FFCP PHASE1:Hg19::chr20:14248741..14248745,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr20:14248741..14248745,- | |||
|description=CAGE_peak_at_chr20:14248741..14248745,- | |||
|id=chr20:14248741..14248745,- | |||
|ontology_enrichment_celltype=CL:0002368!2.02e-16!13;CL:0002076!2.09e-15!43;CL:0002202!2.25e-12!9;CL:0002632!2.25e-12!9;CL:0000223!9.87e-10!59;CL:0000068!3.47e-08!3;CL:0000069!3.47e-08!3;CL:0000307!3.47e-08!3;CL:0000377!3.47e-08!3;CL:0002328!4.66e-08!3;CL:0000066!8.73e-08!254;CL:0002159!3.42e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002202;3.56e-46;9!CL:0002632;3.56e-46;9!CL:0002368;1.88e-43;13!CL:0000307;7.29e-36;3!CL:0002328;3.02e-35;3!CL:0002327;2.53e-27;4!CL:0002076;1.94e-11;42!CL:0002593;4.55e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002202,2.60e-46,9;CL:0002632,2.60e-46,9;CL:0002368,1.46e-43,13;CL:0000068,5.42e-36,3;CL:0000069,5.42e-36,3;CL:0000307,5.42e-36,3;CL:0000377,5.42e-36,3;CL:0002328,2.53e-35,3;CL:0002327,2.42e-27,4;CL:0002076,4.35e-17,42;CL:0000223,3.80e-12,58;CL:0000066,3.22e-07,253;CL:0002593,5.60e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000377;7.29e-36;3 | |||
|ontology_enrichment_disease=DOID:1749!6.05e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;4.59e-08;14!DOID:1909;4.55e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,4.94e-08,14;DOID:1909,4.17e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0004815!4.66e-08!3;UBERON:0002031!4.66e-08!3;UBERON:0007196!1.83e-07!14;UBERON:0001558!1.83e-07!14;UBERON:0002118!4.68e-07!5;UBERON:0004532!4.68e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;3.02e-35;3!UBERON:0002031;3.02e-35;3!UBERON:0007196;1.21e-27;15!UBERON:0001558;1.21e-27;15!UBERON:0001911;2.53e-27;4!UBERON:0002185;1.89e-21;5!UBERON:0003126;8.96e-16;7!UBERON:0001005;8.96e-16;7!UBERON:0000485;1.63e-15;7!UBERON:0005178;3.61e-12;34!UBERON:0002224;3.61e-12;34!UBERON:0005181;6.99e-11;35!UBERON:0000072;1.75e-10;37!UBERON:0000065;2.64e-10;44!UBERON:0002456;4.55e-07;2!UBERON:0000915;6.57e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,2.53e-35,3;UBERON:0002031,2.53e-35,3;UBERON:0007196,1.00e-27,15;UBERON:0001558,1.00e-27,15;UBERON:0001911,2.42e-27,4;UBERON:0005333,2.42e-27,4;UBERON:0008425,2.42e-27,4;UBERON:0005311,2.42e-27,4;UBERON:0002185,1.70e-21,5;UBERON:0003126,7.90e-16,7;UBERON:0001005,7.90e-16,7;UBERON:0000076,5.28e-14,8;UBERON:0000485,3.16e-12,9;UBERON:0005178,4.47e-12,34;UBERON:0002224,4.47e-12,34;UBERON:0005181,1.01e-11,35;UBERON:0005153,4.23e-11,37;UBERON:0008947,9.09e-11,38;UBERON:0003258,9.09e-11,38;UBERON:0000915,2.18e-10,52;UBERON:0000065,4.48e-10,54;UBERON:0001004,2.48e-09,74;UBERON:0005157,1.17e-08,47;UBERON:0000072,1.23e-08,47;UBERON:0002456,5.60e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83884244895785,1.204823675113,2.9580320813343,0,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0,0.161872944368132,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0.286804595389004,0,0,0,0,0,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439001141634502,2.24803506515239,0.100528972411631,0.648119116109707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0.141775097242386,9.13496931569053,5.23141089325132,1.53353071666084,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,3.57656445851882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246381468041427,0,0.116210378459959,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0.154048617114644,0,0.551346289938122,0,0,0,0,0.495854746082934,0.192190067365106,7.52915003718046,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0.243713489631284,1.05650146756755,0,0,0,0.551365343546124,0,0,0,0,0.202910376962704,0.30982349809975,0,0,0,0,0,0,0,0,0,1.82822014178473,3.35151137767894,4.3556393944529,0,0,0,0,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,1.365521379426,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0.632994193584081,0.163232808159148,0.706765357169704,0.216388639742091,0,0,0,0.296521128680622,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0.0967563312890851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412618309791701,0.83088067605837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66814029295813,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0.465788870628778,0,0,0,0.150257608997218,0.380805212168795,0.406870733204662,0.181848659202559,0.214821114084977,0,0.398095888698616,0,0,0,0,0,0.428883182749851,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0.184105950251841,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392590874004102,3.06721280704125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0.127762427639595,0,0,0,0,0,0,0,0,0,0.118193840883968,0.222462803784138,0,0,0.280272163313789,0,0,0,0,0,0,0.173858272302579,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71421575442263,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0.193766729508018,0.0620747142958579,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83884244895785,1.204823675113,2.9580320813343,0,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0,0.161872944368132,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0.286804595389004,0,0,0,0,0,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439001141634502,2.24803506515239,0.100528972411631,0.648119116109707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0.141775097242386,9.13496931569053,5.23141089325132,1.53353071666084,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,3.57656445851882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246381468041427,0,0.116210378459959,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0.154048617114644,0,0.551346289938122,0,0,0,0,0.495854746082934,0.192190067365106,7.52915003718046,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0.243713489631284,1.05650146756755,0,0,0,0.551365343546124,0,0,0,0,0.202910376962704,0.30982349809975,0,0,0,0,0,0,0,0,0,1.82822014178473,3.35151137767894,4.3556393944529,0,0,0,0,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,1.365521379426,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0.632994193584081,0.163232808159148,0.706765357169704,0.216388639742091,0,0,0,0.296521128680622,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0.0967563312890851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412618309791701,0.83088067605837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66814029295813,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0.465788870628778,0,0,0,0.150257608997218,0.380805212168795,0.406870733204662,0.181848659202559,0.214821114084977,0,0.398095888698616,0,0,0,0,0,0.428883182749851,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0.184105950251841,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392590874004102,3.06721280704125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0.127762427639595,0,0,0,0,0,0,0,0,0,0.118193840883968,0.222462803784138,0,0,0.280272163313789,0,0,0,0,0,0,0.173858272302579,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71421575442263,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0.193766729508018,0.0620747142958579,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr20:14248741..14248745,- | |||
}} | }} |
Latest revision as of 11:59, 28 July 2015
Short description: | p@chr20:14248741..14248745, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:14248741..14248745, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of tracheobronchial tree | 2.60e-46 | 9 |
epithelial cell of lower respiratory tract | 2.60e-46 | 9 |
respiratory epithelial cell | 1.46e-43 | 13 |
duct epithelial cell | 5.42e-36 | 3 |
branched duct epithelial cell | 5.42e-36 | 3 |
tracheal epithelial cell | 5.42e-36 | 3 |
tracheoblast | 5.42e-36 | 3 |
bronchial epithelial cell | 2.53e-35 | 3 |
mammary gland epithelial cell | 2.42e-27 | 4 |
endo-epithelial cell | 4.35e-17 | 42 |
endodermal cell | 3.80e-12 | 58 |
epithelial cell | 3.22e-07 | 253 |
smooth muscle cell of the internal thoracic artery | 5.60e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 2.53e-35 | 3 |
epithelium of bronchus | 2.53e-35 | 3 |
tracheobronchial tree | 1.00e-27 | 15 |
lower respiratory tract | 1.00e-27 | 15 |
mammary gland | 2.42e-27 | 4 |
mammary bud | 2.42e-27 | 4 |
mammary ridge | 2.42e-27 | 4 |
mammary placode | 2.42e-27 | 4 |
bronchus | 1.70e-21 | 5 |
trachea | 7.90e-16 | 7 |
respiratory airway | 7.90e-16 | 7 |
external ectoderm | 5.28e-14 | 8 |
simple columnar epithelium | 3.16e-12 | 9 |
thoracic cavity element | 4.47e-12 | 34 |
thoracic cavity | 4.47e-12 | 34 |
thoracic segment organ | 1.01e-11 | 35 |
epithelial bud | 4.23e-11 | 37 |
respiratory primordium | 9.09e-11 | 38 |
endoderm of foregut | 9.09e-11 | 38 |
thoracic segment of trunk | 2.18e-10 | 52 |
respiratory tract | 4.48e-10 | 54 |
respiratory system | 2.48e-09 | 74 |
epithelial fold | 1.17e-08 | 47 |
segment of respiratory tract | 1.23e-08 | 47 |
internal thoracic artery | 5.60e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 4.94e-08 | 14 |
melanoma | 4.17e-07 | 2 |