FFCP PHASE1:Hg19::chr2:202022689..202022706,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:202022689..202022706,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr2:202022689..202022706,+ | |description=CAGE_peak_at_chr2:202022689..202022706,+ | ||
|id=chr2:202022689..202022706,+ | |id=chr2:202022689..202022706,+ | ||
|ontology_enrichment_celltype=CL:0002057!2.08e-37!42;CL:0000860!3.20e-35!45;CL:0000766!1.52e-29!76;CL:0000557!7.13e-26!71;CL:0002009!6.00e-24!65;CL:0000839!2.10e-23!70;CL:0002194!4.43e-22!63;CL:0000576!4.43e-22!63;CL:0000040!4.43e-22!63;CL:0000559!4.43e-22!63;CL:0000763!5.42e-19!112;CL:0000049!5.42e-19!112;CL:0000738!2.84e-18!140;CL:0002031!2.42e-12!124;CL:0000037!1.94e-11!172;CL:0000566!1.94e-11!172;CL:0002087!3.34e-11!119;CL:0002032!8.28e-11!165;CL:0000837!8.28e-11!165;CL:0000988!9.70e-10!182 | |ontology_enrichment_celltype=CL:0002057!2.08e-37!42;CL:0000860!3.20e-35!45;CL:0000766!1.52e-29!76;CL:0000557!7.13e-26!71;CL:0002009!6.00e-24!65;CL:0000839!2.10e-23!70;CL:0002194!4.43e-22!63;CL:0000576!4.43e-22!63;CL:0000040!4.43e-22!63;CL:0000559!4.43e-22!63;CL:0000763!5.42e-19!112;CL:0000049!5.42e-19!112;CL:0000738!2.84e-18!140;CL:0002031!2.42e-12!124;CL:0000037!1.94e-11!172;CL:0000566!1.94e-11!172;CL:0002087!3.34e-11!119;CL:0002032!8.28e-11!165;CL:0000837!8.28e-11!165;CL:0000988!9.70e-10!182 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.93e-46;33!CL:0002057;3.93e-46;33!CL:0000473;6.28e-31;39!CL:0000234;6.28e-31;39!CL:0000576;4.54e-26;48!CL:0000766;7.76e-18;69!CL:0000763;3.78e-08;100!CL:0002328;2.42e-07;3!CL:0002087;3.02e-07;104!CL:0000226;3.74e-07;3!CL:0000842;3.74e-07;3!CL:0000094;4.29e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.83e-47,42;CL:0002057,3.83e-47,42;CL:0000473,4.73e-40,48;CL:0000234,4.73e-40,48;CL:0000766,3.05e-39,72;CL:0000557,3.55e-36,67;CL:0002009,1.32e-33,61;CL:0000839,4.47e-32,66;CL:0002194,3.74e-30,59;CL:0000576,3.74e-30,59;CL:0000040,3.74e-30,59;CL:0000559,3.74e-30,59;CL:0000763,1.01e-25,108;CL:0000049,1.01e-25,108;CL:0000738,7.27e-23,136;CL:0002031,7.86e-17,120;CL:0000037,3.29e-16,168;CL:0002087,2.07e-15,115;CL:0000988,8.73e-15,177;CL:0002032,1.83e-14,161;CL:0000837,1.83e-14,161;CL:0002328,2.54e-07,3;CL:0000226,2.60e-07,3;CL:0000842,2.60e-07,3;CL:0000094,4.36e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;8.65e-34;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!7.12e-22!80;UBERON:0002390!1.61e-19!102;UBERON:0003061!1.61e-19!102;UBERON:0001474!4.07e-19!86;UBERON:0002193!6.49e-17!112;UBERON:0002405!6.13e-15!115;UBERON:0004765!1.71e-14!101;UBERON:0001434!1.71e-14!101;UBERON:0001737!1.40e-09!9;UBERON:0001557!1.43e-09!19;UBERON:0000065!3.14e-09!53;UBERON:0001004!1.01e-07!72;UBERON:0000062!3.71e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.77e-14;9!UBERON:0001557;1.77e-14;9!UBERON:0004815;2.42e-07;3!UBERON:0002031;2.42e-07;3!UBERON:0000065;4.16e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.10e-30,76;UBERON:0001474,1.07e-27,82;UBERON:0002390,1.36e-27,98;UBERON:0003061,1.36e-27,98;UBERON:0002405,1.03e-24,93;UBERON:0004765,2.45e-24,90;UBERON:0002193,5.26e-24,108;UBERON:0001434,6.71e-21,100;UBERON:0001737,1.36e-14,9;UBERON:0001557,1.08e-11,19;UBERON:0003081,3.60e-09,203;UBERON:0002204,9.51e-09,167;UBERON:0000065,1.13e-08,54;UBERON:0000072,4.49e-08,47;UBERON:0004815,2.54e-07,3;UBERON:0002031,2.54e-07,3;UBERON:0008947,6.54e-07,38;UBERON:0003258,6.54e-07,38;UBERON:0001004,7.26e-07,74 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767658796194425,1.08371286321253,3.67768489791571,1.204823675113,4.80680213216824,0,0,0,5.53995408531877,14.2386557703801,16.2758153036889,0,0,0,2.32637182047304,0.755751887377619,3.39617685662943,14.4106002881524,16.8578834088949,82.3818946580976,14.6723120084297,11.2710710872804,49.6612682766029,125.142682107393,140.715661021274,272.207238054627,11.8592673911841,14.191119803008,48.0908256712481,126.106563656812,147.627352455003,374.012218592439,0.659702600373432,0.997318288108159,2.55734850319616,12.1887880224005,11.9150897185139,29.8954679517876,22.8636285383636,23.4667313289091,62.5503872750736,6.05399502633369,22.0966581592539,43.0388846919603,0.633765858935825,0.212604299965044,0.209658645508376,0.561643155732475,0.300353785683013,0.64290234678832,0,0.19891667719909,0,0,0,0,0.426730222566507,0,0,0,0,0,1.17447437874188,0.382273228125229,1.32171328579026,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,1.09288586487763,2.59549109949101,0.324547393654683,0,0,0.238490624305342,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.22462922052443,3.87780264148325,0.872188104285069,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298897361103602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0.828147600278907,1.85443159085912,1.68707720918437,2.97793726377464,2.17879444092406,3.32178866755535,2.15730093056263,3.92442930250692,3.07797725557112,0,0,0,0,0,0,0.590789906681404,0,0,0,0.658501712451753,5.62008766288098,0.804231779293047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268675568108545,1.45316969256981,0.383382679165211,7.38994856843915,0,5.59785911960085,0.720599767084807,1.00993946741104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0.112085143993527,0.197030760201927,0.215627574859517,0.77005821767849,0,0,0,0.167516265334349,0,5.99205619157746,5.9832291840805,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86091223510599,3.45142721309787,2.66818894508611,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,1.60405176242628,1.19705285616665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.26690225624989,0,0,1.72279661398852,0.650060246036521,0,0,0,0,0,0,0,0,0,1.4875642382488,0.576570202095319,6.50824833722379,0.4046311234222,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44333169088268,0.670302275535787,0,1.60044461320525,1.72202149068492,0,2.21715076768338,0.918893600827838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0.47748896947538,0,0,0,0,0,0,0,0.398495976502139,0.552567831062295,0,0,0,0,0.0898683511473268,2.86433879480975,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0.83654246567162,0.461701551022782,0,0,0,0,2.55200927785536,0,3.73124343213044,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0.176915129006678,0,0,0,0,0.134802265961354,0,0,0,0.19566461893209,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0.138674673013139,0,3.13575671726008,0,0,0,0,0,0.0821154570532092,0.484945082442097,0,0.225980740780532,0,0,0,0,0.0801588202515337,0.426905989478705,0,0,0,0,0,0,6.36373893465348,0,0,0,0,0,0,0,0.429765441419957,0,0,0,2.15361907373044,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,27.6717886608346,31.7258801368759,0,0,0,0.0524545881349981,0,7.35078091264664,0,0,0,0,0.542999601753713,0,0,0,0,0.170388021785422,0,0,1.32506888912221,0,0.79339561045614,0,0,0.106787412567695,0.314408610199332,0.414239055347196,0,0,0,0.638341257770182,0.544017803369474,1.0027595760908,0.612691153526923,0.327872630709804,0,0,0,0,0.573409195690071,0,0.124192805882767,0,0,0,0.285465333544967,0,0,0,0,0.467426619694449,0,0.189403005275089,0,0,0.228840068396924,1.20984739010591,0.310874401165561,0,0.318593534327405,0,0,0.414706207840855,0,0.521745061811734,0.150257608997218,0.761610424337591,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0.194860308839388,0.531459361253452,0.490696182767533,0,0,0,0,0.106691729694141,0,0,0,3.35710818526667,3.11038630016486,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0.781514011233092,0,0,0.443568258651136,0,0,0,0,0,0,0.992422356778588,0,0,1.07140367175657,0,0,0,0.177404740325278,0,0,0.271878931907327,0,0.472775363535873,0,0,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,6.42370108905414,0.51215543128185,2.07377898544228,0.860454717640555,0,0,0.846774100381858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0.392616934229891,0,0.4226557275834,0,0,0.580120991762195,0,0,0.705789743431384,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0.803892390468535,0,0,2.77204176471275,0,0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| ||
|short_description=p@chr2:202022689..202022706,+ | |short_description=p@chr2:202022689..202022706,+ | ||
}} | }} |
Latest revision as of 05:01, 29 July 2015
Short description: | p@chr2:202022689..202022706, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:202022689..202022706, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.83e-47 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.83e-47 | 42 |
defensive cell | 4.73e-40 | 48 |
phagocyte | 4.73e-40 | 48 |
myeloid leukocyte | 3.05e-39 | 72 |
granulocyte monocyte progenitor cell | 3.55e-36 | 67 |
macrophage dendritic cell progenitor | 1.32e-33 | 61 |
myeloid lineage restricted progenitor cell | 4.47e-32 | 66 |
monopoietic cell | 3.74e-30 | 59 |
monocyte | 3.74e-30 | 59 |
monoblast | 3.74e-30 | 59 |
promonocyte | 3.74e-30 | 59 |
myeloid cell | 1.01e-25 | 108 |
common myeloid progenitor | 1.01e-25 | 108 |
leukocyte | 7.27e-23 | 136 |
hematopoietic lineage restricted progenitor cell | 7.86e-17 | 120 |
hematopoietic stem cell | 3.29e-16 | 168 |
nongranular leukocyte | 2.07e-15 | 115 |
hematopoietic cell | 8.73e-15 | 177 |
hematopoietic oligopotent progenitor cell | 1.83e-14 | 161 |
hematopoietic multipotent progenitor cell | 1.83e-14 | 161 |
bronchial epithelial cell | 2.54e-07 | 3 |
single nucleate cell | 2.60e-07 | 3 |
mononuclear cell | 2.60e-07 | 3 |
granulocyte | 4.36e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.10e-30 | 76 |
bone element | 1.07e-27 | 82 |
hematopoietic system | 1.36e-27 | 98 |
blood island | 1.36e-27 | 98 |
immune system | 1.03e-24 | 93 |
skeletal element | 2.45e-24 | 90 |
hemolymphoid system | 5.26e-24 | 108 |
skeletal system | 6.71e-21 | 100 |
larynx | 1.36e-14 | 9 |
upper respiratory tract | 1.08e-11 | 19 |
lateral plate mesoderm | 3.60e-09 | 203 |
musculoskeletal system | 9.51e-09 | 167 |
respiratory tract | 1.13e-08 | 54 |
segment of respiratory tract | 4.49e-08 | 47 |
lower respiratory tract epithelium | 2.54e-07 | 3 |
epithelium of bronchus | 2.54e-07 | 3 |
respiratory primordium | 6.54e-07 | 38 |
endoderm of foregut | 6.54e-07 | 38 |
respiratory system | 7.26e-07 | 74 |