FFCP PHASE1:Hg19::chr1:160643338..160643361,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=202bp_to_ENST00000443928_5end | |association_with_transcript=202bp_to_ENST00000443928_5end | ||
|cluster_id=chr1:160643338..160643361,+ | |||
|coexpression_cluster_id=C21 | |coexpression_cluster_id=C21 | ||
|description=CAGE_peak_1_at_ENST00000443928_5end | |description=CAGE_peak_1_at_ENST00000443928_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000080!3.61e-12!6;CL:0000838!1.22e-07!52;CL:0000542!1.86e-07!53;CL:0000051!1.86e-07!53 | |ontology_enrichment_celltype=CL:0000080!3.61e-12!6;CL:0000838!1.22e-07!52;CL:0000542!1.86e-07!53;CL:0000051!1.86e-07!53 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006965;2.57e-08;2 | |ontology_enrichment_development_v019=UBERON:0006965;2.57e-08;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060060;1.34e-15;1!DOID:0060061;1.34e-15;1!DOID:8691;1.34e-15;1 | |ontology_enrichment_disease_v019=DOID:0060060;1.34e-15;1!DOID:0060061;1.34e-15;1!DOID:8691;1.34e-15;1 | ||
|ontology_enrichment_disease_v019_2=DOID:0060060,1.34e-15,1;DOID:0060061,1.34e-15,1;DOID:8691,1.34e-15,1 | |||
|ontology_enrichment_uberon=UBERON:0003408!6.49e-11!10;UBERON:0004177!3.08e-10!7;UBERON:0000341!1.12e-09!2;UBERON:0001829!1.17e-09!2;UBERON:0000974!2.58e-07!10;UBERON:0001044!5.26e-07!6;UBERON:0003293!5.26e-07!6;UBERON:0003294!5.26e-07!6;UBERON:0010047!5.26e-07!6;UBERON:0000167!5.26e-07!6 | |ontology_enrichment_uberon=UBERON:0003408!6.49e-11!10;UBERON:0004177!3.08e-10!7;UBERON:0000341!1.12e-09!2;UBERON:0001829!1.17e-09!2;UBERON:0000974!2.58e-07!10;UBERON:0001044!5.26e-07!6;UBERON:0003293!5.26e-07!6;UBERON:0003294!5.26e-07!6;UBERON:0010047!5.26e-07!6;UBERON:0000167!5.26e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.08e-29;2!UBERON:0005058;1.08e-29;2!UBERON:0009113;1.08e-29;2!UBERON:0002331;1.02e-13;10!UBERON:0004177;1.69e-12;5!UBERON:0005057;1.69e-12;5!UBERON:0002390;4.79e-10;32!UBERON:0000178;2.45e-09;15!UBERON:0000179;2.45e-09;15!UBERON:0000463;2.45e-09;15 | |ontology_enrichment_uberon_v019=UBERON:0002370;1.08e-29;2!UBERON:0005058;1.08e-29;2!UBERON:0009113;1.08e-29;2!UBERON:0002331;1.02e-13;10!UBERON:0004177;1.69e-12;5!UBERON:0005057;1.69e-12;5!UBERON:0002390;4.79e-10;32!UBERON:0000178;2.45e-09;15!UBERON:0000179;2.45e-09;15!UBERON:0000463;2.45e-09;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.07e-15,4;UBERON:0005058,2.07e-15,4;UBERON:0009113,2.07e-15,4;UBERON:0003295,2.07e-15,4;UBERON:0005562,2.07e-15,4;UBERON:0002331,1.05e-13,10;UBERON:0000358,1.05e-13,10;UBERON:0000307,1.05e-13,10;UBERON:0000091,1.05e-13,10;UBERON:0000087,1.05e-13,10;UBERON:0007010,1.05e-13,10;UBERON:0007806,1.05e-13,10;UBERON:0008780,1.05e-13,10;UBERON:0005728,1.05e-13,10;UBERON:0003351,1.36e-10,6;UBERON:0000178,2.49e-09,15;UBERON:0000179,2.49e-09,15;UBERON:0000463,2.49e-09,15;UBERON:0004177,3.30e-09,7;UBERON:0005057,3.30e-09,7 | |||
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| ||
|short_description=p1@ENST00000443928 | |short_description=p1@ENST00000443928 | ||
}} | }} |
Latest revision as of 23:23, 27 July 2015
Short description: | p1@ENST00000443928 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000443928_5end |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | 202bp_to_ENST00000443928_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 2.07e-15 | 4 |
hemolymphoid system gland | 2.07e-15 | 4 |
thymic region | 2.07e-15 | 4 |
pharyngeal gland | 2.07e-15 | 4 |
thymus primordium | 2.07e-15 | 4 |
umbilical cord | 1.05e-13 | 10 |
blastocyst | 1.05e-13 | 10 |
blastula | 1.05e-13 | 10 |
bilaminar disc | 1.05e-13 | 10 |
inner cell mass | 1.05e-13 | 10 |
cleaving embryo | 1.05e-13 | 10 |
connecting stalk | 1.05e-13 | 10 |
inner cell mass derived epiblast | 1.05e-13 | 10 |
extraembryonic mesoderm | 1.05e-13 | 10 |
pharyngeal epithelium | 1.36e-10 | 6 |
blood | 2.49e-09 | 15 |
haemolymphatic fluid | 2.49e-09 | 15 |
organism substance | 2.49e-09 | 15 |
hemopoietic organ | 3.30e-09 | 7 |
immune organ | 3.30e-09 | 7 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 1.34e-15 | 1 |
cutaneous T cell lymphoma | 1.34e-15 | 1 |
mycosis fungoides | 1.34e-15 | 1 |