FFCP PHASE1:Hg19::chr2:54649524..54649529,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:54649524..54649529,- | |||
|coexpression_cluster_id=C203 | |||
|description=CAGE_peak_at_chr2:54649524..54649529,- | |description=CAGE_peak_at_chr2:54649524..54649529,- | ||
|id=chr2:54649524..54649529,- | |id=chr2:54649524..54649529,- | ||
|ontology_enrichment_celltype=CL:0000037!8.33e-34!172;CL:0000566!8.33e-34!172;CL:0000988!1.02e-32!182;CL:0002032!6.47e-31!165;CL:0000837!6.47e-31!165;CL:0000738!4.23e-23!140;CL:0002031!2.23e-18!124;CL:0000763!2.14e-17!112;CL:0000049!2.14e-17!112;CL:0002087!1.36e-15!119;CL:0000791!6.55e-14!18;CL:0000789!6.55e-14!18;CL:0002420!6.55e-14!18;CL:0002419!6.55e-14!18;CL:0000790!6.55e-14!18;CL:0000838!2.76e-13!52;CL:0000542!6.01e-13!53;CL:0000051!6.01e-13!53;CL:0000625!7.07e-12!11;CL:0000623!2.93e-10!3;CL:0000825!2.93e-10!3;CL:0000134!4.20e-10!358;CL:0002320!1.15e-09!365;CL:0000767!1.20e-09!3;CL:0000084!2.03e-09!25;CL:0000827!2.03e-09!25;CL:0002274!4.07e-09!5;CL:0000457!4.07e-09!5;CL:0002191!4.07e-09!5;CL:0000097!4.07e-09!5;CL:0000831!4.07e-09!5;CL:0002028!4.07e-09!5;CL:0002150!2.50e-08!3;CL:0000861!2.50e-08!3;CL:0000766!2.72e-08!76;CL:0000219!3.88e-08!390;CL:0000557!5.43e-07!71;CL:0000034!8.87e-07!444 | |ontology_enrichment_celltype=CL:0000037!8.33e-34!172;CL:0000566!8.33e-34!172;CL:0000988!1.02e-32!182;CL:0002032!6.47e-31!165;CL:0000837!6.47e-31!165;CL:0000738!4.23e-23!140;CL:0002031!2.23e-18!124;CL:0000763!2.14e-17!112;CL:0000049!2.14e-17!112;CL:0002087!1.36e-15!119;CL:0000791!6.55e-14!18;CL:0000789!6.55e-14!18;CL:0002420!6.55e-14!18;CL:0002419!6.55e-14!18;CL:0000790!6.55e-14!18;CL:0000838!2.76e-13!52;CL:0000542!6.01e-13!53;CL:0000051!6.01e-13!53;CL:0000625!7.07e-12!11;CL:0000623!2.93e-10!3;CL:0000825!2.93e-10!3;CL:0000134!4.20e-10!358;CL:0002320!1.15e-09!365;CL:0000767!1.20e-09!3;CL:0000084!2.03e-09!25;CL:0000827!2.03e-09!25;CL:0002274!4.07e-09!5;CL:0000457!4.07e-09!5;CL:0002191!4.07e-09!5;CL:0000097!4.07e-09!5;CL:0000831!4.07e-09!5;CL:0002028!4.07e-09!5;CL:0002150!2.50e-08!3;CL:0000861!2.50e-08!3;CL:0000766!2.72e-08!76;CL:0000219!3.88e-08!390;CL:0000557!5.43e-07!71;CL:0000034!8.87e-07!444 | ||
|ontology_enrichment_celltype_v019=CL:0000623;3.84e-34;3!CL:0000791;4.79e-10;18!CL:0000789;4.79e-10;18!CL:0002419;4.79e-10;18!CL:0000625;1.25e-09;11!CL:0000084;2.77e-07;25!CL:0001014;9.01e-07;2!CL:0001016;9.01e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,2.45e-34,3;CL:0000825,2.45e-34,3;CL:0002032,2.17e-15,161;CL:0000837,2.17e-15,161;CL:0000037,1.16e-14,168;CL:0000988,8.21e-14,177;CL:0000791,5.09e-10,18;CL:0000789,5.09e-10,18;CL:0002420,5.09e-10,18;CL:0002419,5.09e-10,18;CL:0000790,5.09e-10,18;CL:0000838,7.93e-10,52;CL:0000542,1.25e-09,53;CL:0000051,1.25e-09,53;CL:0000625,1.34e-09,11;CL:0000084,2.89e-07,25;CL:0000827,2.89e-07,25;CL:0000763,4.14e-07,108;CL:0000049,4.14e-07,108 | |||
|ontology_enrichment_development_v019=CL:0000790;4.79e-10;18 | |||
|ontology_enrichment_disease=DOID:8692!2.16e-09!31;DOID:1240!5.72e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:9119;2.75e-12;1!DOID:8692;5.97e-12;31!DOID:1240;8.49e-10;39 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.06e-12,31;DOID:9119,2.20e-12,1;DOID:1240,5.13e-10,39;DOID:2531,1.46e-07,51;DOID:0060083,1.46e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!4.23e-09!102;UBERON:0003061!4.23e-09!102;UBERON:0002384!4.51e-09!375;UBERON:0002193!8.44e-08!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p@chr2:54649524..54649529,- | |short_description=p@chr2:54649524..54649529,- | ||
}} | }} |
Latest revision as of 10:48, 29 July 2015
Short description: | p@chr2:54649524..54649529, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:54649524..54649529, - |
Coexpression cluster: | C203_acute_NK_chronic_CD133_lymphoma_immature_Dendritic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 2.45e-34 | 3 |
pro-NK cell | 2.45e-34 | 3 |
hematopoietic oligopotent progenitor cell | 2.17e-15 | 161 |
hematopoietic multipotent progenitor cell | 2.17e-15 | 161 |
hematopoietic stem cell | 1.16e-14 | 168 |
hematopoietic cell | 8.21e-14 | 177 |
mature alpha-beta T cell | 5.09e-10 | 18 |
alpha-beta T cell | 5.09e-10 | 18 |
immature T cell | 5.09e-10 | 18 |
mature T cell | 5.09e-10 | 18 |
immature alpha-beta T cell | 5.09e-10 | 18 |
lymphoid lineage restricted progenitor cell | 7.93e-10 | 52 |
lymphocyte | 1.25e-09 | 53 |
common lymphoid progenitor | 1.25e-09 | 53 |
CD8-positive, alpha-beta T cell | 1.34e-09 | 11 |
T cell | 2.89e-07 | 25 |
pro-T cell | 2.89e-07 | 25 |
myeloid cell | 4.14e-07 | 108 |
common myeloid progenitor | 4.14e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.06e-12 | 31 |
acute myeloid leukemia | 2.20e-12 | 1 |
leukemia | 5.13e-10 | 39 |
hematologic cancer | 1.46e-07 | 51 |
immune system cancer | 1.46e-07 | 51 |