FFCP PHASE1:Hg19::chr1:45277688..45277721,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:45277688..45277721,+ | |||
|coexpression_cluster_id=C65 | |coexpression_cluster_id=C65 | ||
|description=CAGE_peak_at_chr1:45277688..45277721,+ | |description=CAGE_peak_at_chr1:45277688..45277721,+ | ||
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|ontology_enrichment_celltype=CL:0000048!7.68e-20!430;CL:0000723!6.84e-19!436;CL:0000034!1.13e-18!444;CL:0002057!2.91e-17!42;CL:0000144!6.34e-17!625;CL:0002371!1.36e-16!591;CL:0002320!2.55e-16!365;CL:0000860!2.51e-15!45;CL:0000134!1.19e-14!358;CL:0000057!6.35e-14!75;CL:0000055!1.19e-13!180;CL:0000219!1.51e-13!390;CL:0000012!6.15e-13!682;CL:0000548!1.05e-12!679;CL:0000004!1.05e-12!679;CL:0000255!1.05e-12!679;CL:0002009!2.63e-12!65;CL:0000557!1.34e-11!71;CL:0002620!1.97e-11!23;CL:0002194!2.20e-11!63;CL:0000576!2.20e-11!63;CL:0000040!2.20e-11!63;CL:0000559!2.20e-11!63;CL:0000003!1.70e-10!722;CL:0000839!2.13e-10!70;CL:0000766!5.35e-10!76 | |ontology_enrichment_celltype=CL:0000048!7.68e-20!430;CL:0000723!6.84e-19!436;CL:0000034!1.13e-18!444;CL:0002057!2.91e-17!42;CL:0000144!6.34e-17!625;CL:0002371!1.36e-16!591;CL:0002320!2.55e-16!365;CL:0000860!2.51e-15!45;CL:0000134!1.19e-14!358;CL:0000057!6.35e-14!75;CL:0000055!1.19e-13!180;CL:0000219!1.51e-13!390;CL:0000012!6.15e-13!682;CL:0000548!1.05e-12!679;CL:0000004!1.05e-12!679;CL:0000255!1.05e-12!679;CL:0002009!2.63e-12!65;CL:0000557!1.34e-11!71;CL:0002620!1.97e-11!23;CL:0002194!2.20e-11!63;CL:0000576!2.20e-11!63;CL:0000040!2.20e-11!63;CL:0000559!2.20e-11!63;CL:0000003!1.70e-10!722;CL:0000839!2.13e-10!70;CL:0000766!5.35e-10!76 | ||
|ontology_enrichment_celltype_v019=CL:0000860;6.60e-44;33!CL:0002057;6.60e-44;33!CL:0000473;2.04e-26;39!CL:0000234;2.04e-26;39!CL:0000576;3.03e-20;48!CL:0002537;8.31e-12;5!CL:0000766;3.52e-09;69!CL:0002583;4.99e-08;2 | |ontology_enrichment_celltype_v019=CL:0000860;6.60e-44;33!CL:0002057;6.60e-44;33!CL:0000473;2.04e-26;39!CL:0000234;2.04e-26;39!CL:0000576;3.03e-20;48!CL:0002537;8.31e-12;5!CL:0000766;3.52e-09;69!CL:0002583;4.99e-08;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.12e-35,42;CL:0002057,6.12e-35,42;CL:0000473,7.09e-30,48;CL:0000234,7.09e-30,48;CL:0002194,8.50e-23,59;CL:0000576,8.50e-23,59;CL:0000040,8.50e-23,59;CL:0000559,8.50e-23,59;CL:0002009,6.93e-22,61;CL:0000839,7.59e-20,66;CL:0000557,1.79e-19,67;CL:0000766,9.02e-18,72;CL:0002320,6.06e-13,361;CL:0002537,6.97e-12,5;CL:0000134,6.63e-11,354;CL:0000763,3.49e-10,108;CL:0000049,3.49e-10,108;CL:0000048,4.59e-10,427;CL:0000723,8.92e-10,433;CL:0000034,2.10e-09,441;CL:0002087,2.87e-09,115;CL:0000219,4.54e-09,386;CL:0002031,1.11e-08,120;CL:0002583,1.87e-08,2;CL:0000738,4.15e-07,136 | |||
|ontology_enrichment_development_v019=CL:0002057;1.49e-25;42 | |ontology_enrichment_development_v019=CL:0002057;1.49e-25;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!1.48e-15!167;UBERON:0002384!8.32e-15!375;UBERON:0004765!2.38e-11!101;UBERON:0001434!2.38e-11!101;UBERON:0002371!7.26e-11!80;UBERON:0001474!3.20e-09!86;UBERON:0003081!1.56e-08!216;UBERON:0000914!4.32e-08!83;UBERON:0002329!4.32e-08!83;UBERON:0003077!4.32e-08!83;UBERON:0003059!4.32e-08!83;UBERON:0007282!4.32e-08!83;UBERON:0009618!4.32e-08!83;UBERON:0007285!4.32e-08!83;UBERON:0002199!1.83e-07!45;UBERON:0002416!1.83e-07!45;UBERON:0000926!4.70e-07!448;UBERON:0004120!4.70e-07!448;UBERON:0006603!4.70e-07!448 | |ontology_enrichment_uberon=UBERON:0002204!1.48e-15!167;UBERON:0002384!8.32e-15!375;UBERON:0004765!2.38e-11!101;UBERON:0001434!2.38e-11!101;UBERON:0002371!7.26e-11!80;UBERON:0001474!3.20e-09!86;UBERON:0003081!1.56e-08!216;UBERON:0000914!4.32e-08!83;UBERON:0002329!4.32e-08!83;UBERON:0003077!4.32e-08!83;UBERON:0003059!4.32e-08!83;UBERON:0007282!4.32e-08!83;UBERON:0009618!4.32e-08!83;UBERON:0007285!4.32e-08!83;UBERON:0002199!1.83e-07!45;UBERON:0002416!1.83e-07!45;UBERON:0000926!4.70e-07!448;UBERON:0004120!4.70e-07!448;UBERON:0006603!4.70e-07!448 | ||
|ontology_enrichment_uberon_v019=UBERON:0000305;1.90e-08;7 | |ontology_enrichment_uberon_v019=UBERON:0000305;1.90e-08;7 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.43e-16,76;UBERON:0004765,3.76e-16,90;UBERON:0001434,2.31e-15,100;UBERON:0001474,5.47e-15,82;UBERON:0002405,1.27e-12,93;UBERON:0002384,2.61e-12,371;UBERON:0002390,1.00e-11,98;UBERON:0003061,1.00e-11,98;UBERON:0002204,2.03e-11,167;UBERON:0002193,3.49e-10,108;UBERON:0003081,6.95e-10,203;UBERON:0000926,1.08e-08,315;UBERON:0004120,1.08e-08,315;UBERON:0006603,1.08e-08,315;UBERON:0000305,1.68e-08,7;UBERON:0004871,1.92e-07,8 | |||
|phase1_expression=0.181678379270557,0,0,0,0.446961094427288,0,0,0.631719873426831,0,0,0,0,0,0.123766352960047,1.32558950291166,1.34465029290355,0.602694528023977,0.730310090387373,0.487932798790507,0,0.204000691244253,0,0.286235987131057,0.136874425072884,0.125542639594803,0,0,0,0.393364276848904,0.383829398097213,0,0,0,0,0,0,0,0.553995408531877,0.601633342410425,0.217010870715852,0,0.32389366601898,0,4.21654892460738,6.04601509902095,6.79235371325885,1.16214518452842,2.87817521615278,0.929119112685311,1.43846196161075,1.2808035326455,2.83778675866302,0.344745680736619,0.645484683583826,0,2.25890807451126,3.0019676506363,2.02251136000576,2.75475503133812,3.20929027076094,3.19668562899521,0.989553900560148,5.98390972864896,4.26224750532694,0.580418477257168,1.70215567407342,0,1.25624332628372,2.08593167368081,2.38907729175628,0,1.10483290796269,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0,0,0,0,0,0.472674085820339,0,0.702678285545008,0,0,0,0,0.522389211897802,0.664789802594326,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,1.2333377420858,0,0,0.163461903113459,0,0,0.468642863667593,0.936480230490962,1.71141546463335,0.597794722207204,0.469737994575059,0.161872944368132,0.280901613404497,0.204154171254893,0.61417158655884,0.206651562351531,0,0,0,0,1.0100166837244,0.500474079487857,0.554128230968366,0.877955241761676,0.612975591598039,0.150238058906597,0.340296549480063,0.717558542755448,0,0.423863802319124,0.300091096084402,0.618315175430633,1.03056216018252,0.930584281657949,0.675105328965065,0.292311015483596,0.757301322732344,0.184099797284599,0.969876340912871,0,0.403008392910561,0.67824236924195,0,0,0,0,0,0,0.10366105501537,0,0,0,3.21620469096443,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,1.03993478527958,0,0,0.939269553886573,0,0,0,0,0,0,0,0.445893486866185,0,0,0,0,0,0,0,0,0.207328115540772,0.288239906833923,0,0,0,0,0,0,0,0,0.560655421726804,0,1.39342743059805,0.775630294546667,0,0,2.12750493267896,1.04007436911366,0,0,0.266422179016099,0,0,0,0,0,0,0.904318131178758,0.871533458600294,0.599837947092342,0,0,0,0.479249710983165,1.14861935834114,1.42636905040718,0,0,0.179060963239896,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,1.00034104211935,0.271265023699736,0.415941723061614,1.24900292158013,0.157702415033935,0.234282829985426,0.601892199455438,2.27407504055985,0,0.664225598535437,0.553107505625109,0.868836144680828,1.76221041716467,0,0,0,0.106727557803444,0,0,0,0.248107807818777,0.153461973288062,0,0.384417447767103,0.511707249066704,0.482561763430822,0,1.54209693802656,1.77561725313127,1.06765302817952,0,1.97557643381931,0.241718899183244,0,0.0920809889358963,0,0.728364672026868,0.131124414959424,0,0.308061348417659,0.784349769176855,0,0.211103257785751,0,0.170093705276516,0.215915916102139,0,0.812839312631559,1.00337954770971,0.509752546090077,0,0.223874754722178,0,0,0.256450125116389,0.656029291399411,0.650756789328606,0,0,0,0,0,0,0.386682873168488,0,0,0.275673144969061,0.107420244868274,0,0.0852266274161009,0.178064071293475,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0.286249773483982,0,0,0.762520775695299,0,0,0.318203247925937,0.78494864019923,0,0.274537029736055,0.117812402345686,0.202182481573316,0,0,0,0.243713489631284,0,0.272999822815972,0,0,1.10273068709225,0,0,0,0,0.405820753925408,0.6196469961995,0.281695602532241,0,0,0.35667105148125,2.48332744849418,0,0.329294892959902,1.51789269506286,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67121139316383,0,1.53580351049616,0,0,0,0.659215496907038,0,0,0,0,0.102268682502155,0,0.622079175323615,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0.254253650292766,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.549585560411174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24252535565433,0,0,0.104602846312333,0,0,1.20084057741958,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0.2249738915515,0.77380195455795,0,0,0.236417121897595,0,0.105600336519406,0,0,0,0,0,0.542999601753713,0,0,0,0,0,0,0,0,0.258565912723101,0.13223260174269,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0,0,0,0,0,0.235265819698172,0,0,1.04478362020812,0.701139929541673,1.66441758450784,0.568209015825267,0.251567901752575,0,0,0.604923695052956,0.310874401165561,0,0.63718706865481,0,0.621051827505038,1.24411862352257,1.59505028734797,0,0.150257608997218,0.380805212168795,0.406870733204662,0.363697318405119,0.107410557042488,0,0,0,0.343395705182793,0.336749488765919,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,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| ||
|short_description=p@chr1:45277688..45277721,+ | |short_description=p@chr1:45277688..45277721,+ | ||
}} | }} |
Latest revision as of 08:38, 28 July 2015
Short description: | p@chr1:45277688..45277721, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:45277688..45277721, + |
Coexpression cluster: | C65_CD14_Eosinophils_Monocytederived_Basophils_immature_Macrophage_Neutrophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.12e-35 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.12e-35 | 42 |
defensive cell | 7.09e-30 | 48 |
phagocyte | 7.09e-30 | 48 |
monopoietic cell | 8.50e-23 | 59 |
monocyte | 8.50e-23 | 59 |
monoblast | 8.50e-23 | 59 |
promonocyte | 8.50e-23 | 59 |
macrophage dendritic cell progenitor | 6.93e-22 | 61 |
myeloid lineage restricted progenitor cell | 7.59e-20 | 66 |
granulocyte monocyte progenitor cell | 1.79e-19 | 67 |
myeloid leukocyte | 9.02e-18 | 72 |
connective tissue cell | 6.06e-13 | 361 |
amnion mesenchymal stem cell | 6.97e-12 | 5 |
mesenchymal cell | 6.63e-11 | 354 |
myeloid cell | 3.49e-10 | 108 |
common myeloid progenitor | 3.49e-10 | 108 |
multi fate stem cell | 4.59e-10 | 427 |
somatic stem cell | 8.92e-10 | 433 |
stem cell | 2.10e-09 | 441 |
nongranular leukocyte | 2.87e-09 | 115 |
motile cell | 4.54e-09 | 386 |
hematopoietic lineage restricted progenitor cell | 1.11e-08 | 120 |
subcutaneous preadipocyte | 1.87e-08 | 2 |
leukocyte | 4.15e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.43e-16 | 76 |
skeletal element | 3.76e-16 | 90 |
skeletal system | 2.31e-15 | 100 |
bone element | 5.47e-15 | 82 |
immune system | 1.27e-12 | 93 |
connective tissue | 2.61e-12 | 371 |
hematopoietic system | 1.00e-11 | 98 |
blood island | 1.00e-11 | 98 |
musculoskeletal system | 2.03e-11 | 167 |
hemolymphoid system | 3.49e-10 | 108 |
lateral plate mesoderm | 6.95e-10 | 203 |
mesoderm | 1.08e-08 | 315 |
mesoderm-derived structure | 1.08e-08 | 315 |
presumptive mesoderm | 1.08e-08 | 315 |
amnion | 1.68e-08 | 7 |
somatic layer of lateral plate mesoderm | 1.92e-07 | 8 |