FFCP PHASE1:Hg19::chr1:160351280..160351285,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:160351280..160351285,+ | |||
|description=CAGE_peak_at_chr1:160351280..160351285,+ | |||
|id=chr1:160351280..160351285,+ | |||
|ontology_enrichment_celltype=CL:0000242!8.16e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000123;4.72e-28;2!CL:0000242;4.72e-28;2!CL:0000312;7.88e-12;5!CL:0000240;5.19e-10;6!CL:0000311;5.19e-10;6!CL:0000079;5.19e-10;6!CL:0000237;5.19e-10;6!CL:0000235;1.06e-09;6!CL:0000362;5.86e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,5.41e-28,2;CL:0000312,8.32e-12,5;CL:0000240,5.43e-10,6;CL:0000311,5.43e-10,6;CL:0000079,5.43e-10,6;CL:0000237,5.43e-10,6;CL:0000036,5.43e-10,6;CL:0000357,5.43e-10,6;CL:0000114,5.43e-10,6;CL:0000235,1.01e-09,6;CL:0000362,6.04e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.84e-14;1!CL:0000357;5.19e-10;6!CL:0000114;5.19e-10;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;1.84e-14;1!UBERON:0001785;1.84e-14;1!UBERON:0002464;1.84e-14;1!UBERON:0004904;1.84e-14;1!UBERON:0001021;1.84e-14;1!UBERON:0003714;7.03e-08;2!UBERON:0005162;7.03e-08;2!UBERON:0000122;7.03e-08;2!UBERON:0000010;7.31e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.61e-14,1;UBERON:0001785,1.61e-14,1;UBERON:0002464,1.61e-14,1;UBERON:0004904,1.61e-14,1;UBERON:0001021,1.61e-14,1;UBERON:0003902,1.61e-14,1;UBERON:0005425,1.61e-14,1;UBERON:0003714,6.58e-08,2;UBERON:0005162,6.58e-08,2;UBERON:0000122,6.58e-08,2;UBERON:0000010,7.21e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83884244895785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0.211255286311942,0,0,0.112328631146495,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0.130059347559878,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,2.43806866313962,0,0,0.361439152384566,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,1.63802985597466,0.445893486866185,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.0821271560138091,1.03850885836724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0.159426272728822,0,0,0,0,0,0,0.156679895773023,2.50634477090067,0.338583555603207,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.334330152832435,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,3.10269035917318,0,0.347249989866585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0,1.02956998717179,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0.916641696046735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0.138348634936231,0,0,0,0,4.21501415226193,2.3187364577732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0.106691729694141,0.172214979660816,0,0,0,0,3.06946491128764,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0.159633859057151,0.205116364240755,0,0,0,1.42769420259154,0,0,0.183428598521679,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0.546974809018219,0,0.992422356778588,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0.111231401892069,0,0,0,0,0,0,0,0.158013611732727,0,0.173858272302579,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0.237840181555137,0,1.64910775118144,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0.126698501011437,0,0,0.0918948995348449,0,0,0,0.829169439458779,0.103432995861895,0,0.23806443146374,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:160351280..160351285,+ | |||
}} |
Latest revision as of 23:21, 27 July 2015
Short description: | p@chr1:160351280..160351285, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:160351280..160351285, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 5.41e-28 | 2 |
keratinocyte | 8.32e-12 | 5 |
stratified squamous epithelial cell | 5.43e-10 | 6 |
keratin accumulating cell | 5.43e-10 | 6 |
stratified epithelial cell | 5.43e-10 | 6 |
keratinizing barrier epithelial cell | 5.43e-10 | 6 |
epithelial fate stem cell | 5.43e-10 | 6 |
stratified epithelial stem cell | 5.43e-10 | 6 |
surface ectodermal cell | 5.43e-10 | 6 |
macrophage | 1.01e-09 | 6 |
epidermal cell | 6.04e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 1.61e-14 | 1 |
cranial nerve | 1.61e-14 | 1 |
nerve trunk | 1.61e-14 | 1 |
nerve connecting eye with brain | 1.61e-14 | 1 |
nerve | 1.61e-14 | 1 |
retinal neural layer | 1.61e-14 | 1 |
presumptive neural retina | 1.61e-14 | 1 |
neural tissue | 6.58e-08 | 2 |
multi cell component structure | 6.58e-08 | 2 |
neuron projection bundle | 6.58e-08 | 2 |
peripheral nervous system | 7.21e-07 | 8 |