FFCP PHASE1:Hg19::chr20:48841260..48841280,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:48841260..48841280,- | |||
|coexpression_cluster_id=C6 | |coexpression_cluster_id=C6 | ||
|description=CAGE_peak_at_chr20:48841260..48841280,- | |description=CAGE_peak_at_chr20:48841260..48841280,- | ||
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|ontology_enrichment_celltype=CL:0002057!2.62e-74!42;CL:0000860!1.29e-68!45;CL:0000766!1.64e-50!76;CL:0002194!1.67e-50!63;CL:0000576!1.67e-50!63;CL:0000040!1.67e-50!63;CL:0000559!1.67e-50!63;CL:0002009!1.25e-48!65;CL:0000839!2.12e-44!70;CL:0000557!1.26e-43!71;CL:0002087!4.12e-31!119;CL:0000738!7.39e-31!140;CL:0000763!1.64e-30!112;CL:0000049!1.64e-30!112;CL:0002031!1.36e-24!124;CL:0000037!6.50e-24!172;CL:0000566!6.50e-24!172;CL:0000988!7.05e-22!182;CL:0000134!2.07e-20!358;CL:0002032!2.32e-20!165;CL:0000837!2.32e-20!165;CL:0002320!1.09e-19!365;CL:0000219!3.75e-17!390;CL:0000048!7.26e-15!430;CL:0000034!1.26e-14!444;CL:0000723!2.01e-14!436;CL:0002393!2.94e-10!9;CL:0002397!2.94e-10!9;CL:0000767!6.46e-09!3;CL:0000842!1.37e-08!3 | |ontology_enrichment_celltype=CL:0002057!2.62e-74!42;CL:0000860!1.29e-68!45;CL:0000766!1.64e-50!76;CL:0002194!1.67e-50!63;CL:0000576!1.67e-50!63;CL:0000040!1.67e-50!63;CL:0000559!1.67e-50!63;CL:0002009!1.25e-48!65;CL:0000839!2.12e-44!70;CL:0000557!1.26e-43!71;CL:0002087!4.12e-31!119;CL:0000738!7.39e-31!140;CL:0000763!1.64e-30!112;CL:0000049!1.64e-30!112;CL:0002031!1.36e-24!124;CL:0000037!6.50e-24!172;CL:0000566!6.50e-24!172;CL:0000988!7.05e-22!182;CL:0000134!2.07e-20!358;CL:0002032!2.32e-20!165;CL:0000837!2.32e-20!165;CL:0002320!1.09e-19!365;CL:0000219!3.75e-17!390;CL:0000048!7.26e-15!430;CL:0000034!1.26e-14!444;CL:0000723!2.01e-14!436;CL:0002393!2.94e-10!9;CL:0002397!2.94e-10!9;CL:0000767!6.46e-09!3;CL:0000842!1.37e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.38e-79;33!CL:0002057;3.38e-79;33!CL:0000473;3.87e-55;39!CL:0000234;3.87e-55;39!CL:0000576;4.56e-47;48!CL:0000766;6.75e-33;69!CL:0000767;9.24e-18;3!CL:0002087;4.25e-15;104!CL:0000763;1.68e-13;100!CL:0000094;1.75e-11;8!CL:0002393;7.86e-10;6!CL:0002397;7.86e-10;6!CL:0000738;1.23e-09;136!CL:0000226;1.71e-08;3!CL:0000842;1.71e-08;3!CL:0000081;2.20e-08;11 | |ontology_enrichment_celltype_v019=CL:0000860;3.38e-79;33!CL:0002057;3.38e-79;33!CL:0000473;3.87e-55;39!CL:0000234;3.87e-55;39!CL:0000576;4.56e-47;48!CL:0000766;6.75e-33;69!CL:0000767;9.24e-18;3!CL:0002087;4.25e-15;104!CL:0000763;1.68e-13;100!CL:0000094;1.75e-11;8!CL:0002393;7.86e-10;6!CL:0002397;7.86e-10;6!CL:0000738;1.23e-09;136!CL:0000226;1.71e-08;3!CL:0000842;1.71e-08;3!CL:0000081;2.20e-08;11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.54e-88,42;CL:0002057,1.54e-88,42;CL:0000473,7.96e-77,48;CL:0000234,7.96e-77,48;CL:0000766,6.91e-66,72;CL:0002194,2.03e-60,59;CL:0000576,2.03e-60,59;CL:0000040,2.03e-60,59;CL:0000559,2.03e-60,59;CL:0002009,2.65e-58,61;CL:0000839,1.46e-53,66;CL:0000557,1.07e-52,67;CL:0000763,2.93e-42,108;CL:0000049,2.93e-42,108;CL:0000738,3.93e-40,136;CL:0002087,1.78e-36,115;CL:0000037,2.05e-31,168;CL:0002031,1.26e-29,120;CL:0000988,1.59e-29,177;CL:0002032,1.36e-28,161;CL:0000837,1.36e-28,161;CL:0000767,8.01e-18,3;CL:0000134,8.44e-13,354;CL:0002320,1.97e-12,361;CL:0000094,1.61e-11,8;CL:0000219,3.93e-11,386;CL:0000034,6.61e-10,441;CL:0000048,1.54e-09,427;CL:0000723,2.56e-09,433;CL:0000226,1.62e-08,3;CL:0000842,1.62e-08,3;CL:0000081,2.07e-08,11;CL:0002581,9.18e-07,1 | |||
|ontology_enrichment_development_v019=CL:0002057;1.09e-64;42!CL:0000049;8.27e-10;108 | |ontology_enrichment_development_v019=CL:0002057;1.09e-64;42!CL:0000049;8.27e-10;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!6.45e-42!80;UBERON:0001474!3.25e-38!86;UBERON:0004765!3.59e-38!101;UBERON:0001434!3.59e-38!101;UBERON:0002390!2.87e-36!102;UBERON:0003061!2.87e-36!102;UBERON:0002193!5.78e-32!112;UBERON:0002405!6.75e-29!115;UBERON:0002384!1.39e-19!375;UBERON:0002204!1.86e-19!167;UBERON:0003081!6.71e-16!216;UBERON:0000926!4.02e-07!448;UBERON:0004120!4.02e-07!448;UBERON:0006603!4.02e-07!448 | |ontology_enrichment_uberon=UBERON:0002371!6.45e-42!80;UBERON:0001474!3.25e-38!86;UBERON:0004765!3.59e-38!101;UBERON:0001434!3.59e-38!101;UBERON:0002390!2.87e-36!102;UBERON:0003061!2.87e-36!102;UBERON:0002193!5.78e-32!112;UBERON:0002405!6.75e-29!115;UBERON:0002384!1.39e-19!375;UBERON:0002204!1.86e-19!167;UBERON:0003081!6.71e-16!216;UBERON:0000926!4.02e-07!448;UBERON:0004120!4.02e-07!448;UBERON:0006603!4.02e-07!448 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.37e-46,76;UBERON:0001474,3.20e-42,82;UBERON:0002390,1.40e-40,98;UBERON:0003061,1.40e-40,98;UBERON:0004765,4.81e-38,90;UBERON:0002405,1.16e-36,93;UBERON:0002193,2.38e-36,108;UBERON:0001434,9.42e-34,100;UBERON:0002204,3.70e-18,167;UBERON:0003081,8.24e-17,203;UBERON:0002384,6.28e-12,371;UBERON:0000926,7.75e-09,315;UBERON:0004120,7.75e-09,315;UBERON:0006603,7.75e-09,315 | |||
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| ||
|short_description=p@chr20:48841260..48841280,- | |short_description=p@chr20:48841260..48841280,- | ||
}} | }} |
Latest revision as of 15:10, 28 July 2015
Short description: | p@chr20:48841260..48841280, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:48841260..48841280, - |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.37e-46 | 76 |
bone element | 3.20e-42 | 82 |
hematopoietic system | 1.40e-40 | 98 |
blood island | 1.40e-40 | 98 |
skeletal element | 4.81e-38 | 90 |
immune system | 1.16e-36 | 93 |
hemolymphoid system | 2.38e-36 | 108 |
skeletal system | 9.42e-34 | 100 |
musculoskeletal system | 3.70e-18 | 167 |
lateral plate mesoderm | 8.24e-17 | 203 |
connective tissue | 6.28e-12 | 371 |
mesoderm | 7.75e-09 | 315 |
mesoderm-derived structure | 7.75e-09 | 315 |
presumptive mesoderm | 7.75e-09 | 315 |