FFCP PHASE1:Hg19::chr21:27277366..27277394,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr21:27277366..27277394,- | |||
|description=CAGE_peak_at_chr21:27277366..27277394,- | |description=CAGE_peak_at_chr21:27277366..27277394,- | ||
|id=chr21:27277366..27277394,- | |id=chr21:27277366..27277394,- | ||
|ontology_enrichment_celltype=CL:0002321!4.55e-07!248;CL:0000220!7.79e-07!246 | |ontology_enrichment_celltype=CL:0002321!4.55e-07!248;CL:0000220!7.79e-07!246 | ||
|ontology_enrichment_celltype_v019=CL:0002138;2.92e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0005020,4.99e-07,6;CL:0002138,4.99e-07,6;CL:0005022,4.99e-07,6 | |||
|ontology_enrichment_development_v019=CL:0005022;2.92e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!8.26e-12!659;UBERON:0001017!1.81e-11!82;UBERON:0005743!1.99e-11!86;UBERON:0000477!3.06e-11!286;UBERON:0004111!6.31e-11!241;UBERON:0003080!6.34e-11!42;UBERON:0002780!7.63e-11!41;UBERON:0001890!7.63e-11!41;UBERON:0006240!7.63e-11!41;UBERON:0002616!1.01e-10!59;UBERON:0001049!1.90e-10!57;UBERON:0005068!1.90e-10!57;UBERON:0006241!1.90e-10!57;UBERON:0007135!1.90e-10!57;UBERON:0002020!2.11e-10!34;UBERON:0003528!2.11e-10!34;UBERON:0001893!2.30e-10!34;UBERON:0000467!3.50e-10!625;UBERON:0000955!4.43e-10!69;UBERON:0006238!4.43e-10!69;UBERON:0002791!5.09e-10!33;UBERON:0000480!5.92e-10!626;UBERON:0001869!9.24e-10!32;UBERON:0000073!2.22e-09!94;UBERON:0001016!2.22e-09!94;UBERON:0002619!3.25e-09!22;UBERON:0001950!5.13e-09!20;UBERON:0000119!9.36e-09!312;UBERON:0000922!1.27e-08!612;UBERON:0000483!1.32e-08!309;UBERON:0000481!1.76e-08!347;UBERON:0000475!4.84e-08!365;UBERON:0000956!4.85e-08!25;UBERON:0000203!4.85e-08!25;UBERON:0000924!6.89e-08!173;UBERON:0006601!6.89e-08!173;UBERON:0003056!6.92e-08!61;UBERON:0004121!9.93e-08!169;UBERON:0000033!1.28e-07!123;UBERON:0000025!1.61e-07!194;UBERON:0002050!1.88e-07!605;UBERON:0005423!1.88e-07!605;UBERON:0000923!1.95e-07!604;UBERON:0005291!1.95e-07!604;UBERON:0006598!1.95e-07!604;UBERON:0002532!1.95e-07!604;UBERON:0000062!2.32e-07!511;UBERON:0002346!3.01e-07!90;UBERON:0003075!3.90e-07!86;UBERON:0007284!3.90e-07!86;UBERON:0007023!7.78e-07!115;UBERON:0000153!8.20e-07!129;UBERON:0007811!8.20e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;1.04e-09;20!UBERON:0002619;1.72e-08;22!UBERON:0002791;6.72e-08;32!UBERON:0001869;1.70e-07;32!UBERON:0001893;2.01e-07;34!UBERON:0003528;4.81e-07;34!UBERON:0002020;4.81e-07;34!UBERON:0000956;4.87e-07;25!UBERON:0000203;4.87e-07;25!UBERON:0002021;9.75e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,4.27e-09,20;UBERON:0004111,1.68e-08,240;UBERON:0002780,4.88e-08,41;UBERON:0001890,4.88e-08,41;UBERON:0003080,4.88e-08,41;UBERON:0006240,4.88e-08,41;UBERON:0003528,5.77e-08,34;UBERON:0002020,5.77e-08,34;UBERON:0002619,5.96e-08,22;UBERON:0010371,6.22e-08,104;UBERON:0001893,7.75e-08,34;UBERON:0001049,8.06e-08,56;UBERON:0005068,8.06e-08,56;UBERON:0006241,8.06e-08,56;UBERON:0007135,8.06e-08,56;UBERON:0002791,1.08e-07,32;UBERON:0001869,1.34e-07,32;UBERON:0001017,5.17e-07,81;UBERON:0000073,7.01e-07,53;UBERON:0002616,7.01e-07,53 | |||
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| ||
|short_description=p@chr21:27277366..27277394,- | |short_description=p@chr21:27277366..27277394,- | ||
}} | }} |
Latest revision as of 17:01, 28 July 2015
Short description: | p@chr21:27277366..27277394, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:27277366..27277394, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 4.99e-07 | 6 |
endothelial cell of lymphatic vessel | 4.99e-07 | 6 |
vascular lymphangioblast | 4.99e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
neocortex | 4.27e-09 | 20 |
anatomical conduit | 1.68e-08 | 240 |
regional part of forebrain | 4.88e-08 | 41 |
forebrain | 4.88e-08 | 41 |
anterior neural tube | 4.88e-08 | 41 |
future forebrain | 4.88e-08 | 41 |
brain grey matter | 5.77e-08 | 34 |
gray matter | 5.77e-08 | 34 |
regional part of cerebral cortex | 5.96e-08 | 22 |
ecto-epithelium | 6.22e-08 | 104 |
telencephalon | 7.75e-08 | 34 |
neural tube | 8.06e-08 | 56 |
neural rod | 8.06e-08 | 56 |
future spinal cord | 8.06e-08 | 56 |
neural keel | 8.06e-08 | 56 |
regional part of telencephalon | 1.08e-07 | 32 |
cerebral hemisphere | 1.34e-07 | 32 |
central nervous system | 5.17e-07 | 81 |
regional part of nervous system | 7.01e-07 | 53 |
regional part of brain | 7.01e-07 | 53 |