FFCP PHASE1:Hg19::chr2:181988620..181988686,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:181988620..181988686,+
|short_description=p1@ENST00000424655,p1@ENST00000428474
|description=CAGE_peak_1_at_ENST00000424655_5end,CAGE_peak_1_at_ENST00000428...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000424655,ENST00000428474_5end | |||
|cluster_id=chr2:181988620..181988686,+ | |||
|coexpression_cluster_id=C2513 | |||
|description=CAGE_peak_1_at_ENST00000424655_5end,CAGE_peak_1_at_ENST00000428474_5end | |||
|id=chr2:181988620..181988686,+ | |||
|ontology_enrichment_celltype=CL:0000542!4.13e-30!53;CL:0000051!4.13e-30!53;CL:0000838!1.12e-29!52;CL:0000988!3.18e-21!182;CL:0000037!1.36e-20!172;CL:0000566!1.36e-20!172;CL:0000084!8.04e-20!25;CL:0000827!8.04e-20!25;CL:0002032!1.34e-18!165;CL:0000837!1.34e-18!165;CL:0000791!3.27e-18!18;CL:0000789!3.27e-18!18;CL:0002420!3.27e-18!18;CL:0002419!3.27e-18!18;CL:0000790!3.27e-18!18;CL:0000738!7.57e-17!140;CL:0002087!3.19e-16!119;CL:0002031!2.55e-12!124;CL:0000625!4.19e-12!11;CL:0000945!2.57e-09!24;CL:0000826!2.57e-09!24;CL:0000080!2.92e-07!6;CL:0000624!9.21e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000084;5.32e-36;25!CL:0000791;4.74e-32;18!CL:0000789;4.74e-32;18!CL:0002419;4.74e-32;18!CL:0000542;3.34e-24;53!CL:0000625;7.33e-21;11!CL:0000624;4.62e-11;6!CL:0000945;2.61e-10;24!CL:0002087;8.72e-09;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,2.75e-46,52;CL:0000542,3.62e-45,53;CL:0000051,3.62e-45,53;CL:0000084,4.98e-36,25;CL:0000827,4.98e-36,25;CL:0000791,4.56e-32,18;CL:0000789,4.56e-32,18;CL:0002420,4.56e-32,18;CL:0002419,4.56e-32,18;CL:0000790,4.56e-32,18;CL:0000988,2.25e-25,177;CL:0000738,3.11e-24,136;CL:0000037,8.07e-24,168;CL:0002087,1.17e-23,115;CL:0002032,3.82e-21,161;CL:0000837,3.82e-21,161;CL:0000625,7.51e-21,11;CL:0002031,1.44e-18,120;CL:0000624,4.35e-11,6;CL:0000945,2.67e-10,24;CL:0000826,2.67e-10,24;CL:0000236,1.07e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000790;4.74e-32;18!CL:0000051;3.34e-24;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.23e-14!15;UBERON:0000179!1.23e-14!15;UBERON:0000463!1.23e-14!15;UBERON:0007023!1.71e-09!115;UBERON:0004177!5.59e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.41e-25;15!UBERON:0000179;1.41e-25;15!UBERON:0000463;1.41e-25;15!UBERON:0002390;4.01e-17;32!UBERON:0002193;3.33e-10;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.69e-25,15;UBERON:0000179,1.69e-25,15;UBERON:0000463,1.69e-25,15;UBERON:0004177,1.17e-09,7;UBERON:0005057,1.17e-09,7;UBERON:0002370,5.99e-09,4;UBERON:0005058,5.99e-09,4;UBERON:0009113,5.99e-09,4;UBERON:0003295,5.99e-09,4;UBERON:0005562,5.99e-09,4;UBERON:0002390,8.28e-07,98;UBERON:0003061,8.28e-07,98;UBERON:0002193,8.92e-07,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0,0.125542639594803,2.90370941842215,3.85872770414745,6.29686250509434,1.96682138424452,4.98978217526377,1.85779347979291,0,0,0,0.0774672005803016,0.284338464974843,0.293600439334847,1.66198622559563,1.80490002723128,1.73608696572681,1.11957737119962,4.21061765824673,1.03030227053675,0,0,0,0,0,0,0.28769239232215,0.256160706529101,0.236482229888585,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0.217188844705117,0.605399502633369,0,0,0,0,0,0,0.150176892841506,0,0,0,0,1.75996244461323,1.09227722252426,0,1.28019066769952,0.800791974072025,1.14950487990897,1.98313461835459,1.90810750907073,1.1384259382189,3.52342313622563,0.764546456250458,0,1.12101712596307,0.526768169550154,11.9992959769438,7.8602152549833,7.40165396398233,35.2763505274331,8.47397893247335,14.203434172042,11.6896037044747,32.9774952380114,5.30290633454707,8.19675409959398,7.85331204918545,13.0653146120189,13.5261721462273,25.3234373089661,23.766101529583,53.3237677752497,31.1401782640327,37.9907975887393,28.2245914273437,53.1420817251585,14.9455992504749,18.2122546105794,36.1818159587889,13.061181987288,22.1368374311182,16.1576847556224,24.0920190524436,32.6365858443767,18.7396089828519,21.3099526839615,13.1380479507367,15.3221124850797,9.89528724398977,14.9169135999283,0,0,0,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0.589405839739707,0,0,0,0.348259474598534,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0,0.132409180813219,0,0,0,0,0.24666754841716,0,0,0,0.302714855289863,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,4.85609409356116,0,0,0,0,0,0,0,0,0,0,0.469634776943287,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672786506072164,1.74384027533312,0.51336800074665,0.387815147273333,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0.205476322550383,0,15.8040053030873,14.3832454947407,10.7813787429759,8.59898343074314,0,0,0,0,0,0.749007023947182,2.99161459204025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.1316332800215,5.1771408196468,7.68438416184799,0,0,0,0.496215615637554,0,0,0.128139149255701,0,0.160853921143607,0,0,0,0,0,0.116210378459959,0,0.200506470303285,0,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0.501689773854853,0,0,0,0,0.261435451024901,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0.178064071293475,0.330569830721956,0,0.382838137483752,0,0,0,0,0,0,0,0,0.143124886741991,0,0.316379424718726,0.762520775695299,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0.202910376962704,0,0,0.143411352204052,0.196498082026242,0.35667105148125,0.709522128141196,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,8.11916174771471,7.64637207142375,6.26611905891579,9.05280746739598,10.6954191002411,7.78167973431261,7.02040868409549,5.55187623405989,0,0,0,0.371606350251437,0,5.62020562452471,2.8696729091188,4.59032554295478,0.383010740264733,0,0.324621940274555,2.24637742490767,0,0.626719583092093,0,0.677167111206413,0,0,0,0.687010689511529,0,0,0,0.19538809540204,0,4.92349595790849,9.46594874665941,9.9921590399346,19.7381807122989,0,0.73254089635947,0,0,0,0,0.296964680832639,0,0,0,0,1.48323486804084,0,0.597743964753209,12.7090601144328,0,0,8.36976677135272,0,0,0,0,1.38100767891707,2.3948309234694,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0.508507300585533,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.307801034015188,0,0,0,0,0,0,1.5991043280559,29.6360564767636,0.31396051279005,0.166211681900156,0,0,0,0,2.54298526368606,0,0,0,0,1.99052386215701,1.41532103205343,0.611030144933625,59.600746864805,42.8766868144365,46.1545016814113,0,0.802577647298789,0,0,0,0,0,1.20990716048664,0,0.442306057399416,0.150323419414493,0,0,0,0,0,0,0.277349346026277,0,0,0,0.34945333648406,0,0,0,0,0.484945082442097,0,0,0,0,0,0,0,1.49417096317547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0.169346664131569,0,0,0,0,0,0,0,0.0607495566580247,0,0.315222829196793,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0.410462603746695,0,0,0.146552233678082,0,0,0,0,0,2.66968531419237,0.471612915298998,1.65695622138878,1.9846640872478,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0.110929051536852,0.124192805882767,0,0,0.454947352624943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0.53168342911599,0.521745061811734,0,0.380805212168795,0,0,0.107410557042488,0,0,0.800055529326307,0,0,0,0,0,0,0.226705925512272,1.85217979459067,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0.664324201566815,1.14495775979091,0,0,0,37.9976052124367,0.106691729694141,6.37195424745018,0,0,0,0,0,0,0,0,0.169732529954025,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0.376051641746286,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0.992422356778588,0,0,0.535701835878287,0,0,0,0.0887023701626388,15.9022902826975,0,0.27187893190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| ||
|short_description=p1@ENST00000424655,p1@ENST00000428474 | |||
}} | }} |
Latest revision as of 03:56, 29 July 2015
Short description: | p1@ENST00000424655, p1@ENST00000428474 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000424655_5end, CAGE_peak_1_at_ENST00000428474_5end |
Coexpression cluster: | C2513_cord_mycosis_CD4_thymus_NK_chronic_CD8 |
Association with transcript: | 0bp_to_ENST00000424655, ENST00000428474_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 2.75e-46 | 52 |
lymphocyte | 3.62e-45 | 53 |
common lymphoid progenitor | 3.62e-45 | 53 |
T cell | 4.98e-36 | 25 |
pro-T cell | 4.98e-36 | 25 |
mature alpha-beta T cell | 4.56e-32 | 18 |
alpha-beta T cell | 4.56e-32 | 18 |
immature T cell | 4.56e-32 | 18 |
mature T cell | 4.56e-32 | 18 |
immature alpha-beta T cell | 4.56e-32 | 18 |
hematopoietic cell | 2.25e-25 | 177 |
leukocyte | 3.11e-24 | 136 |
hematopoietic stem cell | 8.07e-24 | 168 |
nongranular leukocyte | 1.17e-23 | 115 |
hematopoietic oligopotent progenitor cell | 3.82e-21 | 161 |
hematopoietic multipotent progenitor cell | 3.82e-21 | 161 |
CD8-positive, alpha-beta T cell | 7.51e-21 | 11 |
hematopoietic lineage restricted progenitor cell | 1.44e-18 | 120 |
CD4-positive, alpha-beta T cell | 4.35e-11 | 6 |
lymphocyte of B lineage | 2.67e-10 | 24 |
pro-B cell | 2.67e-10 | 24 |
B cell | 1.07e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
blood | 1.69e-25 | 15 |
haemolymphatic fluid | 1.69e-25 | 15 |
organism substance | 1.69e-25 | 15 |
hemopoietic organ | 1.17e-09 | 7 |
immune organ | 1.17e-09 | 7 |
thymus | 5.99e-09 | 4 |
hemolymphoid system gland | 5.99e-09 | 4 |
thymic region | 5.99e-09 | 4 |
pharyngeal gland | 5.99e-09 | 4 |
thymus primordium | 5.99e-09 | 4 |
hematopoietic system | 8.28e-07 | 98 |
blood island | 8.28e-07 | 98 |
hemolymphoid system | 8.92e-07 | 108 |