FFCP PHASE1:Hg19::chr1:158299745..158299756,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:158299745..158299756,- | |||
|coexpression_cluster_id=C419 | |||
|description=CAGE_peak_at_chr1:158299745..158299756,- | |description=CAGE_peak_at_chr1:158299745..158299756,- | ||
|id=chr1:158299745..158299756,- | |id=chr1:158299745..158299756,- | ||
|ontology_enrichment_celltype=CL:0000840!8.46e-41!5;CL:0001029!8.46e-41!5;CL:0000990!2.27e-27!8;CL:0000451!1.78e-22!10;CL:0001014!6.42e-09!2;CL:0001016!6.42e-09!2;CL:0000738!5.71e-08!140;CL:0000037!7.26e-08!172;CL:0000566!7.26e-08!172;CL:0000988!2.23e-07!182;CL:0002031!3.58e-07!124 | |ontology_enrichment_celltype=CL:0000840!8.46e-41!5;CL:0001029!8.46e-41!5;CL:0000990!2.27e-27!8;CL:0000451!1.78e-22!10;CL:0001014!6.42e-09!2;CL:0001016!6.42e-09!2;CL:0000738!5.71e-08!140;CL:0000037!7.26e-08!172;CL:0000566!7.26e-08!172;CL:0000988!2.23e-07!182;CL:0002031!3.58e-07!124 | ||
|ontology_enrichment_celltype_v019=CL:0000084;5.27e-09;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,5.06e-09,25;CL:0000827,5.06e-09,25 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!1.61e-07!51;DOID:0060083!1.61e-07!51 | |ontology_enrichment_disease=DOID:2531!1.61e-07!51;DOID:0060083!1.61e-07!51 | ||
|ontology_enrichment_disease_v019=DOID:1036;1.49e-07;8 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,1.49e-07,8 | |||
|ontology_enrichment_uberon=UBERON:0002370!1.66e-16!4;UBERON:0005058!1.66e-16!4;UBERON:0009113!1.66e-16!4;UBERON:0003295!1.66e-16!4;UBERON:0005562!1.66e-16!4;UBERON:0003351!2.49e-11!6;UBERON:0004177!7.64e-10!7;UBERON:0000974!3.77e-07!10;UBERON:0003408!3.77e-07!10;UBERON:0001042!3.77e-07!10;UBERON:0009145!3.77e-07!10;UBERON:0002390!8.25e-07!102;UBERON:0003061!8.25e-07!102 | |ontology_enrichment_uberon=UBERON:0002370!1.66e-16!4;UBERON:0005058!1.66e-16!4;UBERON:0009113!1.66e-16!4;UBERON:0003295!1.66e-16!4;UBERON:0005562!1.66e-16!4;UBERON:0003351!2.49e-11!6;UBERON:0004177!7.64e-10!7;UBERON:0000974!3.77e-07!10;UBERON:0003408!3.77e-07!10;UBERON:0001042!3.77e-07!10;UBERON:0009145!3.77e-07!10;UBERON:0002390!8.25e-07!102;UBERON:0003061!8.25e-07!102 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;2.56e-98;2!UBERON:0005058;2.56e-98;2!UBERON:0009113;2.56e-98;2!UBERON:0004177;3.31e-40;5!UBERON:0005057;3.31e-40;5!UBERON:0000077;2.22e-08;27!UBERON:0002405;2.22e-08;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,8.47e-50,4;UBERON:0005058,8.47e-50,4;UBERON:0009113,8.47e-50,4;UBERON:0003295,8.47e-50,4;UBERON:0005562,8.47e-50,4;UBERON:0003351,1.17e-33,6;UBERON:0004177,4.86e-29,7;UBERON:0005057,4.86e-29,7;UBERON:0000974,1.04e-20,10;UBERON:0003408,1.04e-20,10;UBERON:0001042,1.04e-20,10;UBERON:0009145,1.04e-20,10;UBERON:0006562,6.17e-19,11;UBERON:0009722,6.17e-19,11;UBERON:0007690,6.17e-19,11;UBERON:0008814,5.09e-12,18;UBERON:0001557,1.91e-11,19;UBERON:0004807,4.21e-08,28;UBERON:0000077,7.40e-08,29 | |||
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|short_description=p@chr1:158299745..158299756,- | |short_description=p@chr1:158299745..158299756,- | ||
}} | }} |
Latest revision as of 22:55, 27 July 2015
Short description: | p@chr1:158299745..158299756, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:158299745..158299756, - |
Coexpression cluster: | C419_acute_chronic_thymus_xeroderma_Burkitt_Hodgkin_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 5.06e-09 | 25 |
pro-T cell | 5.06e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
thymus | 8.47e-50 | 4 |
hemolymphoid system gland | 8.47e-50 | 4 |
thymic region | 8.47e-50 | 4 |
pharyngeal gland | 8.47e-50 | 4 |
thymus primordium | 8.47e-50 | 4 |
pharyngeal epithelium | 1.17e-33 | 6 |
hemopoietic organ | 4.86e-29 | 7 |
immune organ | 4.86e-29 | 7 |
neck | 1.04e-20 | 10 |
gland of gut | 1.04e-20 | 10 |
chordate pharynx | 1.04e-20 | 10 |
pharyngeal region of foregut | 1.04e-20 | 10 |
pharynx | 6.17e-19 | 11 |
entire pharyngeal arch endoderm | 6.17e-19 | 11 |
early pharyngeal endoderm | 6.17e-19 | 11 |
pharyngeal arch system | 5.09e-12 | 18 |
upper respiratory tract | 1.91e-11 | 19 |
respiratory system epithelium | 4.21e-08 | 28 |
mixed endoderm/mesoderm-derived structure | 7.40e-08 | 29 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.49e-07 | 8 |