FFCP PHASE1:Hg19::chr20:55832876..55832881,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:55832876..55832881,- | |||
|description=CAGE_peak_at_chr20:55832876..55832881,- | |description=CAGE_peak_at_chr20:55832876..55832881,- | ||
|id=chr20:55832876..55832881,- | |id=chr20:55832876..55832881,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002253;5.93e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002253,6.94e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0005425;4.71e-17;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;3.32e-16;4!DOID:1612;3.32e-16;4!DOID:0060058;4.95e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,3.59e-16,4;DOID:1612,3.59e-16,4;DOID:0060058,3.89e-07,10 | |||
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|ontology_enrichment_uberon_v019=UBERON:0000941;4.71e-17;1!UBERON:0001785;4.71e-17;1!UBERON:0002464;4.71e-17;1!UBERON:0004904;4.71e-17;1!UBERON:0001021;4.71e-17;1!UBERON:0003714;3.43e-09;2!UBERON:0005162;3.43e-09;2!UBERON:0000122;3.43e-09;2!UBERON:0000310;4.95e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,4.72e-17,1;UBERON:0001785,4.72e-17,1;UBERON:0002464,4.72e-17,1;UBERON:0004904,4.72e-17,1;UBERON:0001021,4.72e-17,1;UBERON:0003902,4.72e-17,1;UBERON:0005425,4.72e-17,1;UBERON:0003714,3.43e-09,2;UBERON:0005162,3.43e-09,2;UBERON:0000122,3.43e-09,2;UBERON:0000310,5.11e-07,10 | |||
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| ||
|short_description=p@chr20:55832876..55832881,- | |short_description=p@chr20:55832876..55832881,- | ||
}} | }} |
Latest revision as of 15:40, 28 July 2015
Short description: | p@chr20:55832876..55832881, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:55832876..55832881, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 6.94e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 4.72e-17 | 1 |
cranial nerve | 4.72e-17 | 1 |
nerve trunk | 4.72e-17 | 1 |
nerve connecting eye with brain | 4.72e-17 | 1 |
nerve | 4.72e-17 | 1 |
retinal neural layer | 4.72e-17 | 1 |
presumptive neural retina | 4.72e-17 | 1 |
neural tissue | 3.43e-09 | 2 |
multi cell component structure | 3.43e-09 | 2 |
neuron projection bundle | 3.43e-09 | 2 |
breast | 5.11e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 3.59e-16 | 4 |
breast cancer | 3.59e-16 | 4 |
lymphoma | 3.89e-07 | 10 |