FFCP PHASE1:Hg19::chr2:74758077..74758089,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:74758077..74758089,- | |||
|coexpression_cluster_id=C1900 | |||
|description=CAGE_peak_at_chr2:74758077..74758089,- | |description=CAGE_peak_at_chr2:74758077..74758089,- | ||
|id=chr2:74758077..74758089,- | |id=chr2:74758077..74758089,- | ||
|ontology_enrichment_celltype=CL:0000738!2.74e-16!140;CL:0000988!1.93e-13!182;CL:0002031!5.76e-13!124;CL:0002032!3.65e-12!165;CL:0000837!3.65e-12!165;CL:0000037!4.88e-12!172;CL:0000566!4.88e-12!172;CL:0002087!1.08e-09!119;CL:0000542!1.29e-09!53;CL:0000051!1.29e-09!53;CL:0000840!1.93e-09!5;CL:0001029!1.93e-09!5;CL:0000838!9.82e-09!52;CL:0000990!1.42e-08!8;CL:0000623!3.67e-08!3;CL:0000825!3.67e-08!3;CL:0002274!4.59e-08!5;CL:0000457!4.59e-08!5;CL:0002191!4.59e-08!5;CL:0000097!4.59e-08!5;CL:0000831!4.59e-08!5;CL:0002028!4.59e-08!5;CL:0000451!7.24e-07!10;CL:0000080!8.59e-07!6 | |ontology_enrichment_celltype=CL:0000738!2.74e-16!140;CL:0000988!1.93e-13!182;CL:0002031!5.76e-13!124;CL:0002032!3.65e-12!165;CL:0000837!3.65e-12!165;CL:0000037!4.88e-12!172;CL:0000566!4.88e-12!172;CL:0002087!1.08e-09!119;CL:0000542!1.29e-09!53;CL:0000051!1.29e-09!53;CL:0000840!1.93e-09!5;CL:0001029!1.93e-09!5;CL:0000838!9.82e-09!52;CL:0000990!1.42e-08!8;CL:0000623!3.67e-08!3;CL:0000825!3.67e-08!3;CL:0002274!4.59e-08!5;CL:0000457!4.59e-08!5;CL:0002191!4.59e-08!5;CL:0000097!4.59e-08!5;CL:0000831!4.59e-08!5;CL:0002028!4.59e-08!5;CL:0000451!7.24e-07!10;CL:0000080!8.59e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0001014;2.01e-31;2!CL:0000771;2.01e-31;2!CL:0001016;2.01e-31;2!CL:0000097;1.74e-28;5!CL:0000163;3.79e-16;9!CL:0000081;3.01e-13;11!CL:0000453;3.33e-13;5!CL:0000840;3.66e-11;5!CL:0000094;1.34e-08;8!CL:0000990;9.68e-08;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,1.60e-31,2;CL:0001016,1.60e-31,2;CL:0000771,2.54e-31,2;CL:0000097,1.59e-28,5;CL:0002028,1.59e-28,5;CL:0000163,3.61e-16,9;CL:0000453,3.03e-13,5;CL:0000081,3.21e-13,11;CL:0000988,2.70e-11,177;CL:0000840,3.39e-11,5;CL:0001029,3.39e-11,5;CL:0000738,3.13e-10,136;CL:0000094,1.42e-08,8;CL:0002032,1.70e-08,161;CL:0000837,1.70e-08,161;CL:0000037,4.23e-08,168;CL:0000990,9.20e-08,8;CL:0002031,1.92e-07,120 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!9.64e-10!112;UBERON:0002390!9.19e-09!102;UBERON:0003061!9.19e-09!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;4.26e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.61e-07,98;UBERON:0003061,3.61e-07,98;UBERON:0002331,4.39e-07,10;UBERON:0000358,4.39e-07,10;UBERON:0000307,4.39e-07,10;UBERON:0000091,4.39e-07,10;UBERON:0000087,4.39e-07,10;UBERON:0007010,4.39e-07,10;UBERON:0007806,4.39e-07,10;UBERON:0008780,4.39e-07,10;UBERON:0005728,4.39e-07,10 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0.534893840235659,0.410502947249729,0.393553906568396,0,0,0.928896739896456,0.919421224478927,0,0,0,0.142169232487422,0,0.553995408531877,0.200544447470142,0.434021741431704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0.622822248995575,0,0,0,0,0,0,0,0.212604299965044,0.419317291016752,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,1.70763890732835,1.76171156811282,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0.174129737299267,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0,0,0,0,0,0,0,0,0,1.31780417436063,3.87780264148325,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0.117408694235822,0.433099343283221,0,0.190254152234598,0,0,0.246217006087397,0,0,0.93733833986777,0,0.141775097242386,0,0,0,0,0.088048434013226,3.31724984865235,3.89123874225796,5.0496973370552,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591092280605782,1.07813787429759,0.898401253958239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0.66866030566487,0,0,0,0,0.994147647766298,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.22694370229306,1.48276726735803,0.939797545549098,0,0,0,0,0,0,0,0,0,0.126373159256976,0.300646838828985,0,0,0.330991955875499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114536596165916,0,0,0,0,0.135904206073614,0,0.101998217636322,0,0.600420288709789,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,1.799791132412,3.0952078182318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0.5013797880454,0.306345576763462,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265729680626726,0,0,0,0,0.999936979274649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0.299823467774787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,0,0,0.124149428591716,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0.641136984606466 | |phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0.534893840235659,0.410502947249729,0.393553906568396,0,0,0.928896739896456,0.919421224478927,0,0,0,0.142169232487422,0,0.553995408531877,0.200544447470142,0.434021741431704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0.622822248995575,0,0,0,0,0,0,0,0.212604299965044,0.419317291016752,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,1.70763890732835,1.76171156811282,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0.174129737299267,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0,0,0,0,0,0,0,0,0,1.31780417436063,3.87780264148325,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0.117408694235822,0.433099343283221,0,0.190254152234598,0,0,0.246217006087397,0,0,0.93733833986777,0,0.141775097242386,0,0,0,0,0.088048434013226,3.31724984865235,3.89123874225796,5.0496973370552,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591092280605782,1.07813787429759,0.898401253958239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0.66866030566487,0,0,0,0,0.994147647766298,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.22694370229306,1.48276726735803,0.939797545549098,0,0,0,0,0,0,0,0,0,0.126373159256976,0.300646838828985,0,0,0.330991955875499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114536596165916,0,0,0,0,0.135904206073614,0,0.101998217636322,0,0.600420288709789,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,1.799791132412,3.0952078182318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0.5013797880454,0.306345576763462,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265729680626726,0,0,0,0,0.999936979274649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0.299823467774787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,0,0,0.124149428591716,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0.641136984606466 | ||
|short_description=p@chr2:74758077..74758089,- | |short_description=p@chr2:74758077..74758089,- | ||
}} | }} |
Latest revision as of 12:22, 29 July 2015
Short description: | p@chr2:74758077..74758089, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:74758077..74758089, - |
Coexpression cluster: | C1900_Mast_cord_immature_CD14_CD34_chronic_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 1.60e-31 | 2 |
immature CD1a-positive Langerhans cell | 1.60e-31 | 2 |
eosinophil | 2.54e-31 | 2 |
mast cell | 1.59e-28 | 5 |
basophil mast progenitor cell | 1.59e-28 | 5 |
endocrine cell | 3.61e-16 | 9 |
Langerhans cell | 3.03e-13 | 5 |
blood cell | 3.21e-13 | 11 |
hematopoietic cell | 2.70e-11 | 177 |
immature conventional dendritic cell | 3.39e-11 | 5 |
common dendritic progenitor | 3.39e-11 | 5 |
leukocyte | 3.13e-10 | 136 |
granulocyte | 1.42e-08 | 8 |
hematopoietic oligopotent progenitor cell | 1.70e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.70e-08 | 161 |
hematopoietic stem cell | 4.23e-08 | 168 |
conventional dendritic cell | 9.20e-08 | 8 |
hematopoietic lineage restricted progenitor cell | 1.92e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.61e-07 | 98 |
blood island | 3.61e-07 | 98 |
umbilical cord | 4.39e-07 | 10 |
blastocyst | 4.39e-07 | 10 |
blastula | 4.39e-07 | 10 |
bilaminar disc | 4.39e-07 | 10 |
inner cell mass | 4.39e-07 | 10 |
cleaving embryo | 4.39e-07 | 10 |
connecting stalk | 4.39e-07 | 10 |
inner cell mass derived epiblast | 4.39e-07 | 10 |
extraembryonic mesoderm | 4.39e-07 | 10 |