FFCP PHASE1:Hg19::chr1:165820189..165820195,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:165820189..165820195,+ | |||
|description=CAGE_peak_at_chr1:165820189..165820195,+ | |description=CAGE_peak_at_chr1:165820189..165820195,+ | ||
|id=chr1:165820189..165820195,+ | |id=chr1:165820189..165820195,+ | ||
|ontology_enrichment_celltype=CL:0000785;1.74e-07;1!CL:0000819;1.74e-07;1!CL:0002553;4.68e-07;1 | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019=CL:0000785;1.74e-07;1!CL:0000819;1.74e-07;1!CL:0002553;4.68e-07;1 | ||
|ontology_enrichment_disease=DOID:5409;7.70e-14;4!DOID:1325;4.15e-08;7!DOID:3904;4.15e-08;7!DOID:0060073;1.74e-07;1!DOID:8675;1.74e-07;1!DOID:225;4.68e-07;1 | |ontology_enrichment_celltype_v019_2=CL:0000819,1.86e-07,1;CL:0002553,2.52e-07,1 | ||
|ontology_enrichment_uberon=UBERON:0002079;4.68e-07;1!UBERON:0000941;4.68e-07;1!UBERON:0001785;4.68e-07;1!UBERON:0002464;4.68e-07;1!UBERON:0004904;4.68e-07;1!UBERON:0001021;4.68e-07;1 | |ontology_enrichment_development_v019=UBERON:0003056;7.30e-09;3!UBERON:0010227;4.68e-07;1!UBERON:0005425;4.68e-07;1 | ||
|ontology_enrichment_disease=DOID:162!8.29e-19!235;DOID:14566!8.78e-19!239;DOID:0050687!6.31e-12!143;DOID:305!1.87e-10!106;DOID:0050686!5.81e-10!137 | |||
|ontology_enrichment_disease_v019=DOID:5409;7.70e-14;4!DOID:1325;4.15e-08;7!DOID:3904;4.15e-08;7!DOID:0060073;1.74e-07;1!DOID:8675;1.74e-07;1!DOID:225;4.68e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,1.03e-13,4;DOID:1325,4.88e-08,7;DOID:3904,4.88e-08,7;DOID:0060073,1.86e-07,1;DOID:8675,1.86e-07,1;DOID:0050686,2.17e-07,137;DOID:162,3.27e-07,235;DOID:225,5.45e-07,1;DOID:14566,5.71e-07,239 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002079;4.68e-07;1!UBERON:0000941;4.68e-07;1!UBERON:0001785;4.68e-07;1!UBERON:0002464;4.68e-07;1!UBERON:0004904;4.68e-07;1!UBERON:0001021;4.68e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002079,3.20e-07,1;UBERON:0000941,3.40e-07,1;UBERON:0001785,3.40e-07,1;UBERON:0002464,3.40e-07,1;UBERON:0004904,3.40e-07,1;UBERON:0001021,3.40e-07,1;UBERON:0003902,3.40e-07,1;UBERON:0005425,3.40e-07,1 | |||
|phase1_expression=0.181678379270557,0,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.251085279189606,0.458480434487708,0.410502947249729,0.472264687882075,0,0.383829398097213,0,0,0,0,0.154934401160603,0.710846162437108,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0.211255286311942,0,0,0,0.150176892841506,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0.382273228125229,0,0.560508562981536,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0.384273959177026,0.650296737799391,0.328875809207352,0.552700035571697,0,0.14828656316206,0,0,0.113309342697566,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0.267440195783507,0.144824403882799,0,0,0,0,0,0.144846518960824,0.795285947051099,0.486634870302636,0.189069634328136,0,0.790513071238134,0.196468613246569,0.364295288292542,0,0,0,0.132957960518865,0.238490624305342,0.571994910780128,0.371457501329565,0,0.860234595106124,0.347140501607594,0,0,0,0,0.775250277507987,1.42306505074684,0,0,0,0,0,0,0.357198913136319,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0.134710672069688,0.163461903113459,0,0,0,0,0.570471821544449,0,0.23486899728753,0.161872944368132,0.140450806702248,0,0.122834317311768,0.206651562351531,0,0,0,0,0.505008341862199,0.500474079487857,0.277064115484183,0.438977620880838,0,0.150238058906597,0,0.179389635688862,0,0.211931901159562,0,0,0.257640540045629,0,0.675105328965065,0,0,0.276149695926898,0,0,0,0,0,0,0,0.121973706129595,0,0,0.207322110030741,0,0.36497735907583,0,0,0,0,0,0.118306800039844,0.168584690078102,0.241011029883482,0.110293972732394,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0.441463099414651,0.491953754172454,0,0,0,0,0.0925884451585296,0.325808305310325,0,1.44331342025273,0.115930404975077,0,0,0.462985512576611,0.190254152234598,0,0,0,0,0.297262324577456,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0,0.063497894292169,0,0,0,0,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0.285955987316295,0,0.823240336780769,0,0,0,0,0,0,0,0,0,0,1.14861935834114,0,0,1.02738161275192,0.537182889719687,0.224170287987055,0,0.862510299438069,0.256686072559497,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0.173767228936166,0,0,0.206768026122887,0.215714200818617,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0.154209693802656,0,0.164254312027618,0,0,0.241718899183244,0,0.276242966807689,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.103041011647722,0.0915694648183434,0.742585499285292,0,0,0,0,0.154048617114644,0,0.413509717453592,0,0.435050081742686,0.170453254832202,0,0,0.384380134730212,0.638063562472921,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0.202910376962704,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0.427296284509893,0,0.245040215981032,0.185803175125719,0,0.213425530045242,0,0.399158742865633,0.191505370132367,0.846694330895531,0,1.12318871245384,3.19528550646469,0.313359791546046,0,0.169291777801603,0.642352300414798,0.201799707191048,0.425846237690326,0,0.614481528616916,0.671028323677248,0.667396566847634,0.19538809540204,0,1.23087398947712,0,0.33307196799782,0,0.18714054040822,0.293016358543788,0,0.891547074219827,0.284136146806413,0,0,0,1.9882952955326,0.140669416410513,0.222617410045812,1.31843099381408,1.26675244876796,0,0,0.251932747854276,0.102268682502155,0.246169610922139,0,0.539210106883961,1.9692329214317,0,0.0986434056369336,0,0,0.969332746095218,0,0,0,0.262379999988587,0,0.796554137998498,0,0.472775363535873,1.37897349296586,0.291604613383254,0.173624994933292,0,0.482385754501632,0,0.663475559587348,0.295547618953547,0.219385397153973,0.10893846351899,0,0.0769502585037971,0,0.46112780877612,0.179515288819544,0.217294743844016,0,0,0,0,0.156980256395025,0.498635045700469,0.225595660617181,0,0.503464760927528,0.75901493089674,1.27149263184303,0.843992258112108,0.163232808159148,0.141353071433941,1.29833183845255,0,0.265372693510018,0.611030144933625,1.18608451472249,0.494255755786011,0.417687798021821,0.202203398942031,0,0,2.00700268137233,0.19566461893209,0.485560759068186,0,0,1.53036380815245,0.189559738885464,0,0.207376382794494,0,0.330991955875499,0.627865836814451,2.38944859545918,0.569219092059585,0.138674673013139,0,0.391969589657511,0.522355239482415,0.34945333648406,0.343972064943233,0.677294319023596,0.365446585430928,0.656923656425674,0.193978032976839,0.441280633457501,0.225980740780532,0.274083849293502,0.19871461170299,0.0633107959558787,0.782205530939212,0.240476460754601,0.213452994739353,0.19980960958213,0.432271251462318,0.572682980829578,1.02956998717179,0.14405479798815,0.248505071130865,0,0.135904206073614,0.104602846312333,0.101998217636322,0.288950589901519,0,0.410716136675979,0,0,0,0.837847203816763,0.687481272035051,0,0,0.429226048136571,0,0.268733889946905,0,0,0.472699093843342,0.0824158583811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| ||
|short_description=p@chr1:165820189..165820195,+ | |short_description=p@chr1:165820189..165820195,+ | ||
}} | }} |
Latest revision as of 23:57, 27 July 2015
Short description: | p@chr1:165820189..165820195, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:165820189..165820195, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B-1 B cell | 1.86e-07 | 1 |
lung fibroblast | 2.52e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
left cardiac atrium | 3.20e-07 | 1 |
cranial nerve II | 3.40e-07 | 1 |
cranial nerve | 3.40e-07 | 1 |
nerve trunk | 3.40e-07 | 1 |
nerve connecting eye with brain | 3.40e-07 | 1 |
nerve | 3.40e-07 | 1 |
retinal neural layer | 3.40e-07 | 1 |
presumptive neural retina | 3.40e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 1.03e-13 | 4 |
bronchus cancer | 4.88e-08 | 7 |
bronchogenic carcinoma | 4.88e-08 | 7 |
lymphatic system cancer | 1.86e-07 | 1 |
lymphosarcoma | 1.86e-07 | 1 |
organ system cancer | 2.17e-07 | 137 |
cancer | 3.27e-07 | 235 |
syndrome | 5.45e-07 | 1 |
disease of cellular proliferation | 5.71e-07 | 239 |