FFCP PHASE1:Hg19::chr1:56977818..56977827,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:56977818..56977827,- to FFCP PHASE1:Hg19::chr1:56977818..56977827,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:56977818..56977827,- | |||
|coexpression_cluster_id=C666 | |||
|description=CAGE_peak_at_chr1:56977818..56977827,- | |||
|id=chr1:56977818..56977827,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000135;2.47e-28;3!CL:0000388;2.47e-28;3!CL:0000214;1.25e-13;3!CL:0000346;3.15e-13;3!CL:1000428;3.15e-13;3!CL:0000499;1.68e-11;28!CL:0000153;6.87e-10;9!CL:0000447;6.87e-10;9!CL:0002559;2.73e-08;5!CL:0000235;5.10e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,1.42e-28,3;CL:0000388,1.42e-28,3;CL:0000214,1.25e-13,3;CL:0000346,2.05e-13,3;CL:1000428,2.05e-13,3;CL:0000499,1.69e-11,28;CL:0000153,8.24e-10,9;CL:0000447,8.24e-10,9;CL:0002559,2.11e-08,5;CL:0000235,5.58e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0005754;2.50e-10;1!UBERON:0004874;2.50e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.40e-10!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;2.47e-28;3!UBERON:0000043;2.47e-28;3!UBERON:0007845;2.47e-28;3!UBERON:0006915;1.25e-13;3!UBERON:0007616;1.25e-13;3!UBERON:0002217;1.25e-13;3!UBERON:0002018;1.25e-13;3!UBERON:0000412;3.15e-13;3!UBERON:0001992;3.15e-13;3!UBERON:0004905;4.62e-11;8!UBERON:0000982;4.62e-11;8!UBERON:0004770;4.62e-11;8!UBERON:0007029;2.50e-10;1!UBERON:0000989;2.50e-10;1!UBERON:0000998;2.50e-10;1!UBERON:0008811;2.50e-10;1!UBERON:0006868;2.50e-10;1!UBERON:0002426;2.50e-10;1!UBERON:0003831;2.50e-10;1!UBERON:0003898;2.50e-10;1!UBERON:0004830;2.50e-10;1!UBERON:0003830;2.50e-10;1!UBERON:0005175;2.50e-10;1!UBERON:0001774;2.50e-10;1!UBERON:0001103;2.50e-10;1!UBERON:0002073;2.73e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,1.42e-28,3;UBERON:0000043,1.42e-28,3;UBERON:0007845,1.42e-28,3;UBERON:0006915,1.25e-13,3;UBERON:0007616,1.25e-13,3;UBERON:0002217,1.25e-13,3;UBERON:0002018,1.25e-13,3;UBERON:0000412,2.05e-13,3;UBERON:0001992,2.05e-13,3;UBERON:0004905,5.87e-11,8;UBERON:0000982,5.87e-11,8;UBERON:0004770,5.87e-11,8;UBERON:0002426,1.57e-10,1;UBERON:0003831,1.57e-10,1;UBERON:0003898,1.57e-10,1;UBERON:0004830,1.57e-10,1;UBERON:0003830,1.57e-10,1;UBERON:0005175,1.57e-10,1;UBERON:0001774,1.57e-10,1;UBERON:0001103,1.57e-10,1;UBERON:0010084,1.57e-10,1;UBERON:0000989,1.89e-10,1;UBERON:0008811,1.89e-10,1;UBERON:0006258,1.89e-10,1;UBERON:0005876,1.89e-10,1;UBERON:0004874,1.89e-10,1;UBERON:0007029,2.28e-10,1;UBERON:0000998,2.50e-10,1;UBERON:0006868,2.50e-10,1;UBERON:0002073,2.11e-08,5;UBERON:0005086,2.11e-08,5 | |||
|phase1_expression=0.181678379270557,0.856402095563933,0.422863212287913,0,0.446961094427288,0,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0.309706370895104,0,0,0,0.344745680736619,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01392563272577,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573673241497627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0.309977343527296,0,1.23633464639278,0,0,0,0.125118519871964,0,0,0.30648779579902,0.300476117813194,0,0.538168907066586,0,0,0.300091096084402,0.206105058476878,0.257640540045629,0.558350568994769,0,0.194874010322397,0.252433774244115,0.460249493211497,0.80823028409406,0.355009592516614,0.10075209822764,0.169560592310488,0,0,0,0.121973706129595,0,0.116193942869518,0,0,0,3.12899064659632,1.92972281457866,0,0,0,0,0,0,0.110293972732394,0,0.237270619111097,0,0,0,0,0,0,0,2.53510069643662,0,0,0,0.122988438543114,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,1.2162378064119,0,2.10833939483032,0,1.14861935834114,0,0.434343920002738,0.61642896765115,0.358121926479791,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.613457458595699,1.00034104211935,0,0.623912584592421,0.892144943985809,0.473107245101804,0.35142424497814,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,0,0,0,0,0,0,0.496215615637554,0,0.561320188866147,0.384417447767103,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0.137836572484531,0,0.145016693914229,0,0.267096106940212,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0.372158369359667,0,0,0,0.855877976067841,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,4.01104507065562,7.90307743103764,0,0,0,0,0,0.376575203107117,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0.690503839458535,0,0,0,0,0,0.260427761085233,0,0,0,0,0,0,0,0,0,0,0,0,0.591095237907095,0,0,0,0.230850775511391,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.134802265961354,1.60515529459758,0.234264445725339,0,0,0,0,0,0.61214552326098,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0.34945333648406,0,0,0.0730893170861856,0,0.387956065953678,0,0.225980740780532,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0.171594997861965,0,0,0,0,0,0,0.288950589901519,0.600420288709789,0,0,0,0,0.558564802544508,0.229160424011684,0,0,0,0.223171457441873,0.0671834724867263,0,0,0.0787831823072236,0,0.0674035438541849,0,0,0.795229689809303,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0.191915197319445,0,0.662091970365432,0,0,0,0,0,0,0.511164065356265,0,0,0,0,0.13223260174269,0,0,0.640724475406168,0.157204305099666,0.828478110694391,0.496166021811951,0,0,0,0,0,0,0.327872630709804,0,0,0.366078794705889,0,0,0.221858103073705,0.0620964029413835,0,0,0,0,0,0,0,0.149254802886874,0,0.554805861502613,0.378806010550178,0.251567901752575,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0.615349092722265,0.756215088665154,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0.327543835020193,0,0.0675375846183947,0,0.413373593002368,0.0634158101939068,0.546974809018219,0,1.48863353516788,0,0,0,0.336283722218824,0,0,0.177404740325278,0,0,0,0,0,0,0.156986185701028,0,0,0.913158720509496,0,0,0.0714765441766563,0,0,0,1.60342272946051,0,0,0,0.430227358820278,0,0,1.27016115057279,0,0.31020638566432,0,0,0,0.121917924982269,0,0,1.1598144313382,1.45713297917742,0,0,0,0,0,0,0,0.218559560503957,0,0.245148321753905,0,0,0.297046400327086,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0,1.46067277649303,0,0.143339583151451,0,0.0679914901909147,0,0,2.23197010900051,6.00828317220844,1.73050624849516,0,0.109265571963696,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0.852935927603924,0.952257725854961,0,0,0,0.381882949668989,1.21270313374932,0.217716747896961,0.342233301085281,0,0,0.665320713092027,0,0,0,0,0,0,0,0,0.201273793591026,0 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|phase1_expression=0.181678379270557,0.856402095563933,0.422863212287913,0,0.446961094427288,0,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0.309706370895104,0,0,0,0.344745680736619,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01392563272577,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573673241497627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0.309977343527296,0,1.23633464639278,0,0,0,0.125118519871964,0,0,0.30648779579902,0.300476117813194,0,0.538168907066586,0,0,0.300091096084402,0.206105058476878,0.257640540045629,0.558350568994769,0,0.194874010322397,0.252433774244115,0.460249493211497,0.80823028409406,0.355009592516614,0.10075209822764,0.169560592310488,0,0,0,0.121973706129595,0,0.116193942869518,0,0,0,3.12899064659632,1.92972281457866,0,0,0,0,0,0,0.110293972732394,0,0.237270619111097,0,0,0,0,0,0,0,2.53510069643662,0,0,0,0.122988438543114,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,1.2162378064119,0,2.10833939483032,0,1.14861935834114,0,0.434343920002738,0.61642896765115,0.358121926479791,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.613457458595699,1.00034104211935,0,0.623912584592421,0.892144943985809,0.473107245101804,0.35142424497814,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,0,0,0,0,0,0,0.496215615637554,0,0.561320188866147,0.384417447767103,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0.137836572484531,0,0.145016693914229,0,0.267096106940212,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0.372158369359667,0,0,0,0.855877976067841,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,4.01104507065562,7.90307743103764,0,0,0,0,0,0.376575203107117,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0.690503839458535,0,0,0,0,0,0.260427761085233,0,0,0,0,0,0,0,0,0,0,0,0,0.591095237907095,0,0,0,0.230850775511391,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.134802265961354,1.60515529459758,0.234264445725339,0,0,0,0,0,0.61214552326098,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0.34945333648406,0,0,0.0730893170861856,0,0.387956065953678,0,0.225980740780532,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0.171594997861965,0,0,0,0,0,0,0.288950589901519,0.600420288709789,0,0,0,0,0.558564802544508,0.229160424011684,0,0,0,0.223171457441873,0.0671834724867263,0,0,0.0787831823072236,0,0.0674035438541849,0,0,0.795229689809303,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0.191915197319445,0,0.662091970365432,0,0,0,0,0,0,0.511164065356265,0,0,0,0,0.13223260174269,0,0,0.640724475406168,0.157204305099666,0.828478110694391,0.496166021811951,0,0,0,0,0,0,0.327872630709804,0,0,0.366078794705889,0,0,0.221858103073705,0.0620964029413835,0,0,0,0,0,0,0,0.149254802886874,0,0.554805861502613,0.378806010550178,0.251567901752575,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0.615349092722265,0.756215088665154,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0.327543835020193,0,0.0675375846183947,0,0.413373593002368,0.0634158101939068,0.546974809018219,0,1.48863353516788,0,0,0,0.336283722218824,0,0,0.177404740325278,0,0,0,0,0,0,0.156986185701028,0,0,0.913158720509496,0,0,0.0714765441766563,0,0,0,1.60342272946051,0,0,0,0.430227358820278,0,0,1.27016115057279,0,0.31020638566432,0,0,0,0.121917924982269,0,0,1.1598144313382,1.45713297917742,0,0,0,0,0,0,0,0.218559560503957,0,0.245148321753905,0,0,0.297046400327086,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0,1.46067277649303,0,0.143339583151451,0,0.0679914901909147,0,0,2.23197010900051,6.00828317220844,1.73050624849516,0,0.109265571963696,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0.852935927603924,0.952257725854961,0,0,0,0.381882949668989,1.21270313374932,0.217716747896961,0.342233301085281,0,0,0.665320713092027,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p@chr1:56977818..56977827,- | |||
}} | }} |
Latest revision as of 09:19, 28 July 2015
Short description: | p@chr1:56977818..56977827, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:56977818..56977827, - |
Coexpression cluster: | C666_tenocyte_Synoviocyte_Fibroblast_Chondrocyte_Nucleus_normal_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 1.42e-28 | 3 |
tendon cell | 1.42e-28 | 3 |
synovial cell | 1.25e-13 | 3 |
hair follicle dermal papilla cell | 2.05e-13 | 3 |
stem cell of epidermis | 2.05e-13 | 3 |
stromal cell | 1.69e-11 | 28 |
GAG secreting cell | 8.24e-10 | 9 |
carbohydrate secreting cell | 8.24e-10 | 9 |
hair follicle cell | 2.11e-08 | 5 |
macrophage | 5.58e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 1.42e-28 | 3 |
tendon | 1.42e-28 | 3 |
regular connective tissue | 1.42e-28 | 3 |
stratified squamous epithelium | 1.25e-13 | 3 |
layer of synovial tissue | 1.25e-13 | 3 |
synovial joint | 1.25e-13 | 3 |
synovial membrane of synovial joint | 1.25e-13 | 3 |
dermal papilla | 2.05e-13 | 3 |
papillary layer of dermis | 2.05e-13 | 3 |
articulation | 5.87e-11 | 8 |
skeletal joint | 5.87e-11 | 8 |
articular system | 5.87e-11 | 8 |
chest muscle | 1.57e-10 | 1 |
respiratory system muscle | 1.57e-10 | 1 |
skeletal muscle of trunk | 1.57e-10 | 1 |
respiratory system skeletal muscle | 1.57e-10 | 1 |
thoracic segment muscle | 1.57e-10 | 1 |
chest organ | 1.57e-10 | 1 |
muscle of trunk | 1.57e-10 | 1 |
diaphragm | 1.57e-10 | 1 |
future diaphragm | 1.57e-10 | 1 |
penis | 1.89e-10 | 1 |
intromittent organ | 1.89e-10 | 1 |
lateral plate mesenchyme | 1.89e-10 | 1 |
undifferentiated genital tubercle | 1.89e-10 | 1 |
somatopleure | 1.89e-10 | 1 |
surface | 2.28e-10 | 1 |
seminal vesicle | 2.50e-10 | 1 |
seminal fluid secreting gland | 2.50e-10 | 1 |
hair follicle | 2.11e-08 | 5 |
hair follicle placode | 2.11e-08 | 5 |