FFCP PHASE1:Hg19::chr1:240569692..240569715,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:240569692..240569715,+ | |||
|coexpression_cluster_id=C177 | |||
|description=CAGE_peak_at_chr1:240569692..240569715,+ | |description=CAGE_peak_at_chr1:240569692..240569715,+ | ||
|id=chr1:240569692..240569715,+ | |id=chr1:240569692..240569715,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000054;1.33e-09;2!CL:0000137;1.33e-09;2!CL:0000092;1.33e-09;2!CL:0002092;1.65e-07;10!CL:0002539;1.85e-07;10!CL:0002620;4.35e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000054,1.33e-09,2;CL:0000137,1.33e-09,2;CL:0000092,1.33e-09,2;CL:0002092,1.73e-07,10;CL:0002539,1.85e-07,10;CL:0002620,4.21e-07,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060085;7.37e-18;1!DOID:3165;7.37e-18;1!DOID:0060121;7.37e-18;1!DOID:2438;7.37e-18;1!DOID:4418;7.37e-18;1!DOID:1909;7.98e-10;2!DOID:3307;1.12e-09;2!DOID:200;1.33e-09;2!DOID:4305;1.33e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,7.37e-18,1;DOID:3165,7.37e-18,1;DOID:0060121,7.37e-18,1;DOID:2438,7.37e-18,1;DOID:4418,7.37e-18,1;DOID:1909,7.98e-10,2;DOID:3307,1.12e-09,2;DOID:200,1.33e-09,2;DOID:4305,1.33e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0002199!7.79e-07!45;UBERON:0002416!7.79e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0001282;3.16e-18;1!UBERON:0009842;3.16e-18;1!UBERON:0003704;3.16e-18;1!UBERON:0001171;3.16e-18;1!UBERON:0001172;3.16e-18;1!UBERON:0004237;1.85e-07;10!UBERON:0004695;1.85e-07;10!UBERON:0002111;1.85e-07;10!UBERON:0004178;1.85e-07;10!UBERON:0001280;6.14e-07;3!UBERON:0004647;6.14e-07;3!UBERON:0002097;7.05e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,3.16e-18,1;UBERON:0009842,3.16e-18,1;UBERON:0003704,3.16e-18,1;UBERON:0001171,3.16e-18,1;UBERON:0001172,3.16e-18,1;UBERON:0002097,3.27e-10,41;UBERON:0002199,4.20e-09,46;UBERON:0002416,4.20e-09,46;UBERON:0004237,1.85e-07,10;UBERON:0004695,1.85e-07,10;UBERON:0002111,1.85e-07,10;UBERON:0004178,1.85e-07,10;UBERON:0001280,6.14e-07,3;UBERON:0004647,6.14e-07,3;UBERON:0005171,6.14e-07,3 | |||
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|short_description=p@chr1:240569692..240569715,+ | |short_description=p@chr1:240569692..240569715,+ | ||
}} | }} |
Latest revision as of 05:40, 28 July 2015
Short description: | p@chr1:240569692..240569715, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:240569692..240569715, + |
Coexpression cluster: | C177_melanoma_Melanocyte_mesenchymal_retina_Mallassezderived_Gingival_squamous |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone matrix secreting cell | 1.33e-09 | 2 |
osteocyte | 1.33e-09 | 2 |
osteoclast | 1.33e-09 | 2 |
bone marrow cell | 1.73e-07 | 10 |
aortic smooth muscle cell | 1.85e-07 | 10 |
skin fibroblast | 4.21e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 3.16e-18 | 1 |
acinus | 3.16e-18 | 1 |
intrahepatic bile duct | 3.16e-18 | 1 |
portal lobule | 3.16e-18 | 1 |
hepatic acinus | 3.16e-18 | 1 |
skin of body | 3.27e-10 | 41 |
integument | 4.20e-09 | 46 |
integumental system | 4.20e-09 | 46 |
blood vessel smooth muscle | 1.85e-07 | 10 |
arterial system smooth muscle | 1.85e-07 | 10 |
artery smooth muscle tissue | 1.85e-07 | 10 |
aorta smooth muscle tissue | 1.85e-07 | 10 |
liver parenchyma | 6.14e-07 | 3 |
liver lobule | 6.14e-07 | 3 |
hepatic duct | 6.14e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 7.37e-18 | 1 |
skin benign neoplasm | 7.37e-18 | 1 |
integumentary system benign neoplasm | 7.37e-18 | 1 |
dermis tumor | 7.37e-18 | 1 |
cutaneous fibrous histiocytoma | 7.37e-18 | 1 |
melanoma | 7.98e-10 | 2 |
teratoma | 1.12e-09 | 2 |
giant cell tumor | 1.33e-09 | 2 |
bone giant cell tumor | 1.33e-09 | 2 |