FFCP PHASE1:Hg19::chr1:22264210..22264241,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:22264210..22264241,+ | |||
|coexpression_cluster_id=C1203 | |coexpression_cluster_id=C1203 | ||
|description=CAGE_peak_at_chr1:22264210..22264241,+ | |description=CAGE_peak_at_chr1:22264210..22264241,+ | ||
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|ontology_enrichment_celltype=CL:0002139!1.92e-26!24;CL:0000115!2.40e-24!35;CL:0000071!5.31e-20!18;CL:0002546!5.31e-20!18;CL:0002078!2.03e-18!44;CL:0000213!1.48e-14!57;CL:0000215!1.48e-14!57;CL:1000413!3.09e-12!9;CL:0000222!3.94e-12!119;CL:0002543!7.44e-09!6;CL:0002544!8.65e-09!6;CL:0005020!5.46e-08!6;CL:0002138!5.46e-08!6;CL:0005022!5.46e-08!6;CL:0002321!3.83e-07!248 | |ontology_enrichment_celltype=CL:0002139!1.92e-26!24;CL:0000115!2.40e-24!35;CL:0000071!5.31e-20!18;CL:0002546!5.31e-20!18;CL:0002078!2.03e-18!44;CL:0000213!1.48e-14!57;CL:0000215!1.48e-14!57;CL:1000413!3.09e-12!9;CL:0000222!3.94e-12!119;CL:0002543!7.44e-09!6;CL:0002544!8.65e-09!6;CL:0005020!5.46e-08!6;CL:0002138!5.46e-08!6;CL:0005022!5.46e-08!6;CL:0002321!3.83e-07!248 | ||
|ontology_enrichment_celltype_v019=CL:0000071;8.51e-95;18!CL:0002139;2.34e-90;24!CL:0000115;1.94e-68;36!CL:1000413;1.35e-54;9!CL:0002544;1.13e-46;6!CL:0002543;2.29e-46;6!CL:0002078;3.28e-39;45!CL:0000213;3.95e-35;58!CL:0000215;3.95e-35;58!CL:0002618;2.16e-23;3!CL:0002262;1.27e-16;2!CL:1000398;1.27e-16;2!CL:0000076;2.33e-16;63!CL:0002545;2.66e-16;2 | |ontology_enrichment_celltype_v019=CL:0000071;8.51e-95;18!CL:0002139;2.34e-90;24!CL:0000115;1.94e-68;36!CL:1000413;1.35e-54;9!CL:0002544;1.13e-46;6!CL:0002543;2.29e-46;6!CL:0002078;3.28e-39;45!CL:0000213;3.95e-35;58!CL:0000215;3.95e-35;58!CL:0002618;2.16e-23;3!CL:0002262;1.27e-16;2!CL:1000398;1.27e-16;2!CL:0000076;2.33e-16;63!CL:0002545;2.66e-16;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000071,6.81e-95,18;CL:0002546,6.81e-95,18;CL:0002139,2.05e-90,24;CL:0000115,1.25e-82,36;CL:0002078,1.95e-65,45;CL:1000413,2.45e-54,9;CL:0000213,5.18e-50,58;CL:0000215,5.18e-50,58;CL:0002543,8.60e-47,6;CL:0002544,2.21e-46,6;CL:0000076,3.33e-25,63;CL:0002618,9.24e-24,3;CL:0000222,3.75e-22,121;CL:0002262,1.00e-16,2;CL:1000398,1.00e-16,2;CL:0002545,4.40e-16,2;CL:0002321,7.14e-10,250;CL:0000066,8.09e-10,253 | |||
|ontology_enrichment_development_v019=CL:0002546;8.51e-95;18!CL:0000222;3.32e-11;121!UBERON:0010227;7.55e-09;1 | |ontology_enrichment_development_v019=CL:0002546;8.51e-95;18!CL:0000222;3.32e-11;121!UBERON:0010227;7.55e-09;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0004638;8.51e-95;18!UBERON:0001986;8.51e-95;18!UBERON:0004852;8.51e-95;18!UBERON:0000487;4.27e-77;22!UBERON:0006914;1.56e-67;25!UBERON:0003915;1.35e-54;9!UBERON:0004700;1.35e-54;9!UBERON:0001917;1.35e-54;9!UBERON:0000490;1.45e-46;33!UBERON:0001638;8.37e-31;9!UBERON:0003920;8.37e-31;9!UBERON:0004582;8.37e-31;9!UBERON:0007500;1.98e-22;56!UBERON:0001981;1.98e-22;56!UBERON:0004537;1.98e-22;56!UBERON:0000055;4.14e-19;65!UBERON:0001281;1.27e-16;2!UBERON:0003497;1.27e-16;2!UBERON:0003909;1.27e-16;2!UBERON:0003835;1.27e-16;2!UBERON:0005800;2.66e-16;2!UBERON:0001515;2.66e-16;2!UBERON:0003914;6.21e-15;74!UBERON:0002066;2.77e-14;5!UBERON:0000947;4.89e-13;21!UBERON:0010191;4.89e-13;21!UBERON:0001009;1.04e-12;112!UBERON:0002049;3.39e-12;75!UBERON:0007798;3.39e-12;75!UBERON:0000025;5.17e-12;93!UBERON:0001280;2.15e-11;3!UBERON:0004647;2.15e-11;3!UBERON:0001637;1.26e-10;42!UBERON:0003509;1.26e-10;42!UBERON:0004572;1.26e-10;42!UBERON:0004535;7.45e-10;109!UBERON:0002079;7.55e-09;1!UBERON:0004573;1.87e-08;33!UBERON:0004571;1.87e-08;33!UBERON:0010260;3.64e-08;9!UBERON:0004111;2.19e-07;130!UBERON:0000119;6.61e-07;139!UBERON:0000483;9.53e-07;136 | |ontology_enrichment_uberon_v019=UBERON:0004638;8.51e-95;18!UBERON:0001986;8.51e-95;18!UBERON:0004852;8.51e-95;18!UBERON:0000487;4.27e-77;22!UBERON:0006914;1.56e-67;25!UBERON:0003915;1.35e-54;9!UBERON:0004700;1.35e-54;9!UBERON:0001917;1.35e-54;9!UBERON:0000490;1.45e-46;33!UBERON:0001638;8.37e-31;9!UBERON:0003920;8.37e-31;9!UBERON:0004582;8.37e-31;9!UBERON:0007500;1.98e-22;56!UBERON:0001981;1.98e-22;56!UBERON:0004537;1.98e-22;56!UBERON:0000055;4.14e-19;65!UBERON:0001281;1.27e-16;2!UBERON:0003497;1.27e-16;2!UBERON:0003909;1.27e-16;2!UBERON:0003835;1.27e-16;2!UBERON:0005800;2.66e-16;2!UBERON:0001515;2.66e-16;2!UBERON:0003914;6.21e-15;74!UBERON:0002066;2.77e-14;5!UBERON:0000947;4.89e-13;21!UBERON:0010191;4.89e-13;21!UBERON:0001009;1.04e-12;112!UBERON:0002049;3.39e-12;75!UBERON:0007798;3.39e-12;75!UBERON:0000025;5.17e-12;93!UBERON:0001280;2.15e-11;3!UBERON:0004647;2.15e-11;3!UBERON:0001637;1.26e-10;42!UBERON:0003509;1.26e-10;42!UBERON:0004572;1.26e-10;42!UBERON:0004535;7.45e-10;109!UBERON:0002079;7.55e-09;1!UBERON:0004573;1.87e-08;33!UBERON:0004571;1.87e-08;33!UBERON:0010260;3.64e-08;9!UBERON:0004111;2.19e-07;130!UBERON:0000119;6.61e-07;139!UBERON:0000483;9.53e-07;136 | ||
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|short_description=p@chr1:22264210..22264241,+ | |short_description=p@chr1:22264210..22264241,+ | ||
}} | }} |
Latest revision as of 04:14, 28 July 2015
Short description: | p@chr1:22264210..22264241, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:22264210..22264241, + |
Coexpression cluster: | C1203_Endothelial_placenta_choriocarcinoma_Renal_Hair_Fibroblast_Myoblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood vessel endothelial cell | 6.81e-95 | 18 |
embryonic blood vessel endothelial progenitor cell | 6.81e-95 | 18 |
endothelial cell of vascular tree | 2.05e-90 | 24 |
endothelial cell | 1.25e-82 | 36 |
meso-epithelial cell | 1.95e-65 | 45 |
endothelial cell of artery | 2.45e-54 | 9 |
lining cell | 5.18e-50 | 58 |
barrier cell | 5.18e-50 | 58 |
vein endothelial cell | 8.60e-47 | 6 |
aortic endothelial cell | 2.21e-46 | 6 |
squamous epithelial cell | 3.33e-25 | 63 |
endothelial cell of umbilical vein | 9.24e-24 | 3 |
mesodermal cell | 3.75e-22 | 121 |
endothelial cell of sinusoid | 1.00e-16 | 2 |
endothelial cell of hepatic sinusoid | 1.00e-16 | 2 |
thoracic aorta endothelial cell | 4.40e-16 | 2 |
embryonic cell | 7.14e-10 | 250 |
epithelial cell | 8.09e-10 | 253 |