FFCP PHASE1:Hg19::chr2:235244225..235244257,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:235244225..235244257,- | |||
|coexpression_cluster_id=C512 | |||
|description=CAGE_peak_at_chr2:235244225..235244257,- | |||
|id=chr2:235244225..235244257,- | |||
|ontology_enrichment_celltype=CL:0000738!1.17e-32!140;CL:0000037!2.39e-27!172;CL:0000566!2.39e-27!172;CL:0000766!3.35e-26!76;CL:0002031!1.64e-25!124;CL:0000988!1.69e-25!182;CL:0000557!2.95e-25!71;CL:0002057!4.72e-25!42;CL:0002032!6.62e-25!165;CL:0000837!6.62e-25!165;CL:0000860!3.63e-23!45;CL:0000763!3.86e-22!112;CL:0000049!3.86e-22!112;CL:0002393!6.23e-21!9;CL:0002397!6.23e-21!9;CL:0000839!2.21e-20!70;CL:0002009!1.98e-19!65;CL:0002087!2.79e-18!119;CL:0000767!9.06e-18!3;CL:0000623!3.77e-17!3;CL:0000825!3.77e-17!3;CL:0002194!2.47e-15!63;CL:0000576!2.47e-15!63;CL:0000040!2.47e-15!63;CL:0000559!2.47e-15!63;CL:0000134!1.20e-13!358;CL:0002320!2.97e-13!365;CL:0000219!7.30e-12!390;CL:0001014!7.64e-12!2;CL:0001016!7.64e-12!2;CL:0002274!7.96e-11!5;CL:0000457!7.96e-11!5;CL:0002191!7.96e-11!5;CL:0000097!7.96e-11!5;CL:0000831!7.96e-11!5;CL:0002028!7.96e-11!5;CL:0000048!3.39e-10!430;CL:0000453!4.47e-10!5;CL:0000723!5.85e-10!436;CL:0000034!1.19e-09!444;CL:0000094!6.23e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000767;6.04e-60;3!CL:0000097;2.13e-36;5!CL:0000094;4.94e-23;8!CL:0000163;1.37e-20;9!CL:0000081;5.86e-17;11!CL:0001014;2.35e-11;2!CL:0001016;2.35e-11;2!CL:0000623;7.50e-08;3!CL:0000766;8.35e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000767,3.65e-60,3;CL:0000097,2.26e-36,5;CL:0002028,2.26e-36,5;CL:0000094,4.10e-23,8;CL:0000163,1.42e-20,9;CL:0000766,4.69e-17,72;CL:0000081,5.12e-17,11;CL:0000763,2.39e-14,108;CL:0000049,2.39e-14,108;CL:0000738,4.83e-14,136;CL:0002032,8.36e-12,161;CL:0000837,8.36e-12,161;CL:0001014,2.47e-11,2;CL:0001016,2.47e-11,2;CL:0000037,2.70e-11,168;CL:0000988,1.07e-10,177;CL:0000557,2.04e-10,67;CL:0000623,7.26e-08,3;CL:0000825,7.26e-08,3;CL:0002031,9.23e-08,120;CL:0000839,1.71e-07,66 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.05e-24!80;UBERON:0001474!2.07e-22!86;UBERON:0002390!3.49e-22!102;UBERON:0003061!3.49e-22!102;UBERON:0004765!2.02e-20!101;UBERON:0001434!2.02e-20!101;UBERON:0002193!8.97e-20!112;UBERON:0002405!3.74e-19!115;UBERON:0002384!1.02e-12!375;UBERON:0002204!1.64e-10!167;UBERON:0003081!7.27e-09!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.47e-09,76;UBERON:0001474,1.64e-08,82;UBERON:0004765,9.46e-08,90;UBERON:0002405,1.69e-07,93;UBERON:0002390,4.13e-07,98;UBERON:0003061,4.13e-07,98;UBERON:0001434,5.76e-07,100 | |||
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|short_description=p@chr2:235244225..235244257,- | |||
}} | }} |
Latest revision as of 08:01, 29 July 2015
Short description: | p@chr2:235244225..235244257, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:235244225..235244257, - |
Coexpression cluster: | C512_Mast_immature_Basophils_CD14_CD34_Peripheral_Natural |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
basophil | 3.65e-60 | 3 |
mast cell | 2.26e-36 | 5 |
basophil mast progenitor cell | 2.26e-36 | 5 |
granulocyte | 4.10e-23 | 8 |
endocrine cell | 1.42e-20 | 9 |
myeloid leukocyte | 4.69e-17 | 72 |
blood cell | 5.12e-17 | 11 |
myeloid cell | 2.39e-14 | 108 |
common myeloid progenitor | 2.39e-14 | 108 |
leukocyte | 4.83e-14 | 136 |
hematopoietic oligopotent progenitor cell | 8.36e-12 | 161 |
hematopoietic multipotent progenitor cell | 8.36e-12 | 161 |
CD1a-positive Langerhans cell | 2.47e-11 | 2 |
immature CD1a-positive Langerhans cell | 2.47e-11 | 2 |
hematopoietic stem cell | 2.70e-11 | 168 |
hematopoietic cell | 1.07e-10 | 177 |
granulocyte monocyte progenitor cell | 2.04e-10 | 67 |
natural killer cell | 7.26e-08 | 3 |
pro-NK cell | 7.26e-08 | 3 |
hematopoietic lineage restricted progenitor cell | 9.23e-08 | 120 |
myeloid lineage restricted progenitor cell | 1.71e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.47e-09 | 76 |
bone element | 1.64e-08 | 82 |
skeletal element | 9.46e-08 | 90 |
immune system | 1.69e-07 | 93 |
hematopoietic system | 4.13e-07 | 98 |
blood island | 4.13e-07 | 98 |
skeletal system | 5.76e-07 | 100 |