FFCP PHASE1:Hg19::chr2:202022689..202022706,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:202022689..202022706,+ | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_at_chr2:202022689..202022706,+ | |description=CAGE_peak_at_chr2:202022689..202022706,+ | ||
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|ontology_enrichment_celltype=CL:0002057!2.08e-37!42;CL:0000860!3.20e-35!45;CL:0000766!1.52e-29!76;CL:0000557!7.13e-26!71;CL:0002009!6.00e-24!65;CL:0000839!2.10e-23!70;CL:0002194!4.43e-22!63;CL:0000576!4.43e-22!63;CL:0000040!4.43e-22!63;CL:0000559!4.43e-22!63;CL:0000763!5.42e-19!112;CL:0000049!5.42e-19!112;CL:0000738!2.84e-18!140;CL:0002031!2.42e-12!124;CL:0000037!1.94e-11!172;CL:0000566!1.94e-11!172;CL:0002087!3.34e-11!119;CL:0002032!8.28e-11!165;CL:0000837!8.28e-11!165;CL:0000988!9.70e-10!182 | |ontology_enrichment_celltype=CL:0002057!2.08e-37!42;CL:0000860!3.20e-35!45;CL:0000766!1.52e-29!76;CL:0000557!7.13e-26!71;CL:0002009!6.00e-24!65;CL:0000839!2.10e-23!70;CL:0002194!4.43e-22!63;CL:0000576!4.43e-22!63;CL:0000040!4.43e-22!63;CL:0000559!4.43e-22!63;CL:0000763!5.42e-19!112;CL:0000049!5.42e-19!112;CL:0000738!2.84e-18!140;CL:0002031!2.42e-12!124;CL:0000037!1.94e-11!172;CL:0000566!1.94e-11!172;CL:0002087!3.34e-11!119;CL:0002032!8.28e-11!165;CL:0000837!8.28e-11!165;CL:0000988!9.70e-10!182 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.93e-46;33!CL:0002057;3.93e-46;33!CL:0000473;6.28e-31;39!CL:0000234;6.28e-31;39!CL:0000576;4.54e-26;48!CL:0000766;7.76e-18;69!CL:0000763;3.78e-08;100!CL:0002328;2.42e-07;3!CL:0002087;3.02e-07;104!CL:0000226;3.74e-07;3!CL:0000842;3.74e-07;3!CL:0000094;4.29e-07;8 | |ontology_enrichment_celltype_v019=CL:0000860;3.93e-46;33!CL:0002057;3.93e-46;33!CL:0000473;6.28e-31;39!CL:0000234;6.28e-31;39!CL:0000576;4.54e-26;48!CL:0000766;7.76e-18;69!CL:0000763;3.78e-08;100!CL:0002328;2.42e-07;3!CL:0002087;3.02e-07;104!CL:0000226;3.74e-07;3!CL:0000842;3.74e-07;3!CL:0000094;4.29e-07;8 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.83e-47,42;CL:0002057,3.83e-47,42;CL:0000473,4.73e-40,48;CL:0000234,4.73e-40,48;CL:0000766,3.05e-39,72;CL:0000557,3.55e-36,67;CL:0002009,1.32e-33,61;CL:0000839,4.47e-32,66;CL:0002194,3.74e-30,59;CL:0000576,3.74e-30,59;CL:0000040,3.74e-30,59;CL:0000559,3.74e-30,59;CL:0000763,1.01e-25,108;CL:0000049,1.01e-25,108;CL:0000738,7.27e-23,136;CL:0002031,7.86e-17,120;CL:0000037,3.29e-16,168;CL:0002087,2.07e-15,115;CL:0000988,8.73e-15,177;CL:0002032,1.83e-14,161;CL:0000837,1.83e-14,161;CL:0002328,2.54e-07,3;CL:0000226,2.60e-07,3;CL:0000842,2.60e-07,3;CL:0000094,4.36e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;8.65e-34;42 | |ontology_enrichment_development_v019=CL:0002057;8.65e-34;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!7.12e-22!80;UBERON:0002390!1.61e-19!102;UBERON:0003061!1.61e-19!102;UBERON:0001474!4.07e-19!86;UBERON:0002193!6.49e-17!112;UBERON:0002405!6.13e-15!115;UBERON:0004765!1.71e-14!101;UBERON:0001434!1.71e-14!101;UBERON:0001737!1.40e-09!9;UBERON:0001557!1.43e-09!19;UBERON:0000065!3.14e-09!53;UBERON:0001004!1.01e-07!72;UBERON:0000062!3.71e-07!511 | |ontology_enrichment_uberon=UBERON:0002371!7.12e-22!80;UBERON:0002390!1.61e-19!102;UBERON:0003061!1.61e-19!102;UBERON:0001474!4.07e-19!86;UBERON:0002193!6.49e-17!112;UBERON:0002405!6.13e-15!115;UBERON:0004765!1.71e-14!101;UBERON:0001434!1.71e-14!101;UBERON:0001737!1.40e-09!9;UBERON:0001557!1.43e-09!19;UBERON:0000065!3.14e-09!53;UBERON:0001004!1.01e-07!72;UBERON:0000062!3.71e-07!511 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.77e-14;9!UBERON:0001557;1.77e-14;9!UBERON:0004815;2.42e-07;3!UBERON:0002031;2.42e-07;3!UBERON:0000065;4.16e-07;44 | |ontology_enrichment_uberon_v019=UBERON:0001737;1.77e-14;9!UBERON:0001557;1.77e-14;9!UBERON:0004815;2.42e-07;3!UBERON:0002031;2.42e-07;3!UBERON:0000065;4.16e-07;44 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.10e-30,76;UBERON:0001474,1.07e-27,82;UBERON:0002390,1.36e-27,98;UBERON:0003061,1.36e-27,98;UBERON:0002405,1.03e-24,93;UBERON:0004765,2.45e-24,90;UBERON:0002193,5.26e-24,108;UBERON:0001434,6.71e-21,100;UBERON:0001737,1.36e-14,9;UBERON:0001557,1.08e-11,19;UBERON:0003081,3.60e-09,203;UBERON:0002204,9.51e-09,167;UBERON:0000065,1.13e-08,54;UBERON:0000072,4.49e-08,47;UBERON:0004815,2.54e-07,3;UBERON:0002031,2.54e-07,3;UBERON:0008947,6.54e-07,38;UBERON:0003258,6.54e-07,38;UBERON:0001004,7.26e-07,74 | |||
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| ||
|short_description=p@chr2:202022689..202022706,+ | |short_description=p@chr2:202022689..202022706,+ | ||
}} | }} |
Latest revision as of 05:01, 29 July 2015
Short description: | p@chr2:202022689..202022706, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:202022689..202022706, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.83e-47 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.83e-47 | 42 |
defensive cell | 4.73e-40 | 48 |
phagocyte | 4.73e-40 | 48 |
myeloid leukocyte | 3.05e-39 | 72 |
granulocyte monocyte progenitor cell | 3.55e-36 | 67 |
macrophage dendritic cell progenitor | 1.32e-33 | 61 |
myeloid lineage restricted progenitor cell | 4.47e-32 | 66 |
monopoietic cell | 3.74e-30 | 59 |
monocyte | 3.74e-30 | 59 |
monoblast | 3.74e-30 | 59 |
promonocyte | 3.74e-30 | 59 |
myeloid cell | 1.01e-25 | 108 |
common myeloid progenitor | 1.01e-25 | 108 |
leukocyte | 7.27e-23 | 136 |
hematopoietic lineage restricted progenitor cell | 7.86e-17 | 120 |
hematopoietic stem cell | 3.29e-16 | 168 |
nongranular leukocyte | 2.07e-15 | 115 |
hematopoietic cell | 8.73e-15 | 177 |
hematopoietic oligopotent progenitor cell | 1.83e-14 | 161 |
hematopoietic multipotent progenitor cell | 1.83e-14 | 161 |
bronchial epithelial cell | 2.54e-07 | 3 |
single nucleate cell | 2.60e-07 | 3 |
mononuclear cell | 2.60e-07 | 3 |
granulocyte | 4.36e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.10e-30 | 76 |
bone element | 1.07e-27 | 82 |
hematopoietic system | 1.36e-27 | 98 |
blood island | 1.36e-27 | 98 |
immune system | 1.03e-24 | 93 |
skeletal element | 2.45e-24 | 90 |
hemolymphoid system | 5.26e-24 | 108 |
skeletal system | 6.71e-21 | 100 |
larynx | 1.36e-14 | 9 |
upper respiratory tract | 1.08e-11 | 19 |
lateral plate mesoderm | 3.60e-09 | 203 |
musculoskeletal system | 9.51e-09 | 167 |
respiratory tract | 1.13e-08 | 54 |
segment of respiratory tract | 4.49e-08 | 47 |
lower respiratory tract epithelium | 2.54e-07 | 3 |
epithelium of bronchus | 2.54e-07 | 3 |
respiratory primordium | 6.54e-07 | 38 |
endoderm of foregut | 6.54e-07 | 38 |
respiratory system | 7.26e-07 | 74 |