FFCP PHASE1:Hg19::chr1:98642833..98642844,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:98642833..98642844,+
|short_description=p@chr1:98642833..98642844,+
|description=CAGE_peak_at_chr1:98642833..98642844,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:98642833..98642844,+ | |||
|description=CAGE_peak_at_chr1:98642833..98642844,+ | |||
|id=chr1:98642833..98642844,+ | |||
|ontology_enrichment_celltype=CL:0000243!1.91e-09!15;CL:0000125!1.91e-09!15;CL:0000030!1.91e-09!15;CL:0000339!1.91e-09!15;CL:0000128!1.45e-08!7;CL:0000126!1.45e-08!7;CL:0000127!1.45e-08!7;CL:0002453!1.45e-08!7;CL:0002605!1.82e-08!3;CL:0000095!3.02e-08!17;CL:0000123!3.02e-08!17;CL:0000064!1.09e-07!3;CL:0005012!1.09e-07!3;CL:0000067!1.09e-07!3;CL:0002304!1.09e-07!3;CL:0002618!1.30e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002605;3.00e-66;3!CL:0000128;1.16e-50;7!CL:0000126;1.16e-50;7!CL:0000127;1.16e-50;7!CL:0000243;1.88e-46;15!CL:0000125;1.88e-46;15!CL:0000095;1.36e-41;17!CL:0002573;4.17e-30;2!CL:0002319;2.42e-29;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,1.54e-66,3;CL:0000128,7.90e-51,7;CL:0000126,7.90e-51,7;CL:0000127,7.90e-51,7;CL:0002453,7.90e-51,7;CL:0000243,2.04e-46,15;CL:0000125,2.04e-46,15;CL:0000030,2.04e-46,15;CL:0000339,2.04e-46,15;CL:0000095,1.46e-41,17;CL:0000123,1.46e-41,17;CL:0002573,7.54e-30,2;CL:0002319,2.54e-29,25;CL:0000333,1.81e-18,41;CL:0000133,4.89e-13,59;CL:0000221,9.53e-11,72 | |||
|ontology_enrichment_development_v019=CL:0000339;1.88e-46;15!CL:0000133;3.62e-11;59!CL:0000221;3.04e-08;72 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3307;2.59e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,1.85e-12,2 | |||
|ontology_enrichment_uberon=UBERON:0001778!1.09e-07!3;UBERON:0001775!1.09e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000956;5.70e-14;25!UBERON:0000203;5.70e-14;25!UBERON:0000010;9.69e-11;8!UBERON:0002791;1.07e-10;32!UBERON:0001869;1.07e-10;32!UBERON:0003528;1.08e-10;34!UBERON:0002020;1.08e-10;34!UBERON:0001893;1.08e-10;34!UBERON:0002780;7.41e-07;41!UBERON:0001890;7.41e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,5.15e-14,25;UBERON:0000203,5.15e-14,25;UBERON:0001016,1.26e-11,89;UBERON:0002791,3.94e-11,32;UBERON:0001869,3.94e-11,32;UBERON:0000010,1.18e-10,8;UBERON:0003528,1.62e-10,34;UBERON:0002020,1.62e-10,34;UBERON:0001893,1.62e-10,34;UBERON:0002780,7.99e-09,41;UBERON:0001890,7.99e-09,41;UBERON:0003080,7.99e-09,41;UBERON:0006240,7.99e-09,41;UBERON:0000955,4.32e-08,68;UBERON:0006238,4.32e-08,68;UBERON:0000073,6.21e-07,53;UBERON:0002616,6.21e-07,53;UBERON:0001017,7.77e-07,81 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,1.71741592278634,2.05311637609326,1.75759695432724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0.296573126324121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.945348171640679,0.443458794925128,0.263504357079378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.446498641420399,0.44905874525234,0.337834441449967,0,0,0,0,0,0,0,0,0.132409180813219,0.286836620748814,0.354668382198357,0,0,0,0,0,0.326923806226917,0,0,0,0,0,0,0,0.161872944368132,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34779121492523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647747748306418,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0.15350367472613,0,0,0,0.0852266274161009,0,0,0,0.127612712494584,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606802608747567,0,0,0,0,0,0,0.140669416410513,0.445234820091624,0,0,0,0,0,3.1703291575668,0,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632994193584081,0.163232808159148,0,0,0,0,0,0.889563386041866,0,0.104421949505455,0.067401132980677,0,0,0,0,0.485560759068186,0,0,0.61214552326098,0,0,0,0.664653872707185,0,0,0,0,0.970722711091971,0,0.0979923974143777,0,0,0.171986032471617,0,0,0,0,0,0,0,0,0,0,0.240476460754601,0,0,0,0,0,0,0.621262677827163,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0,0,0,0,0.575745591958336,0,0,0,0,0,0,0,0,0.170388021785422,0.113312091520126,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0.124980407962107,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0.521745061811734,0,0,0,0.181848659202559,0.107410557042488,0.464033759878494,0,0.400027764663154,0,0,0,0.385239660814607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491545817507439,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0.655257829152084,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0.161475645631851,0,0,0,0,0.231051332300676,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,1.64092442705466,0,0,0,0,0,0,0,0.227662191351298,0,0,0.171488009437418,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30165200803622,1.10777426186905,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.401206833445841,0,0,0,0,0,0,0,0,0,0,0.504665699340316,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0,0,0,0,1.28072815053259,1.9307228228694,0,0,0,0,0,0,0 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| ||
|short_description=p@chr1:98642833..98642844,+ | |||
}} | }} |
Latest revision as of 11:43, 28 July 2015
Short description: | p@chr1:98642833..98642844, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:98642833..98642844, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 1.54e-66 | 3 |
oligodendrocyte | 7.90e-51 | 7 |
macroglial cell | 7.90e-51 | 7 |
astrocyte | 7.90e-51 | 7 |
oligodendrocyte precursor cell | 7.90e-51 | 7 |
glial cell (sensu Vertebrata) | 2.04e-46 | 15 |
glial cell | 2.04e-46 | 15 |
glioblast | 2.04e-46 | 15 |
glioblast (sensu Vertebrata) | 2.04e-46 | 15 |
neuron associated cell | 1.46e-41 | 17 |
neuron associated cell (sensu Vertebrata) | 1.46e-41 | 17 |
Schwann cell | 7.54e-30 | 2 |
neural cell | 2.54e-29 | 25 |
migratory neural crest cell | 1.81e-18 | 41 |
neurectodermal cell | 4.89e-13 | 59 |
ectodermal cell | 9.53e-11 | 72 |
Ontology term | p-value | n |
---|---|---|
cerebral cortex | 5.15e-14 | 25 |
pallium | 5.15e-14 | 25 |
nervous system | 1.26e-11 | 89 |
regional part of telencephalon | 3.94e-11 | 32 |
cerebral hemisphere | 3.94e-11 | 32 |
peripheral nervous system | 1.18e-10 | 8 |
brain grey matter | 1.62e-10 | 34 |
gray matter | 1.62e-10 | 34 |
telencephalon | 1.62e-10 | 34 |
regional part of forebrain | 7.99e-09 | 41 |
forebrain | 7.99e-09 | 41 |
anterior neural tube | 7.99e-09 | 41 |
future forebrain | 7.99e-09 | 41 |
brain | 4.32e-08 | 68 |
future brain | 4.32e-08 | 68 |
regional part of nervous system | 6.21e-07 | 53 |
regional part of brain | 6.21e-07 | 53 |
central nervous system | 7.77e-07 | 81 |
Ontology term | p-value | n |
---|---|---|
teratoma | 1.85e-12 | 2 |