FFCP PHASE1:Hg19::chr1:40846881..40846909,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:40846881..40846909,+ | |||
|coexpression_cluster_id=C61 | |||
|description=CAGE_peak_at_chr1:40846881..40846909,+ | |description=CAGE_peak_at_chr1:40846881..40846909,+ | ||
|id=chr1:40846881..40846909,+ | |id=chr1:40846881..40846909,+ | ||
|ontology_enrichment_celltype=CL:0000738!1.71e-28!140;CL:0002087!1.12e-26!119;CL:0002031!3.33e-25!124;CL:0000988!4.80e-25!182;CL:0000037!3.99e-23!172;CL:0000566!3.99e-23!172;CL:0002032!3.92e-22!165;CL:0000837!3.92e-22!165;CL:0000838!4.03e-16!52;CL:0000542!1.05e-15!53;CL:0000051!1.05e-15!53;CL:0000945!9.21e-13!24;CL:0000826!9.21e-13!24;CL:0000080!4.72e-11!6;CL:0002009!1.27e-10!65;CL:0000990!3.13e-10!8;CL:0002194!8.52e-10!63;CL:0000576!8.52e-10!63;CL:0000040!8.52e-10!63;CL:0000559!8.52e-10!63;CL:0000453!1.83e-09!5;CL:0000839!2.18e-09!70;CL:0000557!2.64e-09!71;CL:0002057!2.90e-09!42;CL:0000763!1.12e-08!112;CL:0000049!1.12e-08!112;CL:0000860!2.06e-08!45;CL:0000766!2.23e-08!76;CL:0000451!3.28e-08!10 | |ontology_enrichment_celltype=CL:0000738!1.71e-28!140;CL:0002087!1.12e-26!119;CL:0002031!3.33e-25!124;CL:0000988!4.80e-25!182;CL:0000037!3.99e-23!172;CL:0000566!3.99e-23!172;CL:0002032!3.92e-22!165;CL:0000837!3.92e-22!165;CL:0000838!4.03e-16!52;CL:0000542!1.05e-15!53;CL:0000051!1.05e-15!53;CL:0000945!9.21e-13!24;CL:0000826!9.21e-13!24;CL:0000080!4.72e-11!6;CL:0002009!1.27e-10!65;CL:0000990!3.13e-10!8;CL:0002194!8.52e-10!63;CL:0000576!8.52e-10!63;CL:0000040!8.52e-10!63;CL:0000559!8.52e-10!63;CL:0000453!1.83e-09!5;CL:0000839!2.18e-09!70;CL:0000557!2.64e-09!71;CL:0002057!2.90e-09!42;CL:0000763!1.12e-08!112;CL:0000049!1.12e-08!112;CL:0000860!2.06e-08!45;CL:0000766!2.23e-08!76;CL:0000451!3.28e-08!10 | ||
|ontology_enrichment_celltype_v019=CL:0000453;2.77e-43;5!CL:0000990;3.00e-24;8!CL:0000451;6.56e-20;10!CL:0000945;4.88e-09;24!CL:0000542;6.75e-08;53!CL:0001014;6.80e-08;2!CL:0001016;6.80e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,2.12e-43,5;CL:0000990,2.59e-24,8;CL:0000451,5.81e-20,10;CL:0000988,3.07e-15,177;CL:0000738,1.42e-12,136;CL:0000838,7.86e-12,52;CL:0000542,1.34e-11,53;CL:0000051,1.34e-11,53;CL:0002032,2.06e-10,161;CL:0000837,2.06e-10,161;CL:0000037,6.40e-10,168;CL:0000945,4.78e-09,24;CL:0000826,4.78e-09,24;CL:0001014,5.74e-08,2;CL:0001016,5.74e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000051;6.75e-08;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060060;1.72e-14;1!DOID:0060061;1.72e-14;1!DOID:8691;1.72e-14;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,1.41e-14,1;DOID:0060061,1.41e-14,1;DOID:8691,1.41e-14,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.49e-15!102;UBERON:0003061!1.49e-15!102;UBERON:0002193!1.66e-14!112;UBERON:0002405!8.73e-09!115;UBERON:0002371!1.08e-08!80;UBERON:0004177!2.44e-08!7;UBERON:0001474!9.83e-08!86;UBERON:0002106!1.37e-07!3;UBERON:0004854!1.37e-07!3;UBERON:0009034!1.37e-07!3;UBERON:0002095!1.37e-07!3;UBERON:0004782!1.37e-07!3;UBERON:0003281!1.37e-07!3;UBERON:0009664!1.37e-07!3;UBERON:0002296!1.37e-07!3;UBERON:0005602!1.37e-07!3;UBERON:0001179!1.37e-07!3;UBERON:0006293!1.37e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;1.49e-12;10!UBERON:0000178;1.48e-08;15!UBERON:0000179;1.48e-08;15!UBERON:0000463;1.48e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,1.55e-12,10;UBERON:0000358,1.55e-12,10;UBERON:0000307,1.55e-12,10;UBERON:0000091,1.55e-12,10;UBERON:0000087,1.55e-12,10;UBERON:0007010,1.55e-12,10;UBERON:0007806,1.55e-12,10;UBERON:0008780,1.55e-12,10;UBERON:0005728,1.55e-12,10;UBERON:0000178,1.52e-08,15;UBERON:0000179,1.52e-08,15;UBERON:0000463,1.52e-08,15 | |||
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| ||
|short_description=p@chr1:40846881..40846909,+ | |short_description=p@chr1:40846881..40846909,+ | ||
}} | }} |
Latest revision as of 08:11, 28 July 2015
Short description: | p@chr1:40846881..40846909, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:40846881..40846909, + |
Coexpression cluster: | C61_migratory_Dendritic_immature_Macrophage_xeroderma_cord_b |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 2.12e-43 | 5 |
conventional dendritic cell | 2.59e-24 | 8 |
dendritic cell | 5.81e-20 | 10 |
hematopoietic cell | 3.07e-15 | 177 |
leukocyte | 1.42e-12 | 136 |
lymphoid lineage restricted progenitor cell | 7.86e-12 | 52 |
lymphocyte | 1.34e-11 | 53 |
common lymphoid progenitor | 1.34e-11 | 53 |
hematopoietic oligopotent progenitor cell | 2.06e-10 | 161 |
hematopoietic multipotent progenitor cell | 2.06e-10 | 161 |
hematopoietic stem cell | 6.40e-10 | 168 |
lymphocyte of B lineage | 4.78e-09 | 24 |
pro-B cell | 4.78e-09 | 24 |
CD1a-positive Langerhans cell | 5.74e-08 | 2 |
immature CD1a-positive Langerhans cell | 5.74e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 1.55e-12 | 10 |
blastocyst | 1.55e-12 | 10 |
blastula | 1.55e-12 | 10 |
bilaminar disc | 1.55e-12 | 10 |
inner cell mass | 1.55e-12 | 10 |
cleaving embryo | 1.55e-12 | 10 |
connecting stalk | 1.55e-12 | 10 |
inner cell mass derived epiblast | 1.55e-12 | 10 |
extraembryonic mesoderm | 1.55e-12 | 10 |
blood | 1.52e-08 | 15 |
haemolymphatic fluid | 1.52e-08 | 15 |
organism substance | 1.52e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 1.41e-14 | 1 |
cutaneous T cell lymphoma | 1.41e-14 | 1 |
mycosis fungoides | 1.41e-14 | 1 |