FFCP PHASE1:Hg19::chr1:156779602..156779619,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:156779602..156779619,- | |||
|coexpression_cluster_id=C53 | |||
|description=CAGE_peak_at_chr1:156779602..156779619,- | |description=CAGE_peak_at_chr1:156779602..156779619,- | ||
|id=chr1:156779602..156779619,- | |id=chr1:156779602..156779619,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000082;5.66e-15;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000082,5.66e-15,19 | |||
|ontology_enrichment_development_v019=UBERON:0008947;3.24e-10;29!UBERON:0001041;6.52e-10;30!UBERON:0006238;2.32e-07;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3905;3.59e-30;9!DOID:4556;4.09e-23;3!DOID:1324;1.24e-18;15!DOID:5409;8.69e-18;4!DOID:0050615;1.51e-17;16!DOID:3908;1.83e-14;5!DOID:1325;8.99e-11;7!DOID:3904;8.99e-11;7!DOID:3093;7.48e-07;11 | |||
|ontology_enrichment_disease_v019_2=DOID:3905,3.59e-30,9;DOID:4556,4.09e-23,3;DOID:1324,1.24e-18,15;DOID:5409,8.69e-18,4;DOID:0050615,1.51e-17,16;DOID:3908,1.83e-14,5;DOID:1325,8.99e-11,7;DOID:3904,8.99e-11,7;DOID:3093,7.48e-07,11 | |||
|ontology_enrichment_uberon=UBERON:0002370!7.79e-09!4;UBERON:0005058!7.79e-09!4;UBERON:0009113!7.79e-09!4;UBERON:0003295!7.79e-09!4;UBERON:0005562!7.79e-09!4;UBERON:0004177!1.65e-08!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0004802;5.66e-15;19!UBERON:0000115;5.66e-15;19!UBERON:0002048;4.26e-13;22!UBERON:0004807;4.26e-13;22!UBERON:0000117;4.26e-13;22!UBERON:0000171;4.26e-13;22!UBERON:0000170;4.26e-13;22!UBERON:0005178;1.30e-08;34!UBERON:0002224;1.30e-08;34!UBERON:0005911;5.78e-08;36!UBERON:0000072;5.80e-08;37!UBERON:0005181;1.03e-07;35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004802,5.66e-15,19;UBERON:0000115,5.66e-15,19;UBERON:0002048,4.26e-13,22;UBERON:0000117,4.26e-13,22;UBERON:0000171,4.26e-13,22;UBERON:0000170,4.26e-13,22;UBERON:0005597,4.26e-13,22;UBERON:0000118,4.26e-13,22;UBERON:0004807,1.54e-10,28;UBERON:0005178,7.08e-09,34;UBERON:0002224,7.08e-09,34;UBERON:0005181,1.18e-08,35;UBERON:0005153,3.03e-08,37;UBERON:0008947,4.68e-08,38;UBERON:0003258,4.68e-08,38 | |||
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| ||
|short_description=p@chr1:156779602..156779619,- | |short_description=p@chr1:156779602..156779619,- | ||
}} | }} |
Latest revision as of 22:46, 27 July 2015
Short description: | p@chr1:156779602..156779619, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:156779602..156779619, - |
Coexpression cluster: | C53_medulloblastoma_pineal_retinoblastoma_small_retina_eye_pituitary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of lung | 5.66e-15 | 19 |
Ontology term | p-value | n |
---|---|---|
respiratory tract epithelium | 5.66e-15 | 19 |
lung epithelium | 5.66e-15 | 19 |
lung | 4.26e-13 | 22 |
respiratory tube | 4.26e-13 | 22 |
respiration organ | 4.26e-13 | 22 |
pair of lungs | 4.26e-13 | 22 |
lung primordium | 4.26e-13 | 22 |
lung bud | 4.26e-13 | 22 |
respiratory system epithelium | 1.54e-10 | 28 |
thoracic cavity element | 7.08e-09 | 34 |
thoracic cavity | 7.08e-09 | 34 |
thoracic segment organ | 1.18e-08 | 35 |
epithelial bud | 3.03e-08 | 37 |
respiratory primordium | 4.68e-08 | 38 |
endoderm of foregut | 4.68e-08 | 38 |
Ontology term | p-value | n |
---|---|---|
lung carcinoma | 3.59e-30 | 9 |
lung large cell carcinoma | 4.09e-23 | 3 |
lung cancer | 1.24e-18 | 15 |
lung small cell carcinoma | 8.69e-18 | 4 |
respiratory system cancer | 1.51e-17 | 16 |
non-small cell lung carcinoma | 1.83e-14 | 5 |
bronchus cancer | 8.99e-11 | 7 |
bronchogenic carcinoma | 8.99e-11 | 7 |
nervous system cancer | 7.48e-07 | 11 |