FFCP PHASE1:Hg19::chr2:113984787..113984806,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:113984787..113984806,- | |||
|description=CAGE_peak_at_chr2:113984787..113984806,- | |description=CAGE_peak_at_chr2:113984787..113984806,- | ||
|id=chr2:113984787..113984806,- | |id=chr2:113984787..113984806,- | ||
|ontology_enrichment_celltype=CL:1000497!2.94e-09!18;CL:0002518!2.94e-09!18;CL:1000507!6.55e-09!12;CL:1000494!6.55e-09!12;CL:1000449!2.09e-08!16 | |ontology_enrichment_celltype=CL:1000497!2.94e-09!18;CL:0002518!2.94e-09!18;CL:1000507!6.55e-09!12;CL:1000494!6.55e-09!12;CL:1000449!2.09e-08!16 | ||
|ontology_enrichment_celltype_v019=CL:0002567;6.78e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,8.29e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0007123;4.28e-17;5!UBERON:0007297;3.34e-11;2 | |||
|ontology_enrichment_disease=DOID:120!3.96e-13!27;DOID:193!5.62e-12!29;DOID:2394!6.94e-07!14 | |ontology_enrichment_disease=DOID:120!3.96e-13!27;DOID:193!5.62e-12!29;DOID:2394!6.94e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:4468;3.34e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,2.47e-11,2 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001301;5.16e-21;1!UBERON:0002046;4.28e-17;5!UBERON:0002113;4.31e-08;24!UBERON:0011143;4.31e-08;24!UBERON:0006947;6.78e-08;3!UBERON:0004054;6.78e-08;3!UBERON:0000489;8.59e-07;29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,6.31e-21,1;UBERON:0002046,4.28e-17,5;UBERON:0004117,4.28e-17,5;UBERON:0007689,4.28e-17,5;UBERON:0007123,4.28e-17,5;UBERON:0003091,4.28e-17,5;UBERON:0002113,1.40e-12,26;UBERON:0003918,1.40e-12,26;UBERON:0011143,1.40e-12,26;UBERON:0005095,1.40e-12,26;UBERON:0007687,1.40e-12,26;UBERON:0006555,9.40e-12,16;UBERON:0004819,9.40e-12,16;UBERON:0005103,7.67e-11,8;UBERON:0000083,7.67e-11,8;UBERON:0009201,7.67e-11,8;UBERON:0006553,7.67e-11,8;UBERON:0003074,7.67e-11,8;UBERON:0003060,7.67e-11,8;UBERON:0000489,1.31e-10,31;UBERON:0000080,9.65e-10,9;UBERON:0002120,9.65e-10,9;UBERON:0004875,9.65e-10,9;UBERON:0005721,9.65e-10,9;UBERON:0005754,9.65e-10,9;UBERON:0007297,9.65e-10,9;UBERON:0009722,2.72e-08,11;UBERON:0007690,2.72e-08,11;UBERON:0004876,3.90e-08,11;UBERON:0006947,7.26e-08,3;UBERON:0004054,7.26e-08,3;UBERON:0003887,1.57e-07,12;UBERON:0006554,4.20e-07,47;UBERON:0001008,5.83e-07,48 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,1.17217447210047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0,0,0,0,0,0.601892199455438,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.902399225814824,0.308061348417659,0,1.46139224653261,0.211103257785751,0,0,0,1.54227252690289,0.541892875087706,0,0.764628819135115,0,0.223874754722178,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11486539543521,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0.0986434056369336,0,0,0.969332746095218,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89898258075224,0.163232808159148,0,0,0,0.0884575645033392,0,0,0.123563938946503,0.104421949505455,0,0,0,0,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0.284609546029793,0,1.56203764501618,0,0.0870592065804026,1.39781334593624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36417121897595,0.629455057619977,0,0,0,0,0,0,0,0,0.653174720218818,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303298235083296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0.155262956876259,0,0.265841714557995,0.521745061811734,0.150257608997218,0,0,0,0.107410557042488,0,0,0,0.686791410365586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0.327609848846413,0.737318726261158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0.225630985047772,0.20170506870352,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0,0,0,0,0,0.47775168788705,0,0,0,0,0,0,0,0,0,0.118332000730565,0.170426809518315,0.423387050190929,0.22910686854405,0.62041277132864,0,0.559277158988962,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250707539292375,0.227336094654718,0,0,0,0,0.23806443146374,0.0645889098360061,0,0.224263725161227,2.73682780596109,0.808468755832877,0,0,0,0,0,0,0.426909383510862,0,0,0,0,0,0,0.402547587182052,0 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|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,1.17217447210047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0,0,0,0,0,0.601892199455438,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.902399225814824,0.308061348417659,0,1.46139224653261,0.211103257785751,0,0,0,1.54227252690289,0.541892875087706,0,0.764628819135115,0,0.223874754722178,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11486539543521,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0.0986434056369336,0,0,0.969332746095218,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89898258075224,0.163232808159148,0,0,0,0.0884575645033392,0,0,0.123563938946503,0.104421949505455,0,0,0,0,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0.284609546029793,0,1.56203764501618,0,0.0870592065804026,1.39781334593624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36417121897595,0.629455057619977,0,0,0,0,0,0,0,0,0.653174720218818,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303298235083296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0.155262956876259,0,0.265841714557995,0.521745061811734,0.150257608997218,0,0,0,0.107410557042488,0,0,0,0.686791410365586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0.327609848846413,0.737318726261158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0.225630985047772,0.20170506870352,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0,0,0,0,0,0.47775168788705,0,0,0,0,0,0,0,0,0,0.118332000730565,0.170426809518315,0.423387050190929,0.22910686854405,0.62041277132864,0,0.559277158988962,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250707539292375,0.227336094654718,0,0,0,0,0.23806443146374,0.0645889098360061,0,0.224263725161227,2.73682780596109,0.808468755832877,0,0,0,0,0,0,0.426909383510862,0,0,0,0,0,0,0.402547587182052,0 | ||
|short_description=p@chr2:113984787..113984806,- | |short_description=p@chr2:113984787..113984806,- | ||
}} | }} |
Latest revision as of 23:37, 28 July 2015
Short description: | p@chr2:113984787..113984806, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:113984787..113984806, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 8.29e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
epididymis | 6.31e-21 | 1 |
thyroid gland | 4.28e-17 | 5 |
pharyngeal pouch | 4.28e-17 | 5 |
thyroid diverticulum | 4.28e-17 | 5 |
pharyngeal pouch 2 | 4.28e-17 | 5 |
thyroid primordium | 4.28e-17 | 5 |
kidney | 1.40e-12 | 26 |
kidney mesenchyme | 1.40e-12 | 26 |
upper urinary tract | 1.40e-12 | 26 |
kidney rudiment | 1.40e-12 | 26 |
kidney field | 1.40e-12 | 26 |
excretory tube | 9.40e-12 | 16 |
kidney epithelium | 9.40e-12 | 16 |
mesonephric epithelium | 7.67e-11 | 8 |
mesonephric tubule | 7.67e-11 | 8 |
nephric duct | 7.67e-11 | 8 |
renal duct | 7.67e-11 | 8 |
mesonephric duct | 7.67e-11 | 8 |
pronephric duct | 7.67e-11 | 8 |
cavitated compound organ | 1.31e-10 | 31 |
mesonephros | 9.65e-10 | 9 |
pronephros | 9.65e-10 | 9 |
nephrogenic cord | 9.65e-10 | 9 |
pronephric mesoderm | 9.65e-10 | 9 |
rostral part of nephrogenic cord | 9.65e-10 | 9 |
presumptive pronephric mesoderm | 9.65e-10 | 9 |
entire pharyngeal arch endoderm | 2.72e-08 | 11 |
early pharyngeal endoderm | 2.72e-08 | 11 |
urogenital ridge | 3.90e-08 | 11 |
male genital duct | 7.26e-08 | 3 |
internal male genitalia | 7.26e-08 | 3 |
intraembryonic coelom | 1.57e-07 | 12 |
urinary system structure | 4.20e-07 | 47 |
renal system | 5.83e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 2.47e-11 | 2 |