FFCP PHASE1:Hg19::chr1:22974497..22974515,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:22974497..22974515,+ | |||
|coexpression_cluster_id=C67 | |||
|description=CAGE_peak_at_chr1:22974497..22974515,+ | |||
|id=chr1:22974497..22974515,+ | |||
|ontology_enrichment_celltype=CL:0002619!5.70e-10!3;CL:0000840!6.53e-08!5;CL:0001029!6.53e-08!5;CL:0000990!1.51e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0002619;8.78e-67;3!CL:0000840;1.09e-15;5!CL:0000235;1.31e-15;6!CL:0000990;8.57e-11;8!CL:0000451;5.31e-09;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002619,7.85e-67,3;CL:0002194,6.22e-18,59;CL:0000576,6.22e-18,59;CL:0000040,6.22e-18,59;CL:0000559,6.22e-18,59;CL:0002009,2.36e-17,61;CL:0000839,4.71e-16,66;CL:0000557,8.12e-16,67;CL:0000840,9.74e-16,5;CL:0001029,9.74e-16,5;CL:0000235,1.41e-15,6;CL:0000766,9.95e-15,72;CL:0000990,7.96e-11,8;CL:0000763,8.08e-10,108;CL:0000049,8.08e-10,108;CL:0002087,3.25e-09,115;CL:0000451,5.00e-09,10;CL:0002031,7.96e-09,120;CL:0000738,9.09e-08,136 | |||
|ontology_enrichment_development_v019=UBERON:0001045;4.59e-23;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.05e-46!115;UBERON:0001049!2.98e-19!57;UBERON:0005068!2.98e-19!57;UBERON:0006241!2.98e-19!57;UBERON:0007135!2.98e-19!57;UBERON:0001017!9.75e-14!82;UBERON:0002616!2.09e-13!59;UBERON:0003075!3.68e-13!86;UBERON:0007284!3.68e-13!86;UBERON:0002308!4.06e-13!9;UBERON:0000125!4.06e-13!9;UBERON:0005743!8.21e-13!86;UBERON:0002346!2.72e-12!90;UBERON:0002780!1.14e-11!41;UBERON:0001890!1.14e-11!41;UBERON:0006240!1.14e-11!41;UBERON:0002298!1.91e-11!8;UBERON:0003080!2.63e-11!42;UBERON:0000073!5.07e-11!94;UBERON:0001016!5.07e-11!94;UBERON:0002020!6.82e-11!34;UBERON:0003528!6.82e-11!34;UBERON:0000955!1.61e-10!69;UBERON:0006238!1.61e-10!69;UBERON:0003076!4.79e-10!15;UBERON:0003057!4.79e-10!15;UBERON:0002420!9.56e-10!9;UBERON:0007245!9.56e-10!9;UBERON:0010009!9.56e-10!9;UBERON:0010011!9.56e-10!9;UBERON:0000454!9.56e-10!9;UBERON:0002791!1.71e-09!33;UBERON:0001893!3.84e-09!34;UBERON:0000062!4.11e-09!511;UBERON:0009663!6.69e-09!7;UBERON:0002240!1.01e-08!3;UBERON:0006331!1.09e-08!3;UBERON:0001896!1.66e-08!3;UBERON:0005290!1.66e-08!3;UBERON:0010096!1.66e-08!3;UBERON:0000025!2.07e-07!194;UBERON:0001869!6.78e-07!32;UBERON:0002081!7.47e-07!2;UBERON:0003056!9.96e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0001154;4.59e-23;1!UBERON:0001153;4.59e-23;1!UBERON:0009854;4.59e-23;1!UBERON:0001155;1.12e-10;9!UBERON:0000059;6.61e-09;11!UBERON:0009856;9.36e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,6.40e-23,1;UBERON:0001153,6.40e-23,1;UBERON:0001045,6.40e-23,1;UBERON:0002371,5.86e-14,76;UBERON:0001474,6.09e-13,82;UBERON:0004765,8.58e-12,90;UBERON:0002405,2.06e-11,93;UBERON:0002390,7.91e-11,98;UBERON:0003061,7.91e-11,98;UBERON:0001155,1.18e-10,9;UBERON:0001434,1.31e-10,100;UBERON:0002193,8.08e-10,108;UBERON:0000059,6.88e-09,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.9718582377563,3.2389366601898,4.37878464978117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9472843619281,5.74628133087582,0.664789802594326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.20082107913617,0,0.445893486866185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50677127429638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0.19924798825107,1.10513566212459,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.796118080530053,1.83309043480088,0,0,0,0.067401132980677,0,0.468528891450678,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0.52418000472609,0,0,0,0,0.387956065953678,0,0.225980740780532,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0.717873024576814,0,0,0.669514372325618,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0.0607495566580247,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.39669780522807,0,0,0.320362237703084,0,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0.443716206147409,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0.132864840313363,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.319267718114302,0.41023272848151,0,0,0.322951291263702,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0.606965604236632,0,0.266107110487916,0,0,0,0.0657727735628491,0,0,0.156986185701028,0.314231179832004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.385870790539723,0.218559560503957,0,0,0,0.196308467114945,0.594092800654172,0.4226557275834,0,0.939839179798536,0.0644578879735772,0,0,0,0,0,0,0.430018749454354,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.303114792872958,0,0,0.620597975171371,0.852935927603924,0.23806443146374,0,0,0,0.0636471582781649,0.202117188958219,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p@chr1:22974497..22974515,+ | |||
}} |
Latest revision as of 04:54, 28 July 2015
Short description: | p@chr1:22974497..22974515, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:22974497..22974515, + |
Coexpression cluster: | C67_CD14_Monocytederived_Macrophage_dura_Dendritic_spleen_lung |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult endothelial progenitor cell | 7.85e-67 | 3 |
monopoietic cell | 6.22e-18 | 59 |
monocyte | 6.22e-18 | 59 |
monoblast | 6.22e-18 | 59 |
promonocyte | 6.22e-18 | 59 |
macrophage dendritic cell progenitor | 2.36e-17 | 61 |
myeloid lineage restricted progenitor cell | 4.71e-16 | 66 |
granulocyte monocyte progenitor cell | 8.12e-16 | 67 |
immature conventional dendritic cell | 9.74e-16 | 5 |
common dendritic progenitor | 9.74e-16 | 5 |
macrophage | 1.41e-15 | 6 |
myeloid leukocyte | 9.95e-15 | 72 |
conventional dendritic cell | 7.96e-11 | 8 |
myeloid cell | 8.08e-10 | 108 |
common myeloid progenitor | 8.08e-10 | 108 |
nongranular leukocyte | 3.25e-09 | 115 |
dendritic cell | 5.00e-09 | 10 |
hematopoietic lineage restricted progenitor cell | 7.96e-09 | 120 |
leukocyte | 9.09e-08 | 136 |
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 6.40e-23 | 1 |
caecum | 6.40e-23 | 1 |
midgut | 6.40e-23 | 1 |
bone marrow | 5.86e-14 | 76 |
bone element | 6.09e-13 | 82 |
skeletal element | 8.58e-12 | 90 |
immune system | 2.06e-11 | 93 |
hematopoietic system | 7.91e-11 | 98 |
blood island | 7.91e-11 | 98 |
colon | 1.18e-10 | 9 |
skeletal system | 1.31e-10 | 100 |
hemolymphoid system | 8.08e-10 | 108 |
large intestine | 6.88e-09 | 11 |