dendritic progenitor | 1.34e-37 | 5 |
conventional dendritic cell | 2.27e-25 | 8 |
dendritic cell | 6.54e-21 | 10 |
monopoietic cell | 2.85e-20 | 59 |
monocyte | 2.85e-20 | 59 |
monoblast | 2.85e-20 | 59 |
promonocyte | 2.85e-20 | 59 |
macrophage dendritic cell progenitor | 1.27e-19 | 61 |
myeloid lineage restricted progenitor cell | 3.63e-18 | 66 |
granulocyte monocyte progenitor cell | 6.69e-18 | 67 |
myeloid leukocyte | 1.11e-16 | 72 |
myeloid cell | 3.49e-11 | 108 |
common myeloid progenitor | 3.49e-11 | 108 |
nongranular leukocyte | 1.65e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 4.51e-10 | 120 |
adult endothelial progenitor cell | 1.67e-09 | 3 |
leukocyte | 6.88e-09 | 136 |
hematopoietic oligopotent progenitor cell | 1.68e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.68e-07 | 161 |
hematopoietic stem cell | 3.48e-07 | 168 |
hematopoietic cell | 8.17e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 1.26e-25 | 1 |
right lung lobe | 1.26e-25 | 1 |
lower lobe of lung | 1.26e-25 | 1 |
lobe of lung | 1.26e-25 | 1 |
right lung | 1.26e-25 | 1 |
bone marrow | 8.08e-16 | 76 |
bone element | 1.11e-14 | 82 |
skeletal element | 2.15e-13 | 90 |
immune system | 5.74e-13 | 93 |
hematopoietic system | 2.59e-12 | 98 |
blood island | 2.59e-12 | 98 |
skeletal system | 4.53e-12 | 100 |
hemolymphoid system | 3.49e-11 | 108 |
musculoskeletal system | 3.15e-07 | 167 |