FFCP PHASE1:Hg19::chr2:133426077..133426103,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:133426077..133426103,- | |||
|description=CAGE_peak_at_chr2:133426077..133426103,- | |description=CAGE_peak_at_chr2:133426077..133426103,- | ||
|id=chr2:133426077..133426103,- | |id=chr2:133426077..133426103,- | ||
|ontology_enrichment_celltype=CL:0000128!3.67e-11!7;CL:0000126!3.67e-11!7;CL:0000127!3.67e-11!7;CL:0002453!3.67e-11!7;CL:0000133!6.56e-08!59;CL:0000333!3.99e-07!41;CL:0002319!9.10e-07!25 | |ontology_enrichment_celltype=CL:0000128!3.67e-11!7;CL:0000126!3.67e-11!7;CL:0000127!3.67e-11!7;CL:0002453!3.67e-11!7;CL:0000133!6.56e-08!59;CL:0000333!3.99e-07!41;CL:0002319!9.10e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000650;8.46e-24;2!CL:1000500;8.46e-24;2!CL:1000618;8.46e-24;2!CL:1001318;8.46e-24;2!CL:0002173;8.46e-24;2!CL:0002593;6.82e-23;2!CL:0002595;2.43e-20;5!CL:0000669;2.14e-12;4!CL:1000746;1.87e-07;7!CL:1000612;1.87e-07;7!CL:0000047;8.52e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000650,8.98e-24,2;CL:1000500,8.98e-24,2;CL:1000618,8.98e-24,2;CL:1001318,8.98e-24,2;CL:0002173,8.98e-24,2;CL:0002593,6.84e-23,2;CL:0002595,2.13e-20,5;CL:0000669,2.20e-12,4;CL:1000746,1.90e-07,7;CL:1000612,1.90e-07,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3571;1.11e-12;1!DOID:3350;5.73e-07;2!DOID:3193;8.52e-07;2!DOID:962;8.52e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3571,1.11e-12,1;DOID:3350,5.73e-07,2 | |||
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| ||
|short_description=p@chr2:133426077..133426103,- | |short_description=p@chr2:133426077..133426103,- | ||
}} | }} |
Latest revision as of 00:26, 29 July 2015
Short description: | p@chr2:133426077..133426103, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:133426077..133426103, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesangial cell | 8.98e-24 | 2 |
kidney interstitial cell | 8.98e-24 | 2 |
juxtaglomerular complex cell | 8.98e-24 | 2 |
renal interstitial pericyte | 8.98e-24 | 2 |
extraglomerular mesangial cell | 8.98e-24 | 2 |
smooth muscle cell of the internal thoracic artery | 6.84e-23 | 2 |
smooth muscle cell of the subclavian artery | 2.13e-20 | 5 |
pericyte cell | 2.20e-12 | 4 |
glomerular cell | 1.90e-07 | 7 |
kidney corpuscule cell | 1.90e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
abdomen connective tissue | 8.98e-24 | 2 |
abdominal segment connective tissue | 8.98e-24 | 2 |
trunk connective tissue | 8.98e-24 | 2 |
interstitial tissue | 8.98e-24 | 2 |
extraglomerular mesangium | 8.98e-24 | 2 |
kidney interstitium | 8.98e-24 | 2 |
juxtaglomerular apparatus | 8.98e-24 | 2 |
mesangium | 8.98e-24 | 2 |
internal thoracic artery | 6.84e-23 | 2 |
thoracic segment blood vessel | 2.13e-20 | 5 |
subclavian artery | 2.13e-20 | 5 |
trunk blood vessel | 9.34e-15 | 7 |
stroma | 2.20e-12 | 4 |
nucleus accumbens | 3.85e-12 | 1 |
ventral striatum | 3.85e-12 | 1 |
limbic system | 9.28e-10 | 5 |
systemic artery | 2.44e-08 | 33 |
systemic arterial system | 2.44e-08 | 33 |
primitive nephron | 1.90e-07 | 7 |
renal glomerulus | 1.90e-07 | 7 |
renal corpuscle | 1.90e-07 | 7 |
glomerular capsule | 1.90e-07 | 7 |
metanephric mesenchyme | 1.90e-07 | 7 |
glomerular tuft | 1.90e-07 | 7 |
S-shaped body | 1.90e-07 | 7 |
renal vesicle | 1.90e-07 | 7 |
comma-shaped body | 1.90e-07 | 7 |
Ammon's horn | 6.42e-07 | 2 |
lobe parts of cerebral cortex | 6.42e-07 | 2 |
hippocampal formation | 6.42e-07 | 2 |
limbic lobe | 6.42e-07 | 2 |
nervous system | 8.69e-07 | 89 |
Ontology term | p-value | n |
---|---|---|
liver cancer | 1.11e-12 | 1 |
mesenchymal cell neoplasm | 5.73e-07 | 2 |