FFCP PHASE1:Hg19::chr1:12678643..12678655,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:12678643..12678655,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_at_chr1:12678643..12678655,- | |||
|id=chr1:12678643..12678655,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,1.14e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0009143;6.23e-07;1 | |||
|ontology_enrichment_disease=DOID:305!6.68e-09!106 | |||
|ontology_enrichment_disease_v019=DOID:4929;7.07e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,1.01e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0004921!2.85e-14!129;UBERON:0004185!2.85e-14!129;UBERON:0001007!5.03e-14!155;UBERON:0001555!5.03e-14!155;UBERON:0007026!5.03e-14!155;UBERON:0004119!5.57e-13!169;UBERON:0000925!5.57e-13!169;UBERON:0006595!5.57e-13!169;UBERON:0003929!1.38e-12!54;UBERON:0005911!2.15e-12!82;UBERON:0000077!5.63e-11!130;UBERON:0009497!2.85e-08!25;UBERON:0000015!2.85e-08!25;UBERON:0002423!2.85e-08!25;UBERON:0006235!2.85e-08!25;UBERON:0004161!2.85e-08!25;UBERON:0000466!3.50e-08!126;UBERON:0007499!1.30e-07!25;UBERON:0000481!1.95e-07!347;UBERON:0005156!2.90e-07!59;UBERON:0000990!2.90e-07!59;UBERON:0009856!3.79e-07!26;UBERON:0001041!7.03e-07!98;UBERON:0005177!8.18e-07!107;UBERON:0008835!9.37e-07!22;UBERON:0003894!9.37e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0002108;3.69e-18;4!UBERON:0000160;3.42e-14;17!UBERON:0005409;6.54e-11;22!UBERON:0002368;8.85e-11;33!UBERON:0002423;2.18e-10;25!UBERON:0000949;1.61e-09;43!UBERON:0004921;1.56e-08;33!UBERON:0002114;3.34e-08;2!UBERON:0002107;2.07e-07;19!UBERON:0006925;2.07e-07;19!UBERON:0004913;6.23e-07;1!UBERON:0003703;6.23e-07;1!UBERON:0001174;6.23e-07;1!UBERON:0004914;6.23e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,2.78e-18,4;UBERON:0000160,2.14e-14,17;UBERON:0007499,2.24e-13,25;UBERON:0000949,5.85e-13,45;UBERON:0009856,8.19e-13,26;UBERON:0003929,9.75e-13,54;UBERON:0004921,1.04e-12,118;UBERON:0001007,2.92e-12,145;UBERON:0001555,2.92e-12,145;UBERON:0007026,2.92e-12,145;UBERON:0008835,6.05e-12,22;UBERON:0003894,6.05e-12,22;UBERON:0002368,1.21e-11,35;UBERON:0009854,2.20e-11,23;UBERON:0004119,1.08e-10,160;UBERON:0000925,1.08e-10,160;UBERON:0006595,1.08e-10,160;UBERON:0005911,1.63e-10,82;UBERON:0009497,2.14e-10,25;UBERON:0000015,2.14e-10,25;UBERON:0002423,2.14e-10,25;UBERON:0006235,2.14e-10,25;UBERON:0004161,2.14e-10,25;UBERON:0005409,1.11e-09,25;UBERON:0002114,2.64e-08,2;UBERON:0002530,8.54e-08,59;UBERON:0002107,2.07e-07,19;UBERON:0006925,2.07e-07,19;UBERON:0008836,2.07e-07,19;UBERON:0011216,4.84e-07,223;UBERON:0004913,5.89e-07,1;UBERON:0003703,5.89e-07,1;UBERON:0001174,5.89e-07,1;UBERON:0004914,5.89e-07,1;UBERON:0001041,7.85e-07,87 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0.369363174230364,0.408001382488506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.12786256184353,0,0,0,0,0,0.0945348171640679,0.443458794925128,0.263504357079378,0.196468613246569,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0.775250277507987,0.35576626268671,0,0,0,0.488124115096339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0.560677600142307,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0.10075209822764,0,0,0,0,0,0.132529768321485,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269662616320329,0.392442930250692,0,0,0,0.4115740113314,0,11.4079531339648,9.82827216677626,6.49868897349544,0,6.14942192715568,0.343135620597051,0,0,0,0,0,0,0,0,0,0,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.87192013766656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0.871533458600294,0.99972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0.415941723061614,0,0.315404830067869,0,0,2.27407504055985,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0.248107807818777,0,0,0.256278298511402,0,0,0,0,0,0,0.519254429183621,0,2.41718899183244,0.200506470303285,0.644566922551274,0.459257792658427,0,0.262248829918848,0,0.539107359730903,0.784349769176855,0,0.105551628892876,0,0,0,0,0.812839312631559,0,0,0,0.447749509444357,0,0,0,0,0,1.23649213977267,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0.74129687641568,0.715624433709956,0,0,0,0,0,0.636406495851874,0,0,0,0,0,0,0,0.48763373908959,0,1.05650146756755,0.272999822815972,0,1.13008116620243,0,0,0,0,0,0.202910376962704,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,1.08890984861323,0.941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.23874448473769,0,0,0,0,0.556543525114529,0,0,0.19924798825107,0,0.755798243562828,0,0,0,0.449341755736634,4.83357171624145,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,1.27126825146383,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.153900517007594,0,0,0,0.217294743844016,0.638002319463839,0.0915975934018623,0,0,0,0,0.225595660617181,0.19606253431774,0,0,0,0,0.816164040795739,0.282706142867882,0,1.99052386215701,1.94606641907346,0.611030144933625,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0.063186579628488,0.150323419414493,0,0.664653872707185,1.98595173525299,0,0,1.70765727617876,0,0.173559738335131,0.195984794828755,0.0870592065804026,0.34945333648406,0,0.290268993867255,0.146178634172371,0.246346371159628,2.23074737923365,0,0.677942222341597,0,0.19871461170299,0.0633107959558787,0.195551382734803,0.0801588202515337,0.426905989478705,0.39961921916426,0.144090417154106,0,0,0,0.124252535565433,1.41416420770077,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0.236349546921671,0.494495150286999,0.674035438541849,0.0984274815147488,0,0,0,0,0,0.83088067605837,1.349843349309,0,0,0,0.945668487590378,0.472091293214983,0,0,0,0,0,0,0,0,0,0,0,0,0,4.39656701034247,5.30027555648885,0,0.13223260174269,0.855434189421647,0.704815022316672,0.640724475406168,0.628817220398664,0,0,0,0,0,0,0,0,0,0.471162288750703,0,0,0,0.573409195690071,0.110929051536852,0,0,0,0,0,0.470531639396343,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0.155262956876259,0,0,0,0.150257608997218,0.380805212168795,0,0,0.214821114084977,0,0.796191777397232,0,0,0,0,0,0,0,0,0.463044948647668,0,0.537266523244462,0,1.09642024789354,0,2.12205442098006,0.337884881306145,0,0,0,0,0.194860308839388,0,0,0,0,0.422624246717254,0,0,0,0.567515953566836,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138314504928436,0,0,0.785181748008205,0,0,0.462102664601353,0,0.690359926060101,0,0.0752103283492573,0,0,0,0.163771917510097,2.36569737947272,0,0,0,0,0,0,0.496211178389294,0,0.511049710558381,2.14280734351315,0,1.21393120847326,0.227662191351298,0.266107110487916,0,0,0,0.0657727735628491,0.118193840883968,0.111231401892069,0.39246546425257,0,0.280272163313789,0,0,0,0.428859265059938,0,0.116241425368125,0,0,0,0,0,0,0.118332000730565,0,0,1.14553434272025,0,0,0.111855431797792,0.098150233615243,0.365753774946808,0,0.205325613712494,0,0,0,0,0,0,0,0,8.25763491755008,3.27839340755936,0,0,0.235676547101626,0,0.297046400327086,0.4226557275834,0,0,0,0,1.07132363163395,0.352894871715692,0.401206833445841,0,0,0,0,0,0,1.5870805215462,0,0,0,0,0,0,0,0,0.0918948995348449,0,0.151557396436479,0,0,0,1.27940389140589,0.476128862927481,0,0,0,16.7392026271574,2.42540626749863,0.435433495793923,0.342233301085281,0.0673520530145875,0.645499848534087,0.332660356546013,0.488419611665847,0.213454691755431,0,1.07790242527904,0,0.244482888365733,0.813792356631477,0,0.201273793591026,0 | |||
|short_description=p@chr1:12678643..12678655,- | |||
}} |
Latest revision as of 20:31, 27 July 2015
Short description: | p@chr1:12678643..12678655, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:12678643..12678655, - |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 1.14e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
small intestine | 2.78e-18 | 4 |
intestine | 2.14e-14 | 17 |
epithelial sac | 2.24e-13 | 25 |
endocrine system | 5.85e-13 | 45 |
sac | 8.19e-13 | 26 |
gut epithelium | 9.75e-13 | 54 |
subdivision of digestive tract | 1.04e-12 | 118 |
digestive system | 2.92e-12 | 145 |
digestive tract | 2.92e-12 | 145 |
primitive gut | 2.92e-12 | 145 |
hepatic diverticulum | 6.05e-12 | 22 |
liver primordium | 6.05e-12 | 22 |
endocrine gland | 1.21e-11 | 35 |
digestive tract diverticulum | 2.20e-11 | 23 |
endoderm-derived structure | 1.08e-10 | 160 |
endoderm | 1.08e-10 | 160 |
presumptive endoderm | 1.08e-10 | 160 |
endo-epithelium | 1.63e-10 | 82 |
epithelium of foregut-midgut junction | 2.14e-10 | 25 |
anatomical boundary | 2.14e-10 | 25 |
hepatobiliary system | 2.14e-10 | 25 |
foregut-midgut junction | 2.14e-10 | 25 |
septum transversum | 2.14e-10 | 25 |
gastrointestinal system | 1.11e-09 | 25 |
duodenum | 2.64e-08 | 2 |
gland | 8.54e-08 | 59 |
liver | 2.07e-07 | 19 |
digestive gland | 2.07e-07 | 19 |
liver bud | 2.07e-07 | 19 |
organ system subdivision | 4.84e-07 | 223 |
hepatopancreatic ampulla | 5.89e-07 | 1 |
extrahepatic bile duct | 5.89e-07 | 1 |
common bile duct | 5.89e-07 | 1 |
duodenal papilla | 5.89e-07 | 1 |
foregut | 7.85e-07 | 87 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 1.01e-11 | 2 |