FFCP PHASE1:Hg19::chr1:163429080..163429090,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:163429080..163429090,- | |||
|coexpression_cluster_id=C390 | |coexpression_cluster_id=C390 | ||
|description=CAGE_peak_at_chr1:163429080..163429090,- | |description=CAGE_peak_at_chr1:163429080..163429090,- | ||
|id=chr1:163429080..163429090,- | |id=chr1:163429080..163429090,- | ||
|ontology_enrichment_celltype=CL:0000047!1.14e-08!8;CL:0000540!5.18e-07!6;CL:0000031!5.18e-07!6;CL:0000404!5.18e-07!6 | |ontology_enrichment_celltype=CL:0000047!1.14e-08!8;CL:0000540!5.18e-07!6;CL:0000031!5.18e-07!6;CL:0000404!5.18e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000540;5.89e-20;6!CL:0000404;5.89e-20;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,5.89e-20,6;CL:0000031,5.89e-20,6;CL:0000404,5.89e-20,6;CL:0000047,3.06e-15,8 | |||
|ontology_enrichment_development_v019=UBERON:0005425;9.99e-30;1!CL:0000031;5.89e-20;6!UBERON:0003056;7.42e-11;3!UBERON:0005062;2.11e-08;4!UBERON:0007284;2.11e-08;4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003978!9.88e-07!3;UBERON:0009751!9.88e-07!3;UBERON:0000946!9.88e-07!3;UBERON:0002523!9.88e-07!3;UBERON:0005983!9.88e-07!3;UBERON:0002165!9.88e-07!3;UBERON:0002062!9.88e-07!3;UBERON:0007280!9.88e-07!3 | |ontology_enrichment_uberon=UBERON:0003978!9.88e-07!3;UBERON:0009751!9.88e-07!3;UBERON:0000946!9.88e-07!3;UBERON:0002523!9.88e-07!3;UBERON:0005983!9.88e-07!3;UBERON:0002165!9.88e-07!3;UBERON:0002062!9.88e-07!3;UBERON:0007280!9.88e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0000941;9.99e-30;1!UBERON:0001785;9.99e-30;1!UBERON:0002464;9.99e-30;1!UBERON:0004904;9.99e-30;1!UBERON:0001021;9.99e-30;1!UBERON:0002134;1.78e-29;1!UBERON:0005208;1.78e-29;1!UBERON:0004145;1.78e-29;1!UBERON:0005946;1.78e-29;1!UBERON:0005965;1.78e-29;1!UBERON:0002078;1.78e-29;1!UBERON:0003714;1.33e-15;2!UBERON:0005162;1.33e-15;2!UBERON:0000122;1.33e-15;2!UBERON:0002081;1.78e-15;2!UBERON:0002133;1.78e-15;2!UBERON:0003978;8.99e-11;3!UBERON:0004151;8.99e-11;3!UBERON:0000946;8.99e-11;3!UBERON:0000945;6.58e-07;5!UBERON:0010039;6.58e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,9.99e-30,1;UBERON:0001785,9.99e-30,1;UBERON:0002464,9.99e-30,1;UBERON:0004904,9.99e-30,1;UBERON:0001021,9.99e-30,1;UBERON:0003902,9.99e-30,1;UBERON:0005425,9.99e-30,1;UBERON:0002134,2.37e-29,1;UBERON:0005208,2.37e-29,1;UBERON:0005946,2.37e-29,1;UBERON:0005965,2.37e-29,1;UBERON:0002078,2.37e-29,1;UBERON:0003714,1.33e-15,2;UBERON:0005162,1.33e-15,2;UBERON:0000122,1.33e-15,2;UBERON:0002081,2.05e-15,2;UBERON:0002133,2.05e-15,2;UBERON:0010227,2.05e-15,2;UBERON:0003978,9.90e-11,3;UBERON:0009751,9.90e-11,3;UBERON:0004151,9.90e-11,3;UBERON:0000946,9.90e-11,3;UBERON:0002523,9.90e-11,3;UBERON:0005983,9.90e-11,3;UBERON:0004145,9.90e-11,3;UBERON:0002165,9.90e-11,3;UBERON:0002062,9.90e-11,3;UBERON:0007280,9.90e-11,3;UBERON:0001781,1.82e-08,4 | |||
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|short_description=p@chr1:163429080..163429090,- | |short_description=p@chr1:163429080..163429090,- | ||
}} | }} |
Latest revision as of 23:49, 27 July 2015
Short description: | p@chr1:163429080..163429090, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:163429080..163429090, - |
Coexpression cluster: | C390_Neurons_Synoviocyte_optic_Neural_heart_umbilical_CD14 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 5.89e-20 | 6 |
neuroblast | 5.89e-20 | 6 |
electrically signaling cell | 5.89e-20 | 6 |
neuronal stem cell | 3.06e-15 | 8 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 9.99e-30 | 1 |
cranial nerve | 9.99e-30 | 1 |
nerve trunk | 9.99e-30 | 1 |
nerve connecting eye with brain | 9.99e-30 | 1 |
nerve | 9.99e-30 | 1 |
retinal neural layer | 9.99e-30 | 1 |
presumptive neural retina | 9.99e-30 | 1 |
tricuspid valve | 2.37e-29 | 1 |
right atrium valve | 2.37e-29 | 1 |
outflow tract of atrium | 2.37e-29 | 1 |
outflow part of right atrium | 2.37e-29 | 1 |
right cardiac atrium | 2.37e-29 | 1 |
neural tissue | 1.33e-15 | 2 |
multi cell component structure | 1.33e-15 | 2 |
neuron projection bundle | 1.33e-15 | 2 |
cardiac atrium | 2.05e-15 | 2 |
atrioventricular valve | 2.05e-15 | 2 |
future cardiac atrium | 2.05e-15 | 2 |
valve | 9.90e-11 | 3 |
cardiac mesenchyme | 9.90e-11 | 3 |
cardiac chamber | 9.90e-11 | 3 |
cardial valve | 9.90e-11 | 3 |
tunica intima | 9.90e-11 | 3 |
heart layer | 9.90e-11 | 3 |
outflow tract | 9.90e-11 | 3 |
endocardium | 9.90e-11 | 3 |
endocardial cushion | 9.90e-11 | 3 |
presumptive endocardium | 9.90e-11 | 3 |
layer of retina | 1.82e-08 | 4 |